Click here to switch to the map view.

The map label for this gene is 85860012

Identifier: 85860012

GI number: 85860012

Start: 2229611

End: 2232097

Strand: Direct

Name: 85860012

Synonym: SYN_00746

Alternate gene names: NA

Gene position: 2229611-2232097 (Clockwise)

Preceding gene: 85860011

Following gene: 85860013

Centisome position: 70.13

GC content: 56.82

Gene sequence:

>2487_bases
ATGCGAACCGTAACCAGGTCATTCCTGAGATATCTTGTCAGGCGGCGCAGCCTGAGTCTGCTGCAGTTGATGGGTATCGC
CTTCGGTGTGGCGGCTTCCCTGGGTATGGCGTTTTCCGCGATGTCGGCCCTGGCGAGTTTCACTCACGCCATTGAATATC
TTCAGGGAAAATCGACCCATTCCCTCGAACGGAACGCCGGCCCCATGGACGAAGCCATTCTCCAGGGGCTGATCAGTGAT
CCGTCCGTAGAGTCGTTTTCGCCAGTCATCGATCGCCGTCTTCGCGTTGCGGATGGCAGCCAGATTCGGATCCTCGGAAT
CGATCCTTTTCTCGATACGGCAATTCGGCCTGAGTTGGCCCGGACTTCTTTTTCCGACGATCGGAGAAAGGGCTCAGAAG
AAAGCCTTTCCTTTGTTCTCGAAGAAAAAGCCGTCCTGATGGAAGCCGGAATGGCTCAGCATTTGAACCTTGCGGCTGGG
AGTAAAATTTGGAGTTCCCATGGAGAACTGGAGGTCATCGGCACCTTTCCCAACCCATCGGGCGAACCCCTGCTGCTCAT
GGATATCGCCCATGCGCAGAAACTCTTCAACATGCCCGGCCTGATCGACCGAGTCGACCTTGTCCTGGCGGAAGAGCAGG
AATTTCGAAACCGATGGAAAACCGGTTTTCAGATCAAGTCCAACCGGCAGCGTCAGGAAACCTTCACTGCCATGCTGGGC
GCGTTCCGGCTGAATCTTGAAGCCCTGTCGCTCATGGCGCTCTTTGTCGCCGTTTTCCTGATTTACAACACCACCATGTT
CGCCGTTGTCAGCCGCAGGCGGGATGCAGGCATTCTTCGAAGTCTGGGGGCGAGCCGCGGCGAGATCATCCTGGCGTTCA
TGACGGAGATCCTCATTTTCGGAGTCATCGGAGGGGCCGTCGGCAGTGTGATGGGATACATTCTGAGCCGCCTTTTGACG
GAGGTCATCGGGGGAACGATCAGCAATCTCTATTTCTTTCTGCGCCCGGTTCCTCTGGCATGGTCGTTCTGGATGCCGGC
CGCCGGTGTGCTCATCGGCTGCGGGGCGAGTGTCCTGGGCAGCATTTTCCCGCTGATCGAACTGGCGCGCCTGGATCCCG
TTAAAGCGCTTTACGGCCGATCCGTAAGCCGCAGAGGAGACCTCGCCGCAAAAAAAGTCGCGGCATCCGGCATGTTGATC
CTGCTTCTCAGCGCCGCCGTTTTTCTCCTGCCTTCGAACAGCATCTACACCGCTTATGGCGCCCTCTTCGGGGTCCTTTT
CGGACTTAGCCTGCTTACCGGTTACATCGTTATTGTCTGTTCGCCCTTTCTCACGGGCTTCCTGACCGGCCTGGGCGGCA
TTCCCGGAAAAATCGCGGCCGGCAACATCCGCCGGAACCTGGGACGCACCGCTGTGGCTGTCGCGGCTTTCATGGTGGCT
CTTTCCATGTCTGTCGGCCTTTCTCTGATGATCGGAAGTTTTCGCGAATCGCTCCTCTGGTGGATGGACAGGCAGTTTCA
GGGGGATCTCTATATTTCCAACGCGTCGGAAAAGGAAGTTCCGGAAAGGTTTTATCTTGAGCTGAAGGCCATGCCAGGCA
TCGCCGTAGACGCGTACCGCAAGACCCAAATGACTTATCGCAACAGGCCCATGTTCGTCTCCTCAGTCAACGCCCCCGTG
CTCCAACGATACGCGCGCTTCGCCTGGCTGTCCGGTGATGATGAGCATTGGGAGGCCGTCAAGAAAGGAGATGTGATCAT
TTCGGAGAGTTTCGCCCGTAGTTTCGGCGTCGGGGCCGGAGACATCATCACCCTGGAGGGCATGCAGGGGCCGGCGAGGC
TGCGCGTTGAAGCCGTATTCTATGATTACTCTACAGAACATGGCCTCGTGATGATGGATCGCGGCACCTACCTTCGGCTC
TTCGCCGATCGGACCATCAACAGTGTGGCGGTTTTCCTTGACCCGGGGAATCCCCGGCGCCCGCATATCCTTGATCAGAT
CAGGCAGAAGGCCCGGCAGCATGGTCTTCCCGTCTCCAATCGGGAGCAGTTTTACGGAAACATCCTTGCAATCTTTGACA
GCACCTTCGCGATCACCCGTTCCATGAGGTTCCTGGCCATCATCATCGCCTTTTTCGGCATTGCCGGCGCGCTGATGACC
CTTTTTCTCGAACGGAAGAGTGAGTACGGAATCCTCAGGGCGCTTGGATTGTCGACAGGGCAGGTCGCGCTCATGACCCT
GCTCGAAGCCATCGGGATGGGGATCATGAGTTTTCTGCTCAGTGCCGGTAGTGGCACCCTCTTCGCCTTTATTCTTATCC
GGGTGATCAATCTTCGCAGTTTCAACTGGACGATTTTTTTCCACCCACACCTTTCCCCTTATCTTCTCACCGCCCTGACA
GCCCTTCTGGCCAGTTTCGGAGCGGCGCTATATCCGATATGGGTGGTTCTGCGGACTTATCCGCAGATGCAGATACGGGA
TGATTGA

Upstream 100 bases:

>100_bases
CTGAGGACGATGGTGAAGCGCGGGAAATCCGGAACGAGAAAATCGAGTCCGGCTTCCCGGCAGAGAAGCCACGTCATCAT
CGATAAAAGGGACAGCGCAG

Downstream 100 bases:

>100_bases
ATTGCAGCAGAAAATACAGGAAAAGAAAGGACCGCGGAAAGCATGATCAACCGATATCATTACAGAAACACATCCTTCCT
TATCCTGATCATCATGATAC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 828; Mature: 828

Protein sequence:

>828_residues
MRTVTRSFLRYLVRRRSLSLLQLMGIAFGVAASLGMAFSAMSALASFTHAIEYLQGKSTHSLERNAGPMDEAILQGLISD
PSVESFSPVIDRRLRVADGSQIRILGIDPFLDTAIRPELARTSFSDDRRKGSEESLSFVLEEKAVLMEAGMAQHLNLAAG
SKIWSSHGELEVIGTFPNPSGEPLLLMDIAHAQKLFNMPGLIDRVDLVLAEEQEFRNRWKTGFQIKSNRQRQETFTAMLG
AFRLNLEALSLMALFVAVFLIYNTTMFAVVSRRRDAGILRSLGASRGEIILAFMTEILIFGVIGGAVGSVMGYILSRLLT
EVIGGTISNLYFFLRPVPLAWSFWMPAAGVLIGCGASVLGSIFPLIELARLDPVKALYGRSVSRRGDLAAKKVAASGMLI
LLLSAAVFLLPSNSIYTAYGALFGVLFGLSLLTGYIVIVCSPFLTGFLTGLGGIPGKIAAGNIRRNLGRTAVAVAAFMVA
LSMSVGLSLMIGSFRESLLWWMDRQFQGDLYISNASEKEVPERFYLELKAMPGIAVDAYRKTQMTYRNRPMFVSSVNAPV
LQRYARFAWLSGDDEHWEAVKKGDVIISESFARSFGVGAGDIITLEGMQGPARLRVEAVFYDYSTEHGLVMMDRGTYLRL
FADRTINSVAVFLDPGNPRRPHILDQIRQKARQHGLPVSNREQFYGNILAIFDSTFAITRSMRFLAIIIAFFGIAGALMT
LFLERKSEYGILRALGLSTGQVALMTLLEAIGMGIMSFLLSAGSGTLFAFILIRVINLRSFNWTIFFHPHLSPYLLTALT
ALLASFGAALYPIWVVLRTYPQMQIRDD

Sequences:

>Translated_828_residues
MRTVTRSFLRYLVRRRSLSLLQLMGIAFGVAASLGMAFSAMSALASFTHAIEYLQGKSTHSLERNAGPMDEAILQGLISD
PSVESFSPVIDRRLRVADGSQIRILGIDPFLDTAIRPELARTSFSDDRRKGSEESLSFVLEEKAVLMEAGMAQHLNLAAG
SKIWSSHGELEVIGTFPNPSGEPLLLMDIAHAQKLFNMPGLIDRVDLVLAEEQEFRNRWKTGFQIKSNRQRQETFTAMLG
AFRLNLEALSLMALFVAVFLIYNTTMFAVVSRRRDAGILRSLGASRGEIILAFMTEILIFGVIGGAVGSVMGYILSRLLT
EVIGGTISNLYFFLRPVPLAWSFWMPAAGVLIGCGASVLGSIFPLIELARLDPVKALYGRSVSRRGDLAAKKVAASGMLI
LLLSAAVFLLPSNSIYTAYGALFGVLFGLSLLTGYIVIVCSPFLTGFLTGLGGIPGKIAAGNIRRNLGRTAVAVAAFMVA
LSMSVGLSLMIGSFRESLLWWMDRQFQGDLYISNASEKEVPERFYLELKAMPGIAVDAYRKTQMTYRNRPMFVSSVNAPV
LQRYARFAWLSGDDEHWEAVKKGDVIISESFARSFGVGAGDIITLEGMQGPARLRVEAVFYDYSTEHGLVMMDRGTYLRL
FADRTINSVAVFLDPGNPRRPHILDQIRQKARQHGLPVSNREQFYGNILAIFDSTFAITRSMRFLAIIIAFFGIAGALMT
LFLERKSEYGILRALGLSTGQVALMTLLEAIGMGIMSFLLSAGSGTLFAFILIRVINLRSFNWTIFFHPHLSPYLLTALT
ALLASFGAALYPIWVVLRTYPQMQIRDD
>Mature_828_residues
MRTVTRSFLRYLVRRRSLSLLQLMGIAFGVAASLGMAFSAMSALASFTHAIEYLQGKSTHSLERNAGPMDEAILQGLISD
PSVESFSPVIDRRLRVADGSQIRILGIDPFLDTAIRPELARTSFSDDRRKGSEESLSFVLEEKAVLMEAGMAQHLNLAAG
SKIWSSHGELEVIGTFPNPSGEPLLLMDIAHAQKLFNMPGLIDRVDLVLAEEQEFRNRWKTGFQIKSNRQRQETFTAMLG
AFRLNLEALSLMALFVAVFLIYNTTMFAVVSRRRDAGILRSLGASRGEIILAFMTEILIFGVIGGAVGSVMGYILSRLLT
EVIGGTISNLYFFLRPVPLAWSFWMPAAGVLIGCGASVLGSIFPLIELARLDPVKALYGRSVSRRGDLAAKKVAASGMLI
LLLSAAVFLLPSNSIYTAYGALFGVLFGLSLLTGYIVIVCSPFLTGFLTGLGGIPGKIAAGNIRRNLGRTAVAVAAFMVA
LSMSVGLSLMIGSFRESLLWWMDRQFQGDLYISNASEKEVPERFYLELKAMPGIAVDAYRKTQMTYRNRPMFVSSVNAPV
LQRYARFAWLSGDDEHWEAVKKGDVIISESFARSFGVGAGDIITLEGMQGPARLRVEAVFYDYSTEHGLVMMDRGTYLRL
FADRTINSVAVFLDPGNPRRPHILDQIRQKARQHGLPVSNREQFYGNILAIFDSTFAITRSMRFLAIIIAFFGIAGALMT
LFLERKSEYGILRALGLSTGQVALMTLLEAIGMGIMSFLLSAGSGTLFAFILIRVINLRSFNWTIFFHPHLSPYLLTALT
ALLASFGAALYPIWVVLRTYPQMQIRDD

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 91223; Mature: 91223

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTVTRSFLRYLVRRRSLSLLQLMGIAFGVAASLGMAFSAMSALASFTHAIEYLQGKSTH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SLERNAGPMDEAILQGLISDPSVESFSPVIDRRLRVADGSQIRILGIDPFLDTAIRPELA
CCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHEECCCCEEEEEECCHHHHHHCCCHHH
RTSFSDDRRKGSEESLSFVLEEKAVLMEAGMAQHLNLAAGSKIWSSHGELEVIGTFPNPS
HCCCCHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHCCCCCEEEEEECCCCC
GEPLLLMDIAHAQKLFNMPGLIDRVDLVLAEEQEFRNRWKTGFQIKSNRQRQETFTAMLG
CCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHH
AFRLNLEALSLMALFVAVFLIYNTTMFAVVSRRRDAGILRSLGASRGEIILAFMTEILIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
GVIGGAVGSVMGYILSRLLTEVIGGTISNLYFFLRPVPLAWSFWMPAAGVLIGCGASVLG
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHH
SIFPLIELARLDPVKALYGRSVSRRGDLAAKKVAASGMLILLLSAAVFLLPSNSIYTAYG
HHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHH
ALFGVLFGLSLLTGYIVIVCSPFLTGFLTGLGGIPGKIAAGNIRRNLGRTAVAVAAFMVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LSMSVGLSLMIGSFRESLLWWMDRQFQGDLYISNASEKEVPERFYLELKAMPGIAVDAYR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHCCHHHHHEEECCCCCCHHHHH
KTQMTYRNRPMFVSSVNAPVLQRYARFAWLSGDDEHWEAVKKGDVIISESFARSFGVGAG
HHHHHHCCCCCEEECCCHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEHHHHHHHCCCCC
DIITLEGMQGPARLRVEAVFYDYSTEHGLVMMDRGTYLRLFADRTINSVAVFLDPGNPRR
CEEEEECCCCCCCEEEEEEEEECCCCCCEEEEECCCEEEEEECCCCCEEEEEECCCCCCC
PHILDQIRQKARQHGLPVSNREQFYGNILAIFDSTFAITRSMRFLAIIIAFFGIAGALMT
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFLERKSEYGILRALGLSTGQVALMTLLEAIGMGIMSFLLSAGSGTLFAFILIRVINLRS
HHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
FNWTIFFHPHLSPYLLTALTALLASFGAALYPIWVVLRTYPQMQIRDD
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC
>Mature Secondary Structure
MRTVTRSFLRYLVRRRSLSLLQLMGIAFGVAASLGMAFSAMSALASFTHAIEYLQGKSTH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SLERNAGPMDEAILQGLISDPSVESFSPVIDRRLRVADGSQIRILGIDPFLDTAIRPELA
CCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHEECCCCEEEEEECCHHHHHHCCCHHH
RTSFSDDRRKGSEESLSFVLEEKAVLMEAGMAQHLNLAAGSKIWSSHGELEVIGTFPNPS
HCCCCHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHCCCCCEEEEEECCCCC
GEPLLLMDIAHAQKLFNMPGLIDRVDLVLAEEQEFRNRWKTGFQIKSNRQRQETFTAMLG
CCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHH
AFRLNLEALSLMALFVAVFLIYNTTMFAVVSRRRDAGILRSLGASRGEIILAFMTEILIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
GVIGGAVGSVMGYILSRLLTEVIGGTISNLYFFLRPVPLAWSFWMPAAGVLIGCGASVLG
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHH
SIFPLIELARLDPVKALYGRSVSRRGDLAAKKVAASGMLILLLSAAVFLLPSNSIYTAYG
HHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHH
ALFGVLFGLSLLTGYIVIVCSPFLTGFLTGLGGIPGKIAAGNIRRNLGRTAVAVAAFMVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LSMSVGLSLMIGSFRESLLWWMDRQFQGDLYISNASEKEVPERFYLELKAMPGIAVDAYR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHCCHHHHHEEECCCCCCHHHHH
KTQMTYRNRPMFVSSVNAPVLQRYARFAWLSGDDEHWEAVKKGDVIISESFARSFGVGAG
HHHHHHCCCCCEEECCCHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEHHHHHHHCCCCC
DIITLEGMQGPARLRVEAVFYDYSTEHGLVMMDRGTYLRLFADRTINSVAVFLDPGNPRR
CEEEEECCCCCCCEEEEEEEEECCCCCCEEEEECCCEEEEEECCCCCEEEEEECCCCCCC
PHILDQIRQKARQHGLPVSNREQFYGNILAIFDSTFAITRSMRFLAIIIAFFGIAGALMT
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFLERKSEYGILRALGLSTGQVALMTLLEAIGMGIMSFLLSAGSGTLFAFILIRVINLRS
HHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
FNWTIFFHPHLSPYLLTALTALLASFGAALYPIWVVLRTYPQMQIRDD
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]