| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is porC [H]
Identifier: 85859954
GI number: 85859954
Start: 2181929
End: 2182456
Strand: Direct
Name: porC [H]
Synonym: SYN_00693
Alternate gene names: 85859954
Gene position: 2181929-2182456 (Clockwise)
Preceding gene: 85859953
Following gene: 85859955
Centisome position: 68.63
GC content: 54.73
Gene sequence:
>528_bases ATGCTTGAGATCCGCATCCACTCCCGGGGCGGCCAGGGTGGGGTGACAGGGGCAAGGCTTCTTGCCCTGGCAGCGATCCA TGACGGGAAGTACGCAACGGCCAGCGTCTTCTACGGGCCGCAACGCCGGGGGGCGCCCGTCATGTCCTTCGTCCGGATAG ATGATCGCCCGATCAGGATCTACAGTCGCATCAAGGAACCCGATATGGTCGTAATCCTGGATGCGAGCGTGATGGATATG GTCAATGTGCTGCAGGGTTTGAAACAGGGCGGCAGGATATTCATCAACAGCGTTGAAGCAAAAGATTTCCCCGGTTTTTC CACTTGTCACGCAGACCTGACCGGAATCGCGCAGAAGGAAAATATCATCGTTGCCGGCTATACGATTTTGAACACACCCA TGCTCGGGTGTCTCGCAAAGATGGGGATTATCTCGCTGGATTCGGCAAGAAAGTCGATTCTGGAGATGTTTCCCGATGAA TGCAACGTCAGGGCTGCAGAAGCAGGATATCGAGAGATGAAACTATGA
Upstream 100 bases:
>100_bases ATCGCCGGTCTCGGGGGACAGGAAGTTACGTATGAAGATATCGCCGATTTCATCCGTCAGCGTCGTATCGGTGAGGAATG CTGGTTCGGGGTGAACGACC
Downstream 100 bases:
>100_bases GTCAGGGTCGTCAGCGCCTCGCCATGAGCAGGCCAAAACAGGGAGCTGCAGGCAGGACCGGATTCTGGCGGATTTCAAAA CCGGTCGTGGATAAGGACAA
Product: pyruvate synthase subunit gamma
Products: NA
Alternate protein names: Pyruvate oxidoreductase gamma chain; POR; Pyruvic-ferredoxin oxidoreductase subunit gamma [H]
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MLEIRIHSRGGQGGVTGARLLALAAIHDGKYATASVFYGPQRRGAPVMSFVRIDDRPIRIYSRIKEPDMVVILDASVMDM VNVLQGLKQGGRIFINSVEAKDFPGFSTCHADLTGIAQKENIIVAGYTILNTPMLGCLAKMGIISLDSARKSILEMFPDE CNVRAAEAGYREMKL
Sequences:
>Translated_175_residues MLEIRIHSRGGQGGVTGARLLALAAIHDGKYATASVFYGPQRRGAPVMSFVRIDDRPIRIYSRIKEPDMVVILDASVMDM VNVLQGLKQGGRIFINSVEAKDFPGFSTCHADLTGIAQKENIIVAGYTILNTPMLGCLAKMGIISLDSARKSILEMFPDE CNVRAAEAGYREMKL >Mature_175_residues MLEIRIHSRGGQGGVTGARLLALAAIHDGKYATASVFYGPQRRGAPVMSFVRIDDRPIRIYSRIKEPDMVVILDASVMDM VNVLQGLKQGGRIFINSVEAKDFPGFSTCHADLTGIAQKENIIVAGYTILNTPMLGCLAKMGIISLDSARKSILEMFPDE CNVRAAEAGYREMKL
Specific function: Unknown
COG id: COG1014
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011894 - InterPro: IPR019752 - InterPro: IPR002869 [H]
Pfam domain/function: PF01558 POR [H]
EC number: =1.2.7.1 [H]
Molecular weight: Translated: 19103; Mature: 19103
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEIRIHSRGGQGGVTGARLLALAAIHDGKYATASVFYGPQRRGAPVMSFVRIDDRPIRI CEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEEECCCCEEE YSRIKEPDMVVILDASVMDMVNVLQGLKQGGRIFINSVEAKDFPGFSTCHADLTGIAQKE EHHCCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCC NIIVAGYTILNTPMLGCLAKMGIISLDSARKSILEMFPDECNVRAAEAGYREMKL CEEEEEHHHHHCHHHHHHHHHCEEEEHHHHHHHHHHCCCCCCEEECCCCCHHCCC >Mature Secondary Structure MLEIRIHSRGGQGGVTGARLLALAAIHDGKYATASVFYGPQRRGAPVMSFVRIDDRPIRI CEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEEECCCCEEE YSRIKEPDMVVILDASVMDMVNVLQGLKQGGRIFINSVEAKDFPGFSTCHADLTGIAQKE EHHCCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCC NIIVAGYTILNTPMLGCLAKMGIISLDSARKSILEMFPDECNVRAAEAGYREMKL CEEEEEHHHHHCHHHHHHHHHCEEEEHHHHHHHHHHCCCCCCEEECCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]