| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859936
Identifier: 85859936
GI number: 85859936
Start: 2170160
End: 2170480
Strand: Direct
Name: 85859936
Synonym: SYN_03095
Alternate gene names: NA
Gene position: 2170160-2170480 (Clockwise)
Preceding gene: 85859935
Following gene: 85859940
Centisome position: 68.26
GC content: 46.11
Gene sequence:
>321_bases ATGAAAAATTCAGAAATTTCAGACTGGCTGGATCAGAAGGAAGCTGAAGGCGTCGATGTATCACAGATTGTACTGCCTGA TGACCTCTCTTATGAAGAAGATCCCGATGAAACAATTTATTATAAGGAAATCAACCCCTGCGGGATCCTCTGCAAAGGCA ATCATCCATTCTCGACGGTCGAGCGTTTCGGACACTGGTATTTCAGCAGGGGGCAGGACAAGAGAGCCGGAATTCACTCT TCGGACACTCAGTGGCATTGGAGATTGTTTACAAAGGATAAGGCTCTTGCTGTCGAAACGGCCAGATCACACATCGAATA A
Upstream 100 bases:
>100_bases AGCTCTCAGGACGCAAAAAATCCGGCATTTGTCTTTGTGATCCTAAAAAAATGAAAAATATTAATTATTTTGAATCCAGG ATTTACAAAAGGCAACTCTA
Downstream 100 bases:
>100_bases ACAGAAAGCGGAATCCGATATCAAGTCCGCCGCGGAATATTCCCCCCGGACCATGCCAGCTTCAGTCCTGCTCAGAACGA TTCAAATCCTTGATTTATCT
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MKNSEISDWLDQKEAEGVDVSQIVLPDDLSYEEDPDETIYYKEINPCGILCKGNHPFSTVERFGHWYFSRGQDKRAGIHS SDTQWHWRLFTKDKALAVETARSHIE
Sequences:
>Translated_106_residues MKNSEISDWLDQKEAEGVDVSQIVLPDDLSYEEDPDETIYYKEINPCGILCKGNHPFSTVERFGHWYFSRGQDKRAGIHS SDTQWHWRLFTKDKALAVETARSHIE >Mature_106_residues MKNSEISDWLDQKEAEGVDVSQIVLPDDLSYEEDPDETIYYKEINPCGILCKGNHPFSTVERFGHWYFSRGQDKRAGIHS SDTQWHWRLFTKDKALAVETARSHIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12345; Mature: 12345
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSEISDWLDQKEAEGVDVSQIVLPDDLSYEEDPDETIYYKEINPCGILCKGNHPFSTV CCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEECCCCHHHH ERFGHWYFSRGQDKRAGIHSSDTQWHWRLFTKDKALAVETARSHIE HHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCEEHHHHHHHHCC >Mature Secondary Structure MKNSEISDWLDQKEAEGVDVSQIVLPDDLSYEEDPDETIYYKEINPCGILCKGNHPFSTV CCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEECCCCHHHH ERFGHWYFSRGQDKRAGIHSSDTQWHWRLFTKDKALAVETARSHIE HHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA