| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is exeA [H]
Identifier: 85860161
GI number: 85860161
Start: 2367503
End: 2368603
Strand: Direct
Name: exeA [H]
Synonym: SYN_00778
Alternate gene names: 85860161
Gene position: 2367503-2368603 (Clockwise)
Preceding gene: 85860160
Following gene: 85860163
Centisome position: 74.47
GC content: 48.14
Gene sequence:
>1101_bases ATGTATGAGTCATTCTACGGTTTAAAGGAAAATCCCTTTCATCTTACGCCGGATCCCGCCTATCTCTTTATGAGTCGGGT CCACGAGGAAGCCTATACCCATCTGGAATACGCTGTTGTGGAAAACAAGGGATTCGTGGTGATTACGGGAGAGATCGGCT CAGGGAAAACGACGCTGATCAATGTTCTTTTGAGCAAAATCCAACAGAGCATCCAGGTGGGGGTGATCAACCAGACCCTG GTTCAGCCGACACAGTTCATCAAAATGATCTGTCAGGAATTCGAACTTCCCACCGATACCCGGGACAAGGCAGAACTGCT CGATCTTTTTCATGATTTTCTGTTACAGCAGTTTGCGCGGAGAAAGCGGGTTACCCTGATCATTGATGAAGCCCAGAACC TTCCGAATAACACATTGGAAGAGATCCGCATGCTCTCGAATCTGGAATCGGAAAAACACCACCTCATTCAGATGATGCTG GTCGGGCAGCCTGAGCTGAAATACAAACTGCGGCAGAAAAGACTGGAGCAGTTTGTTCAACGAGTCACGGTATATTGTCA TTTGAGCGGTCTGGACAAAGAAGAAACATCCCGGTATATCCATCATCGTCTTCAGGTCGCCGGCGCGGAAAAATCGGACA TATTCAGTGAGGAAGCCATTCAGGTCATTCATGAATATTCCCGCGGCATACCCCGTCTGATCAATATCCTGTGTGACGCG GCACTGGTCTATGGCTTTGCCGATGGACTTACGAACATCGAGAAGCATGTCATCGATGAAGTGATCGCAGAGCGAAAAGT GGGTGGAATTTTTCAGGATTACGCCGCGGAAGAAGCAAATGCCGTGTTTCCCGTTCCCGGACAAATAAAAGAGATTGAAC CTGAAACGGGTCAGCTTATTCAATCGGTGGAAAGTCGACTTCAGTTGCTGGAGAGTGTCGTAACGGATATCAATCAGCGC TTGAGCATCCTTTTTTCCCGTCGGGAGCAACAGGATGACAGGGTACTTCAACTCCTCAAAATGCTGAAGCAAAGCACGGA AAACCGCATGGAACTCATGGCGGAAATTCAGCTGCTCAAACAGCAGCAGAATTCGAATTAA
Upstream 100 bases:
>100_bases AACAACCCGGAGTGACCTGAAACGGACCTTCGAAATGCTGGGGGATAAACCGGTTATCGGAACCTTGCTCAACAAGTCCA GGGACTAAGGGATCATTCTC
Downstream 100 bases:
>100_bases CGACAATTTACCCACCTTTTTCAGGAATCCTGCTTGCACGCATCAGCCAATAAGCCGGCAATGTCTTTTCTGCATGCATT ACTCCGACAATCCAGGCTGT
Product: general secretion pathway protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MYESFYGLKENPFHLTPDPAYLFMSRVHEEAYTHLEYAVVENKGFVVITGEIGSGKTTLINVLLSKIQQSIQVGVINQTL VQPTQFIKMICQEFELPTDTRDKAELLDLFHDFLLQQFARRKRVTLIIDEAQNLPNNTLEEIRMLSNLESEKHHLIQMML VGQPELKYKLRQKRLEQFVQRVTVYCHLSGLDKEETSRYIHHRLQVAGAEKSDIFSEEAIQVIHEYSRGIPRLINILCDA ALVYGFADGLTNIEKHVIDEVIAERKVGGIFQDYAAEEANAVFPVPGQIKEIEPETGQLIQSVESRLQLLESVVTDINQR LSILFSRREQQDDRVLQLLKMLKQSTENRMELMAEIQLLKQQQNSN
Sequences:
>Translated_366_residues MYESFYGLKENPFHLTPDPAYLFMSRVHEEAYTHLEYAVVENKGFVVITGEIGSGKTTLINVLLSKIQQSIQVGVINQTL VQPTQFIKMICQEFELPTDTRDKAELLDLFHDFLLQQFARRKRVTLIIDEAQNLPNNTLEEIRMLSNLESEKHHLIQMML VGQPELKYKLRQKRLEQFVQRVTVYCHLSGLDKEETSRYIHHRLQVAGAEKSDIFSEEAIQVIHEYSRGIPRLINILCDA ALVYGFADGLTNIEKHVIDEVIAERKVGGIFQDYAAEEANAVFPVPGQIKEIEPETGQLIQSVESRLQLLESVVTDINQR LSILFSRREQQDDRVLQLLKMLKQSTENRMELMAEIQLLKQQQNSN >Mature_366_residues MYESFYGLKENPFHLTPDPAYLFMSRVHEEAYTHLEYAVVENKGFVVITGEIGSGKTTLINVLLSKIQQSIQVGVINQTL VQPTQFIKMICQEFELPTDTRDKAELLDLFHDFLLQQFARRKRVTLIIDEAQNLPNNTLEEIRMLSNLESEKHHLIQMML VGQPELKYKLRQKRLEQFVQRVTVYCHLSGLDKEETSRYIHHRLQVAGAEKSDIFSEEAIQVIHEYSRGIPRLINILCDA ALVYGFADGLTNIEKHVIDEVIAERKVGGIFQDYAAEEANAVFPVPGQIKEIEPETGQLIQSVESRLQLLESVVTDINQR LSILFSRREQQDDRVLQLLKMLKQSTENRMELMAEIQLLKQQQNSN
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3267
COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exeA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR002477 [H]
Pfam domain/function: PF00004 AAA; PF01471 PG_binding_1 [H]
EC number: NA
Molecular weight: Translated: 42238; Mature: 42238
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYESFYGLKENPFHLTPDPAYLFMSRVHEEAYTHLEYAVVENKGFVVITGEIGSGKTTLI CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCCHHHHH NVLLSKIQQSIQVGVINQTLVQPTQFIKMICQEFELPTDTRDKAELLDLFHDFLLQQFAR HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH RKRVTLIIDEAQNLPNNTLEEIRMLSNLESEKHHLIQMMLVGQPELKYKLRQKRLEQFVQ HCCEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RVTVYCHLSGLDKEETSRYIHHRLQVAGAEKSDIFSEEAIQVIHEYSRGIPRLINILCDA HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH ALVYGFADGLTNIEKHVIDEVIAERKVGGIFQDYAAEEANAVFPVPGQIKEIEPETGQLI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH QSVESRLQLLESVVTDINQRLSILFSRREQQDDRVLQLLKMLKQSTENRMELMAEIQLLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQQNSN HHHCCC >Mature Secondary Structure MYESFYGLKENPFHLTPDPAYLFMSRVHEEAYTHLEYAVVENKGFVVITGEIGSGKTTLI CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCCHHHHH NVLLSKIQQSIQVGVINQTLVQPTQFIKMICQEFELPTDTRDKAELLDLFHDFLLQQFAR HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH RKRVTLIIDEAQNLPNNTLEEIRMLSNLESEKHHLIQMMLVGQPELKYKLRQKRLEQFVQ HCCEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RVTVYCHLSGLDKEETSRYIHHRLQVAGAEKSDIFSEEAIQVIHEYSRGIPRLINILCDA HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH ALVYGFADGLTNIEKHVIDEVIAERKVGGIFQDYAAEEANAVFPVPGQIKEIEPETGQLI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH QSVESRLQLLESVVTDINQRLSILFSRREQQDDRVLQLLKMLKQSTENRMELMAEIQLLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQQNSN HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7961440 [H]