| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859722
Identifier: 85859722
GI number: 85859722
Start: 1950565
End: 1951536
Strand: Direct
Name: 85859722
Synonym: SYN_00642
Alternate gene names: NA
Gene position: 1950565-1951536 (Clockwise)
Preceding gene: 85859721
Following gene: 85859723
Centisome position: 61.35
GC content: 47.12
Gene sequence:
>972_bases GTGTTGAGTAACAAAGGAAAGGGGATCAGTCTCAGAGACTTTCTGGCGGGCGTTGTCATATCGACGCTTTTTTTAATTTT TTCCGGAATGTCGCCGCTTTCTGCCTCTCTTCTGCTCTTTATCGCGCCTCTGCCCATTTTTTATTATTACACCAAACTCG GGAGGAACCACGGGCTTCTTCTGGTTCTTGCGACTCTGCTGATCTCCTTCTCAACCCTGGAAGCACTGAACCGTGGGGCA TATGTACCGCTTCTTTGCCTGTTCACTTCTCTGGGGGTCATTCTTGCTGAGATTGTAAAGAAAAAAGTCTCAATCGAAAT AACGATCCTGGCATCGGTCGCGGTCTTTACAATCCCCCTTCTTGTCCTGATCGCCTACTTGACGATCAAAGCAGGGGAAG CACCATGGCGGCTGATGGAACCCTACATGGTTAACGCCATTCTGGAGAGTGTTCAACATTATTCCGAAATGGGCGTTCCA ACTGAGCAGGTCACCTTGCTCAAAGACAACGCGCGGAAGATCGCCGTCTTTTTTATCAGGATACTGCCTGCTTTAGGAAT CGTCAGCATAGCACTGTGCAGCTGGCTGAATCTTCTGGCGGCGAGGATGATATTTAACCGCCGTAATCTTGATTTTCCCG ATTTTGGCGACCTTGCCGGATGGAAATCTCCGGAAAAGCTTGTTTGGATCCTTATTTCAAGCGGGGCAATGCTTTTGATT CCCGACGACAGATTTCATTACGTCGGACTGAATTTGCTCATTATATGTCTATTTGTGTACCTGCTTCATGGACTGGCGAT TGTCAGTTTTTTCTTCAGGAAAAAGAATGTCCCTGTGTTCCTGAGAACTCTGTTTTATGTTCTGCTGATATTCCAGCAGA TGTTCATTCTTCCGGTCATCGCCGCGGGTCTTTTTGACCTGTGGATCGACTTCAGAAAATTCAATAAAAAGACAAGCGAT TCCGCGGCTTGA
Upstream 100 bases:
>100_bases ACGGTAATCAATTCGATGTTTTCGGGGGCATTTCCCGAATTCCGGGGAATGCCCTTTTTGAATTTCTGTCTTTGCATGCA TGGCAAGATAACGGGTTGTG
Downstream 100 bases:
>100_bases ACATCCATTGCGGCCGCACTGAGCGCTTTTTTACAGGAGGGTTGATTCATGAAAATCATTTTGAAAGAAAACTTCGAAAC GCTTGGAAAAGCAGGTGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MLSNKGKGISLRDFLAGVVISTLFLIFSGMSPLSASLLLFIAPLPIFYYYTKLGRNHGLLLVLATLLISFSTLEALNRGA YVPLLCLFTSLGVILAEIVKKKVSIEITILASVAVFTIPLLVLIAYLTIKAGEAPWRLMEPYMVNAILESVQHYSEMGVP TEQVTLLKDNARKIAVFFIRILPALGIVSIALCSWLNLLAARMIFNRRNLDFPDFGDLAGWKSPEKLVWILISSGAMLLI PDDRFHYVGLNLLIICLFVYLLHGLAIVSFFFRKKNVPVFLRTLFYVLLIFQQMFILPVIAAGLFDLWIDFRKFNKKTSD SAA
Sequences:
>Translated_323_residues MLSNKGKGISLRDFLAGVVISTLFLIFSGMSPLSASLLLFIAPLPIFYYYTKLGRNHGLLLVLATLLISFSTLEALNRGA YVPLLCLFTSLGVILAEIVKKKVSIEITILASVAVFTIPLLVLIAYLTIKAGEAPWRLMEPYMVNAILESVQHYSEMGVP TEQVTLLKDNARKIAVFFIRILPALGIVSIALCSWLNLLAARMIFNRRNLDFPDFGDLAGWKSPEKLVWILISSGAMLLI PDDRFHYVGLNLLIICLFVYLLHGLAIVSFFFRKKNVPVFLRTLFYVLLIFQQMFILPVIAAGLFDLWIDFRKFNKKTSD SAA >Mature_323_residues MLSNKGKGISLRDFLAGVVISTLFLIFSGMSPLSASLLLFIAPLPIFYYYTKLGRNHGLLLVLATLLISFSTLEALNRGA YVPLLCLFTSLGVILAEIVKKKVSIEITILASVAVFTIPLLVLIAYLTIKAGEAPWRLMEPYMVNAILESVQHYSEMGVP TEQVTLLKDNARKIAVFFIRILPALGIVSIALCSWLNLLAARMIFNRRNLDFPDFGDLAGWKSPEKLVWILISSGAMLLI PDDRFHYVGLNLLIICLFVYLLHGLAIVSFFFRKKNVPVFLRTLFYVLLIFQQMFILPVIAAGLFDLWIDFRKFNKKTSD SAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36200; Mature: 36200
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSNKGKGISLRDFLAGVVISTLFLIFSGMSPLSASLLLFIAPLPIFYYYTKLGRNHGLL CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LVLATLLISFSTLEALNRGAYVPLLCLFTSLGVILAEIVKKKVSIEITILASVAVFTIPL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHHHHH LVLIAYLTIKAGEAPWRLMEPYMVNAILESVQHYSEMGVPTEQVTLLKDNARKIAVFFIR HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEECCCHHHHHHHHHH ILPALGIVSIALCSWLNLLAARMIFNRRNLDFPDFGDLAGWKSPEKLVWILISSGAMLLI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEE PDDRFHYVGLNLLIICLFVYLLHGLAIVSFFFRKKNVPVFLRTLFYVLLIFQQMFILPVI ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH AAGLFDLWIDFRKFNKKTSDSAA HHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLSNKGKGISLRDFLAGVVISTLFLIFSGMSPLSASLLLFIAPLPIFYYYTKLGRNHGLL CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LVLATLLISFSTLEALNRGAYVPLLCLFTSLGVILAEIVKKKVSIEITILASVAVFTIPL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHHHHH LVLIAYLTIKAGEAPWRLMEPYMVNAILESVQHYSEMGVPTEQVTLLKDNARKIAVFFIR HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEECCCHHHHHHHHHH ILPALGIVSIALCSWLNLLAARMIFNRRNLDFPDFGDLAGWKSPEKLVWILISSGAMLLI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEE PDDRFHYVGLNLLIICLFVYLLHGLAIVSFFFRKKNVPVFLRTLFYVLLIFQQMFILPVI ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH AAGLFDLWIDFRKFNKKTSDSAA HHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA