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The map label for this gene is yaeB [C]

Identifier: 85860386

GI number: 85860386

Start: 2558501

End: 2558992

Strand: Direct

Name: yaeB [C]

Synonym: SYN_01175

Alternate gene names: 85860386

Gene position: 2558501-2558992 (Clockwise)

Preceding gene: 85860385

Following gene: 85860387

Centisome position: 80.47

GC content: 52.24

Gene sequence:

>492_bases
ATGGAGGAAACTTTAATTATCTACAGGCCCATCGGCGTGATTCACAGCGAACATGTTGTTGCGGAACAAACACCGATCCA
GCCGGCATATGCCCGGGGATGCAGAGGACAGGCGGAAATATTCCCGGAATTCGCAGAGGGATTGCGTGACCTGGAAGGGT
TCTCCCATTTGTACCTGATTTATCATCTCCACCGGGTAGAGCCGTCACAGATGCTCGTCAAACCCTTTTTACAGAACGCC
ATCAGGGGAATTTTTGCGACCCGTGCGCCCTGCCGTCCCAATGCCATCGGGTTGAGCATTCTTGAACTTCTCCATCGCGA
AGGAAATGTTCTTTATCTCGACGGAATGGACATCCTGGACGGCACACCGCTGCTGGACATCAAACCCTACACGGCCAAAT
TCGACTTCGTTAAGACGACCCGCAACGGCTGGCAGGACGAGGTGGACGAAAAAGAAGCCAGAAAGTTAGGAAAGCGAGGC
TGTCAAAAATGA

Upstream 100 bases:

>100_bases
AAAATCCTATCTTGCACTGTTTTGATCTGCCGCAGTCGATGGCGGCACAGGACATTTAGAAAAAAGCAACCAGAACATCG
AACAGTCGAGGAACTCGGAT

Downstream 100 bases:

>100_bases
TGAAAGGATCGAAACCATGCTGACTTACGAATACGAATGTGAAATGTGCGGGTTGAGGTTTGAACGTCAGCAGGCCATTT
CGGAGGACCCGCTCACGGAA

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MEETLIIYRPIGVIHSEHVVAEQTPIQPAYARGCRGQAEIFPEFAEGLRDLEGFSHLYLIYHLHRVEPSQMLVKPFLQNA
IRGIFATRAPCRPNAIGLSILELLHREGNVLYLDGMDILDGTPLLDIKPYTAKFDFVKTTRNGWQDEVDEKEARKLGKRG
CQK

Sequences:

>Translated_163_residues
MEETLIIYRPIGVIHSEHVVAEQTPIQPAYARGCRGQAEIFPEFAEGLRDLEGFSHLYLIYHLHRVEPSQMLVKPFLQNA
IRGIFATRAPCRPNAIGLSILELLHREGNVLYLDGMDILDGTPLLDIKPYTAKFDFVKTTRNGWQDEVDEKEARKLGKRG
CQK
>Mature_163_residues
MEETLIIYRPIGVIHSEHVVAEQTPIQPAYARGCRGQAEIFPEFAEGLRDLEGFSHLYLIYHLHRVEPSQMLVKPFLQNA
IRGIFATRAPCRPNAIGLSILELLHREGNVLYLDGMDILDGTPLLDIKPYTAKFDFVKTTRNGWQDEVDEKEARKLGKRG
CQK

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

Organism=Homo sapiens, GI118600979, Length=142, Percent_Identity=38.0281690140845, Blast_Score=100, Evalue=8e-22,
Organism=Escherichia coli, GI1786393, Length=133, Percent_Identity=36.0902255639098, Blast_Score=84, Evalue=3e-18,
Organism=Drosophila melanogaster, GI45552503, Length=134, Percent_Identity=39.5522388059701, Blast_Score=92, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24586408, Length=134, Percent_Identity=39.5522388059701, Blast_Score=92, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 18573; Mature: 18573

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEETLIIYRPIGVIHSEHVVAEQTPIQPAYARGCRGQAEIFPEFAEGLRDLEGFSHLYLI
CCCCEEEEECCCHHCCCCEECCCCCCCHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHH
YHLHRVEPSQMLVKPFLQNAIRGIFATRAPCRPNAIGLSILELLHREGNVLYLDGMDILD
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEECCCHHCC
GTPLLDIKPYTAKFDFVKTTRNGWQDEVDEKEARKLGKRGCQK
CCCCEECCCCCCEEHHHHHCCCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MEETLIIYRPIGVIHSEHVVAEQTPIQPAYARGCRGQAEIFPEFAEGLRDLEGFSHLYLI
CCCCEEEEECCCHHCCCCEECCCCCCCHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHH
YHLHRVEPSQMLVKPFLQNAIRGIFATRAPCRPNAIGLSILELLHREGNVLYLDGMDILD
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEECCCHHCC
GTPLLDIKPYTAKFDFVKTTRNGWQDEVDEKEARKLGKRGCQK
CCCCEECCCCCCEEHHHHHCCCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]