| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860227
Identifier: 85860227
GI number: 85860227
Start: 2426786
End: 2427151
Strand: Direct
Name: 85860227
Synonym: SYN_03019
Alternate gene names: NA
Gene position: 2426786-2427151 (Clockwise)
Preceding gene: 85860225
Following gene: 85860228
Centisome position: 76.33
GC content: 43.72
Gene sequence:
>366_bases TTGAACACATCATTTTACAAATCTGATCGGGTGCACTGGGGGATAGAACTCGTCAGGGTATCAAACATTCCTCCGTGGTG GCTTTATTTTTCCCGCCCCTGGCTGAGGGGAATCCGTACATATAAACCACTTTACCCTCCCAAAGACTTGTATTGGGACT ATCTGAACGGGAAAATATCAGATGAGCAATATCGGATTCGTTATCATATAAAGGTGTTAAGCAAGTTGAACCCTGAAAAG GTTTATCAGGACCTGGGACAGGACACTACAATCCTGTGTTTTTGTAAACAGGGAAACTTCTGTCATCGGGAGGTCATTGC CGAATGGTTTTATGATCATCTGGGAATTGAAGTGCCGGAACTGTAA
Upstream 100 bases:
>100_bases AAAAAATAAAAGAAAAGGATAAGCTCAATTCAAAAGACAGATCATTTTTTGTGCAGTTCGCCGGAAAACGCATAAGAATG CAACTGCAGGGGGGTAACAT
Downstream 100 bases:
>100_bases TTTGAACAACTAATCCTTCCTCTTATCCCTTTCGGCAAATTATTATTCCAGGTAATAATTTTCGCAGTAAAAAATCAGAA TTGACCCGATTGCAGGCCTC
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MNTSFYKSDRVHWGIELVRVSNIPPWWLYFSRPWLRGIRTYKPLYPPKDLYWDYLNGKISDEQYRIRYHIKVLSKLNPEK VYQDLGQDTTILCFCKQGNFCHREVIAEWFYDHLGIEVPEL
Sequences:
>Translated_121_residues MNTSFYKSDRVHWGIELVRVSNIPPWWLYFSRPWLRGIRTYKPLYPPKDLYWDYLNGKISDEQYRIRYHIKVLSKLNPEK VYQDLGQDTTILCFCKQGNFCHREVIAEWFYDHLGIEVPEL >Mature_121_residues MNTSFYKSDRVHWGIELVRVSNIPPWWLYFSRPWLRGIRTYKPLYPPKDLYWDYLNGKISDEQYRIRYHIKVLSKLNPEK VYQDLGQDTTILCFCKQGNFCHREVIAEWFYDHLGIEVPEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14747; Mature: 14747
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSFYKSDRVHWGIELVRVSNIPPWWLYFSRPWLRGIRTYKPLYPPKDLYWDYLNGKIS CCCCCCCCCCEEEEEEEEEECCCCCEEEEECCHHHHHHHHCCCCCCCHHHHHHCCCCEEC DEQYRIRYHIKVLSKLNPEKVYQDLGQDTTILCFCKQGNFCHREVIAEWFYDHLGIEVPE CCEEEEEEEEEHHHCCCHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCEECCC L C >Mature Secondary Structure MNTSFYKSDRVHWGIELVRVSNIPPWWLYFSRPWLRGIRTYKPLYPPKDLYWDYLNGKIS CCCCCCCCCCEEEEEEEEEECCCCCEEEEECCHHHHHHHHCCCCCCCHHHHHHCCCCEEC DEQYRIRYHIKVLSKLNPEKVYQDLGQDTTILCFCKQGNFCHREVIAEWFYDHLGIEVPE CCEEEEEEEEEHHHCCCHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCEECCC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA