| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860235
Identifier: 85860235
GI number: 85860235
Start: 2430489
End: 2430950
Strand: Direct
Name: 85860235
Synonym: SYN_01585
Alternate gene names: NA
Gene position: 2430489-2430950 (Clockwise)
Preceding gene: 85860233
Following gene: 85860236
Centisome position: 76.45
GC content: 40.48
Gene sequence:
>462_bases ATGGCATACAAAATGCTCATTACCGTTAAAAATCATTCATGGATAGACATGCGAGAAGTTGCGATCAGTATTATTTTTAT AACCTTTATTTTCTGTTCATTGGCTTTTGCTGAGGATCGGGCAGTCAAAGTGCATTCACAATCTGAACCGGCAAAGTCAG CAATCCTGAAGGTTGTAAAGATGAGGGCAACGGGCAGGATCATTGATATTACGGACACCACGCTGAAGATTGAACGTGTT ATTAAAGGAACCGTTGAACCATTTGAATTTCAATTGGAAAAACCAATAACAAAATTCAGGGTCGGCGACAAAGTTGTTGT CAGGTACATCACAAAAGATGAGAAAAACATCTTGAAAGAGATAATGCCGCAGCGGAAGCTTAATTCATCAAAAGAAATGG TGCAACCTCGAGTAAAATCGGCCGATTTGCCGCCTTTAAAAGGCTCGGCTCCCTTGAAATGA
Upstream 100 bases:
>100_bases CCCCAATCCTTCCTCTTTTTCTCAATCTTCCTTCTGCTGTACAATCCCAAATTACTCGCAGTTGCAGCATGTTACTTAAT TCCATGAATTTTTAAAGAAA
Downstream 100 bases:
>100_bases GTTTTTCCATGAATTGTCATGGATAGTAACCACTCCCTGAGGAGATGGTAAATTAAAAAAGTGGTAAAAGGAGAAAGATT ATGAAGAAGGCTATGTTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MAYKMLITVKNHSWIDMREVAISIIFITFIFCSLAFAEDRAVKVHSQSEPAKSAILKVVKMRATGRIIDITDTTLKIERV IKGTVEPFEFQLEKPITKFRVGDKVVVRYITKDEKNILKEIMPQRKLNSSKEMVQPRVKSADLPPLKGSAPLK
Sequences:
>Translated_153_residues MAYKMLITVKNHSWIDMREVAISIIFITFIFCSLAFAEDRAVKVHSQSEPAKSAILKVVKMRATGRIIDITDTTLKIERV IKGTVEPFEFQLEKPITKFRVGDKVVVRYITKDEKNILKEIMPQRKLNSSKEMVQPRVKSADLPPLKGSAPLK >Mature_152_residues AYKMLITVKNHSWIDMREVAISIIFITFIFCSLAFAEDRAVKVHSQSEPAKSAILKVVKMRATGRIIDITDTTLKIERVI KGTVEPFEFQLEKPITKFRVGDKVVVRYITKDEKNILKEIMPQRKLNSSKEMVQPRVKSADLPPLKGSAPLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17458; Mature: 17327
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYKMLITVKNHSWIDMREVAISIIFITFIFCSLAFAEDRAVKVHSQSEPAKSAILKVVK CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH MRATGRIIDITDTTLKIERVIKGTVEPFEFQLEKPITKFRVGDKVVVRYITKDEKNILKE HHCCCCEEEECCCHHHHHHHHHCCCCCHHHHHCCCHHHHCCCCHHEEHHHCCCHHHHHHH IMPQRKLNSSKEMVQPRVKSADLPPLKGSAPLK HCCHHHCCCCHHHHCCHHCCCCCCCCCCCCCCC >Mature Secondary Structure AYKMLITVKNHSWIDMREVAISIIFITFIFCSLAFAEDRAVKVHSQSEPAKSAILKVVK CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH MRATGRIIDITDTTLKIERVIKGTVEPFEFQLEKPITKFRVGDKVVVRYITKDEKNILKE HHCCCCEEEECCCHHHHHHHHHCCCCCHHHHHCCCHHHHCCCCHHEEHHHCCCHHHHHHH IMPQRKLNSSKEMVQPRVKSADLPPLKGSAPLK HCCHHHCCCCHHHHCCHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA