| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860382
Identifier: 85860382
GI number: 85860382
Start: 2555785
End: 2556147
Strand: Direct
Name: 85860382
Synonym: SYN_01179
Alternate gene names: NA
Gene position: 2555785-2556147 (Clockwise)
Preceding gene: 85860381
Following gene: 85860383
Centisome position: 80.39
GC content: 52.62
Gene sequence:
>363_bases ATGATGAAAATTGCCGTGACATCCCAGGGCAGGGAACTAGATTCACCGGTTGACCCTCGCTTCGGCAGGGCCGCCTATAT TCTTATCGTGGATTCGGACACCTGGAGTTTCGATGTTCTTGACAACAAGGCGAATGTCAATTCGCTTAAAGGGGCGGGAA TCCAGGCCGCGGCCAACATACACAGCAAAGGCGCGGAGGTTCTGCTTACCGGTTTTTGCGGTCCAAATGCCTTTAAGACC TTGACGGCCGGCGGGATAAAAGTAGCCAATGACGCCTCCGGCACTATCAGAGAAGCGGTTAGATCGTTCCTTGACGGGAA GCTGACTTTCGCGGATCAGGCCAATGTAGAAGGAAATTGGTAA
Upstream 100 bases:
>100_bases AGATCAGACCTGTTGTTGAAGACCTTATCGCGGGAAGACTTCCCCAGATCGAGGATGACCAGGTCTGCGGCGGTGGCGGA CGCTGATCGAAGGGAGACGG
Downstream 100 bases:
>100_bases AAAAATTAACTTCTTCAAGAGGAGCCAAAGAAGGGTGCAGGGCATATGGCGAAGAGATGAGATCGCTTAGCGCCACAGGC CCTGTGCTTTTTGTAAATAC
Product: dinitrogenase iron-molybdenum cofactor protein
Products: NA
Alternate protein names: Dinitrogenase Iron-Molybdenum Cofactor Biosynthesis; Dinitrogenase Iron-Molybdenum Cofactor Protein; Dinitrogenase Iron-Molybdenum Cofactor Family Protein; Dinitrogenase Iron-Molybdenum Cofactor Domain Protein
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MMKIAVTSQGRELDSPVDPRFGRAAYILIVDSDTWSFDVLDNKANVNSLKGAGIQAAANIHSKGAEVLLTGFCGPNAFKT LTAGGIKVANDASGTIREAVRSFLDGKLTFADQANVEGNW
Sequences:
>Translated_120_residues MMKIAVTSQGRELDSPVDPRFGRAAYILIVDSDTWSFDVLDNKANVNSLKGAGIQAAANIHSKGAEVLLTGFCGPNAFKT LTAGGIKVANDASGTIREAVRSFLDGKLTFADQANVEGNW >Mature_120_residues MMKIAVTSQGRELDSPVDPRFGRAAYILIVDSDTWSFDVLDNKANVNSLKGAGIQAAANIHSKGAEVLLTGFCGPNAFKT LTAGGIKVANDASGTIREAVRSFLDGKLTFADQANVEGNW
Specific function: Unknown
COG id: COG1433
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12687; Mature: 12687
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKIAVTSQGRELDSPVDPRFGRAAYILIVDSDTWSFDVLDNKANVNSLKGAGIQAAANI CEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEECC HSKGAEVLLTGFCGPNAFKTLTAGGIKVANDASGTIREAVRSFLDGKLTFADQANVEGNW CCCCCEEEEEECCCCCCCEEEECCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCCC >Mature Secondary Structure MMKIAVTSQGRELDSPVDPRFGRAAYILIVDSDTWSFDVLDNKANVNSLKGAGIQAAANI CEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEECC HSKGAEVLLTGFCGPNAFKTLTAGGIKVANDASGTIREAVRSFLDGKLTFADQANVEGNW CCCCCEEEEEECCCCCCCEEEECCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA