Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85859771

Identifier: 85859771

GI number: 85859771

Start: 2005717

End: 2006217

Strand: Direct

Name: 85859771

Synonym: SYN_02871

Alternate gene names: NA

Gene position: 2005717-2006217 (Clockwise)

Preceding gene: 85859770

Following gene: 85859774

Centisome position: 63.09

GC content: 53.89

Gene sequence:

>501_bases
ATGACCGGCCACACCGGCACATCGTTTCCGGAATCCCGGCAGTTTAAAGATCCGGAAAAGCAAACTCGGCAGAAAGGAGC
AATTTTAACATTGGATGAGGAAGCGATCAGAAACAGAACACAGGAAACCGCGAAAAAACTCTTCGGCAAAGGGGTCAAGA
TGGATCCACCTTACCTGACATGGAAAGCTTTCGACCGTGAGCTGGCCAATGATTTCTCCATGTTTATCACGGGAAATCTG
TACTCCCGTACGGTGCTGACCCTGCCGGAGCGGCAGATGGCCGCCTGCGCCATTTTAGGAGCAATTCGGGCGACGGACGA
ACTGAAGCTCCATGTGAATGCAGCTCTGAATGTGGGATGCGACCCCAGGAAACTGACAGAGATTTTCTTTCAGATGGCCC
CCTACGCGGGCATGCCCGCTGTCAACGAGGCGCTTGCCGTCTTCCGGGAAGTTCTTGAAGAACGGGAAGAATGGCCAATT
GCCCGGGAAACAGCCCCCTGA

Upstream 100 bases:

>100_bases
GCCGCCGCGAAGGCGAAAGCGCGTATGACAAGGCGCAGAAAAAAGACGGATATCAGCACATCTACCTTCAGGATAAGGAC
AGAGACCTGTACCTGGTTAA

Downstream 100 bases:

>100_bases
GCAAAGCATCCCCTCATACATCAGGAGGCGCGTCAATTCTTCAGCCTTCAACAACAGCTTCACGGAAAGGTCTTTTGATG
GAGACGGCCAGGGGAGAAAC

Product: gamma-carboxymuconolactone decarboxylase

Products: 4,5-dihydro-5-oxofuran-2-acetate; CO2

Alternate protein names: Gamma-Carboxymuconolactone Decarboxylase; 4-Carboxymuconolactone Decarboxylase; Carboxymuconolactone Decarboxylase Family Protein; Carboxymuconolactone Decarboxylase Protein

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MTGHTGTSFPESRQFKDPEKQTRQKGAILTLDEEAIRNRTQETAKKLFGKGVKMDPPYLTWKAFDRELANDFSMFITGNL
YSRTVLTLPERQMAACAILGAIRATDELKLHVNAALNVGCDPRKLTEIFFQMAPYAGMPAVNEALAVFREVLEEREEWPI
ARETAP

Sequences:

>Translated_166_residues
MTGHTGTSFPESRQFKDPEKQTRQKGAILTLDEEAIRNRTQETAKKLFGKGVKMDPPYLTWKAFDRELANDFSMFITGNL
YSRTVLTLPERQMAACAILGAIRATDELKLHVNAALNVGCDPRKLTEIFFQMAPYAGMPAVNEALAVFREVLEEREEWPI
ARETAP
>Mature_165_residues
TGHTGTSFPESRQFKDPEKQTRQKGAILTLDEEAIRNRTQETAKKLFGKGVKMDPPYLTWKAFDRELANDFSMFITGNLY
SRTVLTLPERQMAACAILGAIRATDELKLHVNAALNVGCDPRKLTEIFFQMAPYAGMPAVNEALAVFREVLEEREEWPIA
RETAP

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 4.1.1.44

Molecular weight: Translated: 18736; Mature: 18604

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGHTGTSFPESRQFKDPEKQTRQKGAILTLDEEAIRNRTQETAKKLFGKGVKMDPPYLT
CCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCEEH
WKAFDRELANDFSMFITGNLYSRTVLTLPERQMAACAILGAIRATDELKLHVNAALNVGC
HHHHHHHHHCCHHEEEECCCCCCEEEECCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCC
DPRKLTEIFFQMAPYAGMPAVNEALAVFREVLEEREEWPIARETAP
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TGHTGTSFPESRQFKDPEKQTRQKGAILTLDEEAIRNRTQETAKKLFGKGVKMDPPYLT
CCCCCCCCCCCCCCCCHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCEEH
WKAFDRELANDFSMFITGNLYSRTVLTLPERQMAACAILGAIRATDELKLHVNAALNVGC
HHHHHHHHHCCHHEEEECCCCCCEEEECCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCC
DPRKLTEIFFQMAPYAGMPAVNEALAVFREVLEEREEWPIARETAP
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-carboxy-2,5-dihydro-5-oxofuran-2-acetate

Specific reaction: 2-carboxy-2,5-dihydro-5-oxofuran-2-acetate = 4,5-dihydro-5-oxofuran-2-acetate + CO2

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA