| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860338
Identifier: 85860338
GI number: 85860338
Start: 2516916
End: 2517113
Strand: Direct
Name: 85860338
Synonym: SYN_03007
Alternate gene names: NA
Gene position: 2516916-2517113 (Clockwise)
Preceding gene: 85860323
Following gene: 85860339
Centisome position: 79.17
GC content: 44.95
Gene sequence:
>198_bases TTGGCTGCTCAGCTATTCGACCTGATTTTCACCCATCAGGCCTGCGCTCCTGAGAAAGAAGAAATCTGCCGCACAAACGA TTTGCCCGCAAATTTCACTCTTTTAAATTGGATTGAAGTCCGCACCAGCGACCCCTTCTGTAGAGATCTGACTTTCTCCT TTGACATAATCGCGGCAAACTTAATGTTTAAATCATGA
Upstream 100 bases:
>100_bases ACTCCAGAGTCGTATTCTCCATTAACTTAAACAGTTCCAAAGACAAGTGTTTTTGTTATCATGAACAATGAAGCCGCATA TTTCAGTTCAATAATTTCAA
Downstream 100 bases:
>100_bases AGGCTTACAGCAGGGGGTGTTGATTGATTGAATGATTTGAAGCTTCAATTGGAGATCAATGATGATCGCATTTATTGTGA TTCGAGGATTCCGGGAATGC
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 64
Protein sequence:
>65_residues MAAQLFDLIFTHQACAPEKEEICRTNDLPANFTLLNWIEVRTSDPFCRDLTFSFDIIAANLMFKS
Sequences:
>Translated_65_residues MAAQLFDLIFTHQACAPEKEEICRTNDLPANFTLLNWIEVRTSDPFCRDLTFSFDIIAANLMFKS >Mature_64_residues AAQLFDLIFTHQACAPEKEEICRTNDLPANFTLLNWIEVRTSDPFCRDLTFSFDIIAANLMFKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7486; Mature: 7354
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAQLFDLIFTHQACAPEKEEICRTNDLPANFTLLNWIEVRTSDPFCRDLTFSFDIIAAN CCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCEEHHHHEEEE LMFKS EEECC >Mature Secondary Structure AAQLFDLIFTHQACAPEKEEICRTNDLPANFTLLNWIEVRTSDPFCRDLTFSFDIIAAN CHHHHHHHHHCCCCCCCHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCEEHHHHEEEE LMFKS EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA