| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
Click here to switch to the map view.
The map label for this gene is yveL [H]
Identifier: 85860160
GI number: 85860160
Start: 2366663
End: 2367490
Strand: Direct
Name: yveL [H]
Synonym: SYN_00779
Alternate gene names: 85860160
Gene position: 2366663-2367490 (Clockwise)
Preceding gene: 85860159
Following gene: 85860161
Centisome position: 74.44
GC content: 50.36
Gene sequence:
>828_bases GTGAAAGCCGTGAGCAAATTACAGAAAGCACTGGAAAAGGCCAAGGAAGCCCGGGGAGATTCCCTGGAAAGTTTGACTCT TGTTCCGGAGGTTCCCGAAGCGTCTGATAAAGGTTCTGTAGCATGCCTGAAAAGGCAGGAAATTCCCGCTCCTGTCTATT TCCAGACACGCAAACTGCCCGTGGATTTCAATCAGCTCATACAAAACCGGATCATTCCCATTTGTCATGGCAACCCGGCG GCTGACAGGATTAAGATTCTTCGCACTCAGGTTTTGAGCCGGATGACAGAAGAGGGAAAGAACACCCTTTTGATCACGAG TGCCAATCCCGGAGAAGGAAAGACGCTGACAGCCATCAATCTTGCTATCAGCATCGCCCATGAAATGGATCGAACCACCC TGCTCGTGGATACCGATCTTCGAAAACCCTCGATCCACAGCTACTTTGGTTTTGAGGCCAGTCGAGGTCTTTCCGATTAT CTGAAAGAGGGCACACCAATCAGCGATCTGCTGATTTCACCCGGCATTGAAAAGCTGGTTATTCTGCCCGGCGGCCAGCC CATGTCCAACTCAAGTGAGCTTTTGGGATCGCCTCGAATGGAAGCCCTTGTCAAGGAATTGAAGGAACGTTACCCGGATC GATTCATCATTTTCGACAGTTCCTCTCTGTTGACCTGTGCGGACGCACTCGTTTTCTCACGTTTCATCGATGGGATTCTC ATTGTCGTGGAAGCAGAAAGAACAACCCGGAGTGACCTGAAACGGACCTTCGAAATGCTGGGGGATAAACCGGTTATCGG AACCTTGCTCAACAAGTCCAGGGACTAA
Upstream 100 bases:
>100_bases TCAAAAAAGGGAACTCCATTGAATCCGCAAGCTTCGGCAAAGGGGACAACGTGAATGCAGCCTTGCATATAATTCAGATC AGACAGTTAACCAAGAAGAG
Downstream 100 bases:
>100_bases GGGATCATTCTCATGTATGAGTCATTCTACGGTTTAAAGGAAAATCCCTTTCATCTTACGCCGGATCCCGCCTATCTCTT TATGAGTCGGGTCCACGAGG
Product: tyrosine-protein kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MKAVSKLQKALEKAKEARGDSLESLTLVPEVPEASDKGSVACLKRQEIPAPVYFQTRKLPVDFNQLIQNRIIPICHGNPA ADRIKILRTQVLSRMTEEGKNTLLITSANPGEGKTLTAINLAISIAHEMDRTTLLVDTDLRKPSIHSYFGFEASRGLSDY LKEGTPISDLLISPGIEKLVILPGGQPMSNSSELLGSPRMEALVKELKERYPDRFIIFDSSSLLTCADALVFSRFIDGIL IVVEAERTTRSDLKRTFEMLGDKPVIGTLLNKSRD
Sequences:
>Translated_275_residues MKAVSKLQKALEKAKEARGDSLESLTLVPEVPEASDKGSVACLKRQEIPAPVYFQTRKLPVDFNQLIQNRIIPICHGNPA ADRIKILRTQVLSRMTEEGKNTLLITSANPGEGKTLTAINLAISIAHEMDRTTLLVDTDLRKPSIHSYFGFEASRGLSDY LKEGTPISDLLISPGIEKLVILPGGQPMSNSSELLGSPRMEALVKELKERYPDRFIIFDSSSLLTCADALVFSRFIDGIL IVVEAERTTRSDLKRTFEMLGDKPVIGTLLNKSRD >Mature_275_residues MKAVSKLQKALEKAKEARGDSLESLTLVPEVPEASDKGSVACLKRQEIPAPVYFQTRKLPVDFNQLIQNRIIPICHGNPA ADRIKILRTQVLSRMTEEGKNTLLITSANPGEGKTLTAINLAISIAHEMDRTTLLVDTDLRKPSIHSYFGFEASRGLSDY LKEGTPISDLLISPGIEKLVILPGGQPMSNSSELLGSPRMEALVKELKERYPDRFIIFDSSSLLTCADALVFSRFIDGIL IVVEAERTTRSDLKRTFEMLGDKPVIGTLLNKSRD
Specific function: Required For The Extracellular Polysaccharide Colanic Acid Synthesis. The Autophosphorylated Form Is Inactive. Probably Involved In The Export Of Colanic Acid From The Cell To Medium. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Inner membrane (Probable) [C]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CpsD/CapB family [H]
Homologues:
Organism=Escherichia coli, GI87082032, Length=201, Percent_Identity=31.8407960199005, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1787216, Length=166, Percent_Identity=31.9277108433735, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: =2.7.10.2 [H]
Molecular weight: Translated: 30377; Mature: 30377
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAVSKLQKALEKAKEARGDSLESLTLVPEVPEASDKGSVACLKRQEIPAPVYFQTRKLP CCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCEEEECCCCC VDFNQLIQNRIIPICHGNPAADRIKILRTQVLSRMTEEGKNTLLITSANPGEGKTLTAIN CCHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEHH LAISIAHEMDRTTLLVDTDLRKPSIHSYFGFEASRGLSDYLKEGTPISDLLISPGIEKLV HHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCHHCCHHHHHHCCCCHHHHHHCCCCCEEE ILPGGQPMSNSSELLGSPRMEALVKELKERYPDRFIIFDSSSLLTCADALVFSRFIDGIL EECCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCEE IVVEAERTTRSDLKRTFEMLGDKPVIGTLLNKSRD EEEECCCCHHHHHHHHHHHHCCCCHHHHHHCCCCC >Mature Secondary Structure MKAVSKLQKALEKAKEARGDSLESLTLVPEVPEASDKGSVACLKRQEIPAPVYFQTRKLP CCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCEEEECCCCC VDFNQLIQNRIIPICHGNPAADRIKILRTQVLSRMTEEGKNTLLITSANPGEGKTLTAIN CCHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEHH LAISIAHEMDRTTLLVDTDLRKPSIHSYFGFEASRGLSDYLKEGTPISDLLISPGIEKLV HHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCHHCCHHHHHHCCCCHHHHHHCCCCCEEE ILPGGQPMSNSSELLGSPRMEALVKELKERYPDRFIIFDSSSLLTCADALVFSRFIDGIL EECCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCEE IVVEAERTTRSDLKRTFEMLGDKPVIGTLLNKSRD EEEECCCCHHHHHHHHHHHHCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]