Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

Click here to switch to the map view.

The map label for this gene is 85859722

Identifier: 85859722

GI number: 85859722

Start: 1950565

End: 1951536

Strand: Direct

Name: 85859722

Synonym: SYN_00642

Alternate gene names: NA

Gene position: 1950565-1951536 (Clockwise)

Preceding gene: 85859721

Following gene: 85859723

Centisome position: 61.35

GC content: 47.12

Gene sequence:

>972_bases
GTGTTGAGTAACAAAGGAAAGGGGATCAGTCTCAGAGACTTTCTGGCGGGCGTTGTCATATCGACGCTTTTTTTAATTTT
TTCCGGAATGTCGCCGCTTTCTGCCTCTCTTCTGCTCTTTATCGCGCCTCTGCCCATTTTTTATTATTACACCAAACTCG
GGAGGAACCACGGGCTTCTTCTGGTTCTTGCGACTCTGCTGATCTCCTTCTCAACCCTGGAAGCACTGAACCGTGGGGCA
TATGTACCGCTTCTTTGCCTGTTCACTTCTCTGGGGGTCATTCTTGCTGAGATTGTAAAGAAAAAAGTCTCAATCGAAAT
AACGATCCTGGCATCGGTCGCGGTCTTTACAATCCCCCTTCTTGTCCTGATCGCCTACTTGACGATCAAAGCAGGGGAAG
CACCATGGCGGCTGATGGAACCCTACATGGTTAACGCCATTCTGGAGAGTGTTCAACATTATTCCGAAATGGGCGTTCCA
ACTGAGCAGGTCACCTTGCTCAAAGACAACGCGCGGAAGATCGCCGTCTTTTTTATCAGGATACTGCCTGCTTTAGGAAT
CGTCAGCATAGCACTGTGCAGCTGGCTGAATCTTCTGGCGGCGAGGATGATATTTAACCGCCGTAATCTTGATTTTCCCG
ATTTTGGCGACCTTGCCGGATGGAAATCTCCGGAAAAGCTTGTTTGGATCCTTATTTCAAGCGGGGCAATGCTTTTGATT
CCCGACGACAGATTTCATTACGTCGGACTGAATTTGCTCATTATATGTCTATTTGTGTACCTGCTTCATGGACTGGCGAT
TGTCAGTTTTTTCTTCAGGAAAAAGAATGTCCCTGTGTTCCTGAGAACTCTGTTTTATGTTCTGCTGATATTCCAGCAGA
TGTTCATTCTTCCGGTCATCGCCGCGGGTCTTTTTGACCTGTGGATCGACTTCAGAAAATTCAATAAAAAGACAAGCGAT
TCCGCGGCTTGA

Upstream 100 bases:

>100_bases
ACGGTAATCAATTCGATGTTTTCGGGGGCATTTCCCGAATTCCGGGGAATGCCCTTTTTGAATTTCTGTCTTTGCATGCA
TGGCAAGATAACGGGTTGTG

Downstream 100 bases:

>100_bases
ACATCCATTGCGGCCGCACTGAGCGCTTTTTTACAGGAGGGTTGATTCATGAAAATCATTTTGAAAGAAAACTTCGAAAC
GCTTGGAAAAGCAGGTGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MLSNKGKGISLRDFLAGVVISTLFLIFSGMSPLSASLLLFIAPLPIFYYYTKLGRNHGLLLVLATLLISFSTLEALNRGA
YVPLLCLFTSLGVILAEIVKKKVSIEITILASVAVFTIPLLVLIAYLTIKAGEAPWRLMEPYMVNAILESVQHYSEMGVP
TEQVTLLKDNARKIAVFFIRILPALGIVSIALCSWLNLLAARMIFNRRNLDFPDFGDLAGWKSPEKLVWILISSGAMLLI
PDDRFHYVGLNLLIICLFVYLLHGLAIVSFFFRKKNVPVFLRTLFYVLLIFQQMFILPVIAAGLFDLWIDFRKFNKKTSD
SAA

Sequences:

>Translated_323_residues
MLSNKGKGISLRDFLAGVVISTLFLIFSGMSPLSASLLLFIAPLPIFYYYTKLGRNHGLLLVLATLLISFSTLEALNRGA
YVPLLCLFTSLGVILAEIVKKKVSIEITILASVAVFTIPLLVLIAYLTIKAGEAPWRLMEPYMVNAILESVQHYSEMGVP
TEQVTLLKDNARKIAVFFIRILPALGIVSIALCSWLNLLAARMIFNRRNLDFPDFGDLAGWKSPEKLVWILISSGAMLLI
PDDRFHYVGLNLLIICLFVYLLHGLAIVSFFFRKKNVPVFLRTLFYVLLIFQQMFILPVIAAGLFDLWIDFRKFNKKTSD
SAA
>Mature_323_residues
MLSNKGKGISLRDFLAGVVISTLFLIFSGMSPLSASLLLFIAPLPIFYYYTKLGRNHGLLLVLATLLISFSTLEALNRGA
YVPLLCLFTSLGVILAEIVKKKVSIEITILASVAVFTIPLLVLIAYLTIKAGEAPWRLMEPYMVNAILESVQHYSEMGVP
TEQVTLLKDNARKIAVFFIRILPALGIVSIALCSWLNLLAARMIFNRRNLDFPDFGDLAGWKSPEKLVWILISSGAMLLI
PDDRFHYVGLNLLIICLFVYLLHGLAIVSFFFRKKNVPVFLRTLFYVLLIFQQMFILPVIAAGLFDLWIDFRKFNKKTSD
SAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36200; Mature: 36200

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSNKGKGISLRDFLAGVVISTLFLIFSGMSPLSASLLLFIAPLPIFYYYTKLGRNHGLL
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LVLATLLISFSTLEALNRGAYVPLLCLFTSLGVILAEIVKKKVSIEITILASVAVFTIPL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHHHHH
LVLIAYLTIKAGEAPWRLMEPYMVNAILESVQHYSEMGVPTEQVTLLKDNARKIAVFFIR
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEECCCHHHHHHHHHH
ILPALGIVSIALCSWLNLLAARMIFNRRNLDFPDFGDLAGWKSPEKLVWILISSGAMLLI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEE
PDDRFHYVGLNLLIICLFVYLLHGLAIVSFFFRKKNVPVFLRTLFYVLLIFQQMFILPVI
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
AAGLFDLWIDFRKFNKKTSDSAA
HHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLSNKGKGISLRDFLAGVVISTLFLIFSGMSPLSASLLLFIAPLPIFYYYTKLGRNHGLL
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LVLATLLISFSTLEALNRGAYVPLLCLFTSLGVILAEIVKKKVSIEITILASVAVFTIPL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHHHHH
LVLIAYLTIKAGEAPWRLMEPYMVNAILESVQHYSEMGVPTEQVTLLKDNARKIAVFFIR
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEECCCHHHHHHHHHH
ILPALGIVSIALCSWLNLLAARMIFNRRNLDFPDFGDLAGWKSPEKLVWILISSGAMLLI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEE
PDDRFHYVGLNLLIICLFVYLLHGLAIVSFFFRKKNVPVFLRTLFYVLLIFQQMFILPVI
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
AAGLFDLWIDFRKFNKKTSDSAA
HHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA