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The map label for this gene is hybA [C]

Identifier: 85860137

GI number: 85860137

Start: 2344703

End: 2345116

Strand: Direct

Name: hybA [C]

Synonym: SYN_00800

Alternate gene names: 85860137

Gene position: 2344703-2345116 (Clockwise)

Preceding gene: 85860135

Following gene: 85860139

Centisome position: 73.75

GC content: 52.9

Gene sequence:

>414_bases
ATGTATTCCAAGAAGGTTATCATCCGATATTCCGCCGGCGTGGTCGATCAGCCGATCATCTATCAACTGGTCAAGAAATA
TGACCTTGTATTCAATATTCTCAAGGCCAGGATCTTTCCCCGTCGGGAGGGCGTCATCGTTCTGGAACTGAGCGGAGAAA
AAGAAAACTTTGATCAGGGGATAAGCTTTCTGCAGGAAAAGGGACTGCGCGTCGAGCCCCTTTCCAAAAGCGTGAGCCGG
AATACGGACAAATGCGTGCACTGCGGCGCCTGTACCGCTTTCTGCCCCACCGATGCCCTGCATATGGACAGGGAAACGAT
GAAGGTCGTTTTTGATCCGGAATTGTGCAACGGCTGCGGGATCTGTGTCACCGCCTGCCCGGCAAGGGCCATGGAGATCA
ACCTGGGATTCTGA

Upstream 100 bases:

>100_bases
CTCGGGGCAATCATCCCCAACCCGGCAATGATTCTCTTGACAGAATCAGGGAATTATTCAATAAAGCAATCCACTTCAAA
TTCAGGAGAGACGCGGGGAC

Downstream 100 bases:

>100_bases
ATGCGGCCCTGAAATCCCGATTCTTATTCCGATTGTTTGCCTGATTCTTTTCCCATCAGCGAATCCAGACTGTCGGAGAA
TTTCATCCCTTTCTGATAGA

Product: ferridoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MYSKKVIIRYSAGVVDQPIIYQLVKKYDLVFNILKARIFPRREGVIVLELSGEKENFDQGISFLQEKGLRVEPLSKSVSR
NTDKCVHCGACTAFCPTDALHMDRETMKVVFDPELCNGCGICVTACPARAMEINLGF

Sequences:

>Translated_137_residues
MYSKKVIIRYSAGVVDQPIIYQLVKKYDLVFNILKARIFPRREGVIVLELSGEKENFDQGISFLQEKGLRVEPLSKSVSR
NTDKCVHCGACTAFCPTDALHMDRETMKVVFDPELCNGCGICVTACPARAMEINLGF
>Mature_137_residues
MYSKKVIIRYSAGVVDQPIIYQLVKKYDLVFNILKARIFPRREGVIVLELSGEKENFDQGISFLQEKGLRVEPLSKSVSR
NTDKCVHCGACTAFCPTDALHMDRETMKVVFDPELCNGCGICVTACPARAMEINLGF

Specific function: Participates In The Periplasmic Electron-Transferring Activity Of Hydrogenase 2 During Its Catalytic Turnover. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR018449 [H]

Pfam domain/function: PF00037 Fer4; PF09383 NIL [H]

EC number: NA

Molecular weight: Translated: 15352; Mature: 15352

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
5.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSKKVIIRYSAGVVDQPIIYQLVKKYDLVFNILKARIFPRREGVIVLELSGEKENFDQG
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHH
ISFLQEKGLRVEPLSKSVSRNTDKCVHCGACTAFCPTDALHMDRETMKVVFDPELCNGCG
HHHHHHCCCEECCCCHHHCCCCCCEEECCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCC
ICVTACPARAMEINLGF
EEEECCCCEEEEEEECC
>Mature Secondary Structure
MYSKKVIIRYSAGVVDQPIIYQLVKKYDLVFNILKARIFPRREGVIVLELSGEKENFDQG
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHH
ISFLQEKGLRVEPLSKSVSRNTDKCVHCGACTAFCPTDALHMDRETMKVVFDPELCNGCG
HHHHHHCCCEECCCCHHHCCCCCCEEECCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCC
ICVTACPARAMEINLGF
EEEECCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]