Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is yfiQ [C]

Identifier: 85860036

GI number: 85860036

Start: 2249139

End: 2251244

Strand: Direct

Name: yfiQ [C]

Synonym: SYN_00049

Alternate gene names: 85860036

Gene position: 2249139-2251244 (Clockwise)

Preceding gene: 85860035

Following gene: 85860037

Centisome position: 70.74

GC content: 53.61

Gene sequence:

>2106_bases
ATGCATTCATTTTTCAATCCGCAGAGCATTGCCGTCATCGGAGCAACCCCCAAAACCTTTAAAGGGGGTTATGCTATTCT
CAAAAACCTGAAGACGACTTTCAAGGGACGGATTTACCCCATCAATCCCCAGTATGCTGAAATAGAAGGGCTTCCCTGCT
TCCCGTCGATCAAGGACATTCCTGAAGCCGTTGACCTGGCGATCATTTTCATCGCAGCCGTTCATGTTCCGGCCGCTCTT
GAGCAATGCGCAATCAAAGGCGTTTCGGGAATCATGATCGAATCAGGCGGATTTGCCGAGGCGGATGAAAAGGGAAAAAG
TCTTCAAGACGCCATCAGGAGTTTTGTTGAGCGAACAGGGATACGCGTCTGGGGACCAAACTGCATGGGCCTGGTTGATG
GGATCCGGGGTCATATCTTCTCTTTCACCGATCCGAAGGTCCTGCCTTTCTGCCTGCATCCCGGCCCGGTGTCTCTCATT
GTTCAAAGCGGCATGCTCTCCGCCGGTTTCGTCATCGATATTTTAAGTCATGGCATAACCGGTTTCAGTAAGGTCTGTTC
CATCGGCAATAAAGCGGACATTGATGAAAGTGATGTCCTCTCTTTTCTTCTTGAAGATCCGGATACCCGATGTGTCGGAC
TTTATCTCGAATCTTTCGTCAACGGCAGACGATTCATGGACCTCTGCCGGAAGAGCGATAAGCCCGTGATCGTTCTGAAG
GGCGGCAGAAGCCGCAAGGGAGCGGAGGCAGCCGTCAGCCATACCGCCAGTCTGGCGGGAAATTATCGGGTCGCCGCCGG
CGCGCTCGCCCAGGCCGGTGCTTATGAAGCAAGAGATTTCCATCAGCTTGTTGATTTCTGCCGCACACTCGCACTGTATC
CTCCAAAGCGGAACAAATCCAGGGGACGTATCGCGGTCATCACCTTCAGTGGCGCCGCGGGGATTGTATCCACTGATTTC
ATGAATGAGCTGGATCTCGACGTGGCAGAACTTTCAGAGGCTACGAAGATTCGCCTGGGGCGCATTTTCCCCGAATGGAT
GCCTGTCGCCAATCCGGTGGACATCTGGCCGGCCATAGAACAGCACAGCGGTACCGGCCTGGATATCTACAGTCTTGCCA
TGGAAGCGGCCCTTGATGATCCGGGAGTGGATGCCGTGCTTGTACATGCCTTTTCCGGCTACACAAGAATTCGGCTGGAT
TTTGATAAAATTTCCCGACAGAGCCGCTCTTCCGGGAAGCCCGTTCTGCTCTGGCTGCCCGGCAACCGGGATGACGCCTT
CCAGGTTCAGATAAAGGCCCGCGATTGCGGCGTCCTTGTATTTCATGAACTTTACCGGGCCGTATCGTGTCTGTCCATCC
TGTTCCAAAGGACCGGGACCTGCTGGCTGCCTGAAGGGAATCAGCCTGTGCCGACCGATGAGCTTCAGAATATCCCCGAT
GACATTTCCGATCTTCTCAATAATGCGGGTGGATCTCTGGATGAAAGGCTGTCGAAAAATATCCTGAAATCCTTTGGAAT
TCCCACCGTTGAAGAAACATGGATAAAGGACCCCCGGCTGTGCGAGTCAAAAGCGATTTCAATGGGGTTTCCGCTCGTCA
TGAAAGGATTGCAGACCGGAGTTGTCCATAAAACGGAACACGGCCTGGTCGAGTTGAATATTGTCGGACCGGAAGAAGCC
AGACAGAGCTTTGAAAGGCTTCTGCAGAAAATGAACGGGCGGGGCTCAGTTTTAATGCAGAAGCAATTGCAGGGCGACGT
GGAATTGATCATGGGCGCCATCCGAGACCCTCAGTTCGGCCCCTGCGTCATGATCGGCATCGGTGGAAGGATGGCCGATC
TCATTGAAGATTCGGTCTTTACCGTCGCCCCGCTCAGTGTAAAAGAAGCCCTCGACGCCATCGGACGATTGCGAACGCAG
ACTCTTCTGGATGGATTCCGCGGTTCTCAACCTGCTGACCGTCACGTTCTTGCCTCCCTGATGGTCACCCTGGGCCACCT
TATGGCGCGCTACCCCCGTATCCAGGAAATTGATATCAATCCCATCCTTGTTTCGGGCAGCCAGGCCGTTGCCGTGGATG
CGACAGTCGTTTTAAGCAATCCTTGA

Upstream 100 bases:

>100_bases
TAAATTTATACAAGTTCCATGGATCACAGAGATTCAGAAAATATTGCCAGATGTTAATACCATGAACTAACCGACACCAT
CTCATTCATTACTTGATCTC

Downstream 100 bases:

>100_bases
AATCGAATGTAAAATGGAGGGAAAAATCATGAAGAATCCTGATCCAAACAAGAAAATTCCCAGCAACCCTGCTCTTGAAG
AGGAAATCCGGCGACGTGCG

Product: acetyl-CoA synthetase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 701; Mature: 701

Protein sequence:

>701_residues
MHSFFNPQSIAVIGATPKTFKGGYAILKNLKTTFKGRIYPINPQYAEIEGLPCFPSIKDIPEAVDLAIIFIAAVHVPAAL
EQCAIKGVSGIMIESGGFAEADEKGKSLQDAIRSFVERTGIRVWGPNCMGLVDGIRGHIFSFTDPKVLPFCLHPGPVSLI
VQSGMLSAGFVIDILSHGITGFSKVCSIGNKADIDESDVLSFLLEDPDTRCVGLYLESFVNGRRFMDLCRKSDKPVIVLK
GGRSRKGAEAAVSHTASLAGNYRVAAGALAQAGAYEARDFHQLVDFCRTLALYPPKRNKSRGRIAVITFSGAAGIVSTDF
MNELDLDVAELSEATKIRLGRIFPEWMPVANPVDIWPAIEQHSGTGLDIYSLAMEAALDDPGVDAVLVHAFSGYTRIRLD
FDKISRQSRSSGKPVLLWLPGNRDDAFQVQIKARDCGVLVFHELYRAVSCLSILFQRTGTCWLPEGNQPVPTDELQNIPD
DISDLLNNAGGSLDERLSKNILKSFGIPTVEETWIKDPRLCESKAISMGFPLVMKGLQTGVVHKTEHGLVELNIVGPEEA
RQSFERLLQKMNGRGSVLMQKQLQGDVELIMGAIRDPQFGPCVMIGIGGRMADLIEDSVFTVAPLSVKEALDAIGRLRTQ
TLLDGFRGSQPADRHVLASLMVTLGHLMARYPRIQEIDINPILVSGSQAVAVDATVVLSNP

Sequences:

>Translated_701_residues
MHSFFNPQSIAVIGATPKTFKGGYAILKNLKTTFKGRIYPINPQYAEIEGLPCFPSIKDIPEAVDLAIIFIAAVHVPAAL
EQCAIKGVSGIMIESGGFAEADEKGKSLQDAIRSFVERTGIRVWGPNCMGLVDGIRGHIFSFTDPKVLPFCLHPGPVSLI
VQSGMLSAGFVIDILSHGITGFSKVCSIGNKADIDESDVLSFLLEDPDTRCVGLYLESFVNGRRFMDLCRKSDKPVIVLK
GGRSRKGAEAAVSHTASLAGNYRVAAGALAQAGAYEARDFHQLVDFCRTLALYPPKRNKSRGRIAVITFSGAAGIVSTDF
MNELDLDVAELSEATKIRLGRIFPEWMPVANPVDIWPAIEQHSGTGLDIYSLAMEAALDDPGVDAVLVHAFSGYTRIRLD
FDKISRQSRSSGKPVLLWLPGNRDDAFQVQIKARDCGVLVFHELYRAVSCLSILFQRTGTCWLPEGNQPVPTDELQNIPD
DISDLLNNAGGSLDERLSKNILKSFGIPTVEETWIKDPRLCESKAISMGFPLVMKGLQTGVVHKTEHGLVELNIVGPEEA
RQSFERLLQKMNGRGSVLMQKQLQGDVELIMGAIRDPQFGPCVMIGIGGRMADLIEDSVFTVAPLSVKEALDAIGRLRTQ
TLLDGFRGSQPADRHVLASLMVTLGHLMARYPRIQEIDINPILVSGSQAVAVDATVVLSNP
>Mature_701_residues
MHSFFNPQSIAVIGATPKTFKGGYAILKNLKTTFKGRIYPINPQYAEIEGLPCFPSIKDIPEAVDLAIIFIAAVHVPAAL
EQCAIKGVSGIMIESGGFAEADEKGKSLQDAIRSFVERTGIRVWGPNCMGLVDGIRGHIFSFTDPKVLPFCLHPGPVSLI
VQSGMLSAGFVIDILSHGITGFSKVCSIGNKADIDESDVLSFLLEDPDTRCVGLYLESFVNGRRFMDLCRKSDKPVIVLK
GGRSRKGAEAAVSHTASLAGNYRVAAGALAQAGAYEARDFHQLVDFCRTLALYPPKRNKSRGRIAVITFSGAAGIVSTDF
MNELDLDVAELSEATKIRLGRIFPEWMPVANPVDIWPAIEQHSGTGLDIYSLAMEAALDDPGVDAVLVHAFSGYTRIRLD
FDKISRQSRSSGKPVLLWLPGNRDDAFQVQIKARDCGVLVFHELYRAVSCLSILFQRTGTCWLPEGNQPVPTDELQNIPD
DISDLLNNAGGSLDERLSKNILKSFGIPTVEETWIKDPRLCESKAISMGFPLVMKGLQTGVVHKTEHGLVELNIVGPEEA
RQSFERLLQKMNGRGSVLMQKQLQGDVELIMGAIRDPQFGPCVMIGIGGRMADLIEDSVFTVAPLSVKEALDAIGRLRTQ
TLLDGFRGSQPADRHVLASLMVTLGHLMARYPRIQEIDINPILVSGSQAVAVDATVVLSNP

Specific function: Unknown

COG id: COG1042

COG function: function code C; Acyl-CoA synthetase (NDP forming)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfiQ [H]

Homologues:

Organism=Escherichia coli, GI1788938, Length=749, Percent_Identity=26.5687583444593, Blast_Score=188, Evalue=1e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014089
- InterPro:   IPR013650
- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR005809
- InterPro:   IPR016102 [H]

Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]

EC number: NA

Molecular weight: Translated: 76194; Mature: 76194

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSFFNPQSIAVIGATPKTFKGGYAILKNLKTTFKGRIYPINPQYAEIEGLPCFPSIKDI
CCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCEEEECCCCCEEECCCCCCCCHHHH
PEAVDLAIIFIAAVHVPAALEQCAIKGVSGIMIESGGFAEADEKGKSLQDAIRSFVERTG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHCCCHHHHHHHHHHHHCC
IRVWGPNCMGLVDGIRGHIFSFTDPKVLPFCLHPGPVSLIVQSGMLSAGFVIDILSHGIT
CEEECCCHHHHHHHHHCCEEECCCCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHHCCCC
GFSKVCSIGNKADIDESDVLSFLLEDPDTRCVGLYLESFVNGRRFMDLCRKSDKPVIVLK
CHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEE
GGRSRKGAEAAVSHTASLAGNYRVAAGALAQAGAYEARDFHQLVDFCRTLALYPPKRNKS
CCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
RGRIAVITFSGAAGIVSTDFMNELDLDVAELSEATKIRLGRIFPEWMPVANPVDIWPAIE
CCEEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHH
QHSGTGLDIYSLAMEAALDDPGVDAVLVHAFSGYTRIRLDFDKISRQSRSSGKPVLLWLP
CCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEHHHHHHHHCCCCCEEEEEEC
GNRDDAFQVQIKARDCGVLVFHELYRAVSCLSILFQRTGTCWLPEGNQPVPTDELQNIPD
CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCCH
DISDLLNNAGGSLDERLSKNILKSFGIPTVEETWIKDPRLCESKAISMGFPLVMKGLQTG
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHCCCHHHHHHHHHC
VVHKTEHGLVELNIVGPEEARQSFERLLQKMNGRGSVLMQKQLQGDVELIMGAIRDPQFG
CEEECCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCHHHHHHHHCCCCCC
PCVMIGIGGRMADLIEDSVFTVAPLSVKEALDAIGRLRTQTLLDGFRGSQPADRHVLASL
CEEEEECCCHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
MVTLGHLMARYPRIQEIDINPILVSGSQAVAVDATVVLSNP
HHHHHHHHHHCCCCEEECCCEEEEECCCEEEEEEEEEEECC
>Mature Secondary Structure
MHSFFNPQSIAVIGATPKTFKGGYAILKNLKTTFKGRIYPINPQYAEIEGLPCFPSIKDI
CCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCEEEECCCCCEEECCCCCCCCHHHH
PEAVDLAIIFIAAVHVPAALEQCAIKGVSGIMIESGGFAEADEKGKSLQDAIRSFVERTG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHCCCHHHHHHHHHHHHCC
IRVWGPNCMGLVDGIRGHIFSFTDPKVLPFCLHPGPVSLIVQSGMLSAGFVIDILSHGIT
CEEECCCHHHHHHHHHCCEEECCCCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHHCCCC
GFSKVCSIGNKADIDESDVLSFLLEDPDTRCVGLYLESFVNGRRFMDLCRKSDKPVIVLK
CHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEE
GGRSRKGAEAAVSHTASLAGNYRVAAGALAQAGAYEARDFHQLVDFCRTLALYPPKRNKS
CCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
RGRIAVITFSGAAGIVSTDFMNELDLDVAELSEATKIRLGRIFPEWMPVANPVDIWPAIE
CCEEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHH
QHSGTGLDIYSLAMEAALDDPGVDAVLVHAFSGYTRIRLDFDKISRQSRSSGKPVLLWLP
CCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEHHHHHHHHCCCCCEEEEEEC
GNRDDAFQVQIKARDCGVLVFHELYRAVSCLSILFQRTGTCWLPEGNQPVPTDELQNIPD
CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCCH
DISDLLNNAGGSLDERLSKNILKSFGIPTVEETWIKDPRLCESKAISMGFPLVMKGLQTG
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHCCCHHHHHHHHHC
VVHKTEHGLVELNIVGPEEARQSFERLLQKMNGRGSVLMQKQLQGDVELIMGAIRDPQFG
CEEECCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCHHHHHHHHCCCCCC
PCVMIGIGGRMADLIEDSVFTVAPLSVKEALDAIGRLRTQTLLDGFRGSQPADRHVLASL
CEEEEECCCHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
MVTLGHLMARYPRIQEIDINPILVSGSQAVAVDATVVLSNP
HHHHHHHHHHCCCCEEECCCEEEEECCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]