| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860158
Identifier: 85860158
GI number: 85860158
Start: 2363811
End: 2365004
Strand: Direct
Name: 85860158
Synonym: SYN_00781
Alternate gene names: NA
Gene position: 2363811-2365004 (Clockwise)
Preceding gene: 85860157
Following gene: 85860159
Centisome position: 74.35
GC content: 51.26
Gene sequence:
>1194_bases ATGAATACAAAACACCTCCCTTCCAGCGGCCTCCGAAGCACGAGCAAGTTGTCCATTTTCATTTTGTCTCTCGTCCTGTC CGGTTTGCTTTTAACCGGGCAAGCCCGAGCCGCGGAAAGGACGATTACTCCCTCGGTCGGGGTCAAGGCGGAGTACAATG ACAACATTGATTTTTCTCATGGAAATGAACGGGATGATTATATCGGCACCATCAGCCCGGGCCTTAAGCTGGATTATAAA ACCGAACGAACGGTCCTTGGCGCCATGGCAAGAATCGATGTCGTCGAATATCTGGATGAAACCGATGAAAATACCGTGAA TCAGACATATGGCTTGAATGCCTCTCACATGCTGCTGGAAAAGCTCGGCATAAGGGCTAACGCCGGCTATATCCGCGATA CAACCACGGACTCGTATCTGGAGGAAACCGGCTTGATTACAAGGAAATCCACGCGCCATAGTTATCGGGCTGGAGCGGGG CTTACCTATAACCTGACCGAAATTTCGGATTTGGGTCTCGATTACGCCTATTCAAAAAGTGACTATGATGAGGAGGACAA AGTAGACTCTACAAAAGATACCGTAAGTATGGCCTATCGTCACTTCTTTCGTGAACGCCGCGATATCGTAACGGTTACGC CTTTCTACTCCCGTTACGACTCCGATACCAGCACCACGGACAACTACGGTCTCTCCGTGGGATTGACCCACCGCCTCCAG GAGACCCTGGTGATGGATGTCGCACTGGGTGTCCGATACTCCGACGCGGAATACCATGATCTGGGCACAACAGATGACAA CTGGGACTGGACGGCCAATATTGCGGCAACGAAGTCCTGGGAAACGGCGTCCGCCACCATCGGTTACGGGCGGGATCTGT ATTACAGCGATCAGGGCGAGCCGATCAACGTGGACCGTTTTTATGCAAGAGCCAACAGAAATCTTACAGAGCGATTCGGC GTGAGCCTGACCGGCAGTCTTTACTTCTCCAAATCCGACGATGAGGTAGGCAATGAAGATACACGTTACTGGGAAGTCAC TCCCAGCCTTTACTACAATATAACACGGGATCACCGGCTGGAAGTGGGATACAGTTATGCCAACGATTACGACAAGACCT TGACGGAGGACGACGAAGCGGAACGGAACAGAATCTGGGTTCTTCTGACATTCAACTTCCCCAAGACCTGGTAA
Upstream 100 bases:
>100_bases GACATTCAAATATGTTTTCTGTACACTTTTTTTCCCCTGAGTTTCCGGACGAATTCGTTTCCATGCTCATGGTGAAAATT TTTATGAAAGGAATGATACA
Downstream 100 bases:
>100_bases GACAGCCACATCGTCGAGAATAAAGAAAAACAAACAAAACCCCTTTATAAAGCAAAGGTGAAGCGCCATGGAAAAGCAGA AGGATTTTAAAGAAATCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MNTKHLPSSGLRSTSKLSIFILSLVLSGLLLTGQARAAERTITPSVGVKAEYNDNIDFSHGNERDDYIGTISPGLKLDYK TERTVLGAMARIDVVEYLDETDENTVNQTYGLNASHMLLEKLGIRANAGYIRDTTTDSYLEETGLITRKSTRHSYRAGAG LTYNLTEISDLGLDYAYSKSDYDEEDKVDSTKDTVSMAYRHFFRERRDIVTVTPFYSRYDSDTSTTDNYGLSVGLTHRLQ ETLVMDVALGVRYSDAEYHDLGTTDDNWDWTANIAATKSWETASATIGYGRDLYYSDQGEPINVDRFYARANRNLTERFG VSLTGSLYFSKSDDEVGNEDTRYWEVTPSLYYNITRDHRLEVGYSYANDYDKTLTEDDEAERNRIWVLLTFNFPKTW
Sequences:
>Translated_397_residues MNTKHLPSSGLRSTSKLSIFILSLVLSGLLLTGQARAAERTITPSVGVKAEYNDNIDFSHGNERDDYIGTISPGLKLDYK TERTVLGAMARIDVVEYLDETDENTVNQTYGLNASHMLLEKLGIRANAGYIRDTTTDSYLEETGLITRKSTRHSYRAGAG LTYNLTEISDLGLDYAYSKSDYDEEDKVDSTKDTVSMAYRHFFRERRDIVTVTPFYSRYDSDTSTTDNYGLSVGLTHRLQ ETLVMDVALGVRYSDAEYHDLGTTDDNWDWTANIAATKSWETASATIGYGRDLYYSDQGEPINVDRFYARANRNLTERFG VSLTGSLYFSKSDDEVGNEDTRYWEVTPSLYYNITRDHRLEVGYSYANDYDKTLTEDDEAERNRIWVLLTFNFPKTW >Mature_397_residues MNTKHLPSSGLRSTSKLSIFILSLVLSGLLLTGQARAAERTITPSVGVKAEYNDNIDFSHGNERDDYIGTISPGLKLDYK TERTVLGAMARIDVVEYLDETDENTVNQTYGLNASHMLLEKLGIRANAGYIRDTTTDSYLEETGLITRKSTRHSYRAGAG LTYNLTEISDLGLDYAYSKSDYDEEDKVDSTKDTVSMAYRHFFRERRDIVTVTPFYSRYDSDTSTTDNYGLSVGLTHRLQ ETLVMDVALGVRYSDAEYHDLGTTDDNWDWTANIAATKSWETASATIGYGRDLYYSDQGEPINVDRFYARANRNLTERFG VSLTGSLYFSKSDDEVGNEDTRYWEVTPSLYYNITRDHRLEVGYSYANDYDKTLTEDDEAERNRIWVLLTFNFPKTW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45181; Mature: 45181
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTKHLPSSGLRSTSKLSIFILSLVLSGLLLTGQARAAERTITPSVGVKAEYNDNIDFSH CCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCHHHCCCCCCCCCEEEECCCCCCCCC GNERDDYIGTISPGLKLDYKTERTVLGAMARIDVVEYLDETDENTVNQTYGLNASHMLLE CCCCCCEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHH KLGIRANAGYIRDTTTDSYLEETGLITRKSTRHSYRAGAGLTYNLTEISDLGLDYAYSKS HHCCCCCCCEEECCCCHHHHHHHCCEEECCCCCHHHCCCCCEEEHHHHHHCCCCEEECCC DYDEEDKVDSTKDTVSMAYRHFFRERRDIVTVTPFYSRYDSDTSTTDNYGLSVGLTHRLQ CCCCHHCCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCCCCCCCCEEEEHHHHHH ETLVMDVALGVRYSDAEYHDLGTTDDNWDWTANIAATKSWETASATIGYGRDLYYSDQGE HHHHHHHHHCCEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCEEEECCCCC PINVDRFYARANRNLTERFGVSLTGSLYFSKSDDEVGNEDTRYWEVTPSLYYNITRDHRL CCCHHHHHHHHCCCHHHHHCCEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEECCCCEE EVGYSYANDYDKTLTEDDEAERNRIWVLLTFNFPKTW EEEEHHHCCCHHHCCCCCCCCCCEEEEEEEECCCCCC >Mature Secondary Structure MNTKHLPSSGLRSTSKLSIFILSLVLSGLLLTGQARAAERTITPSVGVKAEYNDNIDFSH CCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCHHHCCCCCCCCCEEEECCCCCCCCC GNERDDYIGTISPGLKLDYKTERTVLGAMARIDVVEYLDETDENTVNQTYGLNASHMLLE CCCCCCEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHH KLGIRANAGYIRDTTTDSYLEETGLITRKSTRHSYRAGAGLTYNLTEISDLGLDYAYSKS HHCCCCCCCEEECCCCHHHHHHHCCEEECCCCCHHHCCCCCEEEHHHHHHCCCCEEECCC DYDEEDKVDSTKDTVSMAYRHFFRERRDIVTVTPFYSRYDSDTSTTDNYGLSVGLTHRLQ CCCCHHCCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCCCCCCCCEEEEHHHHHH ETLVMDVALGVRYSDAEYHDLGTTDDNWDWTANIAATKSWETASATIGYGRDLYYSDQGE HHHHHHHHHCCEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCEEEECCCCC PINVDRFYARANRNLTERFGVSLTGSLYFSKSDDEVGNEDTRYWEVTPSLYYNITRDHRL CCCHHHHHHHHCCCHHHHHCCEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEECCCCEE EVGYSYANDYDKTLTEDDEAERNRIWVLLTFNFPKTW EEEEHHHCCCHHHCCCCCCCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA