Click here to switch to the map view.

The map label for this gene is 85860262

Identifier: 85860262

GI number: 85860262

Start: 2448388

End: 2449182

Strand: Direct

Name: 85860262

Synonym: SYN_02503

Alternate gene names: NA

Gene position: 2448388-2449182 (Clockwise)

Preceding gene: 85860261

Following gene: 85860267

Centisome position: 77.01

GC content: 48.43

Gene sequence:

>795_bases
GTGAGGCCCCGGGCTGTCTCCACAGCCGTTGACAATATCTCTTTTCAATCTTTTATCCCCGTGTTAAAAATGAATTGTTG
CATACCCTTTATTCAAGGAGGACTGACTATGAAAAGATTTTGCAGATTACTGGTCTTATTCGGTTTAGTTGCTTTCCTTC
TTTTAGCCACGGCGCCAGCGGCGTCGGCACAGAAACCAGGGCCGTATATCGGGGTATTCGGGGGGCTTGCAATCCCTGAT
GATCTGCGGTGGGGATGGGGTGACTACTACGATGACTGGGGTTACGACGAAGACCCCGATGAAAGCTGGGCGCTCGGAGT
CAAATTTGGATATATATTCCCACAACTCAGCTACATGGCTTTCGAACTGGAGTATACCTGTCTGGGAGACCAGGATTATG
GTCAGACATGGTCCTATAGAAGATCAAACGGCGATCAGGTCATAGATAGCTACGACGGCGATTTCAGCGCCCACAACGTG
ATGGCCAACCTCCTGTTCCGTTATCCGTATGGCAGGGTCCACCCGTATGTGGGATTCGGCCTTGGCCTGTCGATGGGCAA
TATTACAGAAAAAGGAACACGCGAGGTTAATGGTCAGCTATATGATTCATACGACATCGATGAAGATGACGCGGCCTTCG
CGACTCAGTTTATTCTTGGAGTCAACTTTGAAATCGCACCGAACCTTTCCGCCGAACTCGCCTACAAATATTTTTACAGT
GAATACGACATAATCAATTATGATATTGAAGCGGAGGATCACCTGTTCACCCTGGGCCTCAACGTTCACTTTTAA

Upstream 100 bases:

>100_bases
GGGCTCAGGAAAAGATCCGGGCCTTGGAGGATGCCGGGGTCATTGTGGTAAGAAATCCCGCGGAAATCGGCGATATCGTG
GAAAGCGCACTCCATCTACG

Downstream 100 bases:

>100_bases
ACCTAACACACCTTTGAAAATGGATTTAAAAAAAGGAGAGTCGCTAAGGCCTCCTTTTTTTATTTTTTGCGCGCACGGCA
TGTATGCAAAAAAAAGACAG

Product: ompA-like protein

Products: NA

Alternate protein names: OmpA-Like Protein

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MRPRAVSTAVDNISFQSFIPVLKMNCCIPFIQGGLTMKRFCRLLVLFGLVAFLLLATAPAASAQKPGPYIGVFGGLAIPD
DLRWGWGDYYDDWGYDEDPDESWALGVKFGYIFPQLSYMAFELEYTCLGDQDYGQTWSYRRSNGDQVIDSYDGDFSAHNV
MANLLFRYPYGRVHPYVGFGLGLSMGNITEKGTREVNGQLYDSYDIDEDDAAFATQFILGVNFEIAPNLSAELAYKYFYS
EYDIINYDIEAEDHLFTLGLNVHF

Sequences:

>Translated_264_residues
MRPRAVSTAVDNISFQSFIPVLKMNCCIPFIQGGLTMKRFCRLLVLFGLVAFLLLATAPAASAQKPGPYIGVFGGLAIPD
DLRWGWGDYYDDWGYDEDPDESWALGVKFGYIFPQLSYMAFELEYTCLGDQDYGQTWSYRRSNGDQVIDSYDGDFSAHNV
MANLLFRYPYGRVHPYVGFGLGLSMGNITEKGTREVNGQLYDSYDIDEDDAAFATQFILGVNFEIAPNLSAELAYKYFYS
EYDIINYDIEAEDHLFTLGLNVHF
>Mature_264_residues
MRPRAVSTAVDNISFQSFIPVLKMNCCIPFIQGGLTMKRFCRLLVLFGLVAFLLLATAPAASAQKPGPYIGVFGGLAIPD
DLRWGWGDYYDDWGYDEDPDESWALGVKFGYIFPQLSYMAFELEYTCLGDQDYGQTWSYRRSNGDQVIDSYDGDFSAHNV
MANLLFRYPYGRVHPYVGFGLGLSMGNITEKGTREVNGQLYDSYDIDEDDAAFATQFILGVNFEIAPNLSAELAYKYFYS
EYDIINYDIEAEDHLFTLGLNVHF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29863; Mature: 29863

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPRAVSTAVDNISFQSFIPVLKMNCCIPFIQGGLTMKRFCRLLVLFGLVAFLLLATAPA
CCCCHHHHHHHCCCHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
ASAQKPGPYIGVFGGLAIPDDLRWGWGDYYDDWGYDEDPDESWALGVKFGYIFPQLSYMA
CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHCCEEEE
FELEYTCLGDQDYGQTWSYRRSNGDQVIDSYDGDFSAHNVMANLLFRYPYGRVHPYVGFG
EEEEEEEECCCCCCCCCCEECCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEE
LGLSMGNITEKGTREVNGQLYDSYDIDEDDAAFATQFILGVNFEIAPNLSAELAYKYFYS
CCCCCCCCCCCCCHHCCCEEEECCCCCCCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHC
EYDIINYDIEAEDHLFTLGLNVHF
CCEEEEEEECCCCEEEEEEEEECC
>Mature Secondary Structure
MRPRAVSTAVDNISFQSFIPVLKMNCCIPFIQGGLTMKRFCRLLVLFGLVAFLLLATAPA
CCCCHHHHHHHCCCHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
ASAQKPGPYIGVFGGLAIPDDLRWGWGDYYDDWGYDEDPDESWALGVKFGYIFPQLSYMA
CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHCCEEEE
FELEYTCLGDQDYGQTWSYRRSNGDQVIDSYDGDFSAHNVMANLLFRYPYGRVHPYVGFG
EEEEEEEECCCCCCCCCCEECCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEE
LGLSMGNITEKGTREVNGQLYDSYDIDEDDAAFATQFILGVNFEIAPNLSAELAYKYFYS
CCCCCCCCCCCCCHHCCCEEEECCCCCCCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHC
EYDIINYDIEAEDHLFTLGLNVHF
CCEEEEEEECCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA