| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is sarZ [H]
Identifier: 85859906
GI number: 85859906
Start: 2140888
End: 2141331
Strand: Direct
Name: sarZ [H]
Synonym: SYN_00652
Alternate gene names: 85859906
Gene position: 2140888-2141331 (Clockwise)
Preceding gene: 85859889
Following gene: 85859907
Centisome position: 67.34
GC content: 40.32
Gene sequence:
>444_bases TTGGAAAAGGAGGATACATTGCCCTTTAACGATTGTATATGCTTTCAATTGGGTAAAACAGTACGCCAAATAACAAAAGC ATACCGCAAAGAACTCAACTCTTATAATCTGACTCATGGACAATTTTTCATGATCATTGCCGTCATGGATGAGGAAGGAT TATTGCCCAGCGAACTTGCCGACAAAACCGCACAGGACCGCGCAACTACAACAGGGCTTCTTGACCGTCTGGAAAAAGAT GGATGGATTGAAAGAAAACCGGATTCAAAAGATCGCCGGTCTTTGCGCGTTTATCTGACATCTTACGGAAGGCATCACAA AGAATCGATTTTAAAACTTTTTGAAGAAACCAATCACAAGTTTTTAAATCGTTTTACTCAAGATGAGTGGGTTCAGATGC AGAATTTGCTTAACCGATTAGAACAACCAATGGCAAATACCTGA
Upstream 100 bases:
>100_bases CTTTAATTATCATAAACAATGGCAATTCCTTTTACTGCTTGCCTTATAAATATAGTTTGCGTTTTAATTATATGCATGTT AATTAAACATTAATTACAGG
Downstream 100 bases:
>100_bases TTTCCTCCGATTTGATATCGTTATTAACATGAAGCAGATAACATTCTGAGTCTTGAGCAGTAGCAGGTGCAAGGTCTAAT GCAGTTTTATGACGCTGCCT
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Staphylococcal accessory regulator Z [H]
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MEKEDTLPFNDCICFQLGKTVRQITKAYRKELNSYNLTHGQFFMIIAVMDEEGLLPSELADKTAQDRATTTGLLDRLEKD GWIERKPDSKDRRSLRVYLTSYGRHHKESILKLFEETNHKFLNRFTQDEWVQMQNLLNRLEQPMANT
Sequences:
>Translated_147_residues MEKEDTLPFNDCICFQLGKTVRQITKAYRKELNSYNLTHGQFFMIIAVMDEEGLLPSELADKTAQDRATTTGLLDRLEKD GWIERKPDSKDRRSLRVYLTSYGRHHKESILKLFEETNHKFLNRFTQDEWVQMQNLLNRLEQPMANT >Mature_147_residues MEKEDTLPFNDCICFQLGKTVRQITKAYRKELNSYNLTHGQFFMIIAVMDEEGLLPSELADKTAQDRATTTGLLDRLEKD GWIERKPDSKDRRSLRVYLTSYGRHHKESILKLFEETNHKFLNRFTQDEWVQMQNLLNRLEQPMANT
Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH marR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000835 - InterPro: IPR011991 [H]
Pfam domain/function: PF01047 MarR [H]
EC number: NA
Molecular weight: Translated: 17385; Mature: 17385
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKEDTLPFNDCICFQLGKTVRQITKAYRKELNSYNLTHGQFFMIIAVMDEEGLLPSELA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCHHHHH DKTAQDRATTTGLLDRLEKDGWIERKPDSKDRRSLRVYLTSYGRHHKESILKLFEETNHK HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH FLNRFTQDEWVQMQNLLNRLEQPMANT HHHHHCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEKEDTLPFNDCICFQLGKTVRQITKAYRKELNSYNLTHGQFFMIIAVMDEEGLLPSELA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCHHHHH DKTAQDRATTTGLLDRLEKDGWIERKPDSKDRRSLRVYLTSYGRHHKESILKLFEETNHK HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH FLNRFTQDEWVQMQNLLNRLEQPMANT HHHHHCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA