Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85859681

Identifier: 85859681

GI number: 85859681

Start: 1910434

End: 1911372

Strand: Direct

Name: 85859681

Synonym: SYN_01082

Alternate gene names: NA

Gene position: 1910434-1911372 (Clockwise)

Preceding gene: 85859680

Following gene: 85859682

Centisome position: 60.09

GC content: 47.71

Gene sequence:

>939_bases
ATGACAGAGCGCATACAAGCCGCGGACGATCTTCTTCTCAGATGGCATGAGCTGGAGCGTCACACTGAACGGCTGAAAAA
TGATCTGATCCGGATGGATACGGATATAGACCTTAAAAAGGCCGAGTCAGCCTATGCGTCGCTGATGCGTCTGTATGTTA
TGCAGCTTTCTTTGCGGGCGCAGGCGGAAGACATTATTCAAACAATTCCGGATTACGATCCGGATTATGAACTGGCATCA
GAAATTCGAATCCTTATTGCGCTCATCGAAATTCTTTTCTCACCGAGATTTGACATAACAGGAAAATATGGGAAAAGCGT
GGCTGAGGCATTTCGCGACTCAGGAATTCCCTTATCCCGCCAGCTCGCATTCCTGGTTCTGGCGGCATTTTGCGAACTGT
ATCTGCAGCATGCCAAAAATAAAAATGCCATATTTCCGCTGAACGAATGGCTCTGCTTCAAATCAGTATGCGCTCAGTGC
CTGTCTGATTATCTGGATTGCATCGATCAAATCTGTTCTGTCTATGATCAGCATTTGTCATTCAGCAAAGATTTGGCGTC
CCATGAAGAAATCACCCTGGCCCTCAAGGAACTCGTCAAGATTGGCTGGGAGAGACACCAGGGCCTCCGGATAGCAAAAT
TTCTGTATCAGCGTGCACATGGGCAGGAAACGGAGGAGGACGAACGCGTATTGTCAGAAGAGGTGCGAAACAATTTAGCG
AAGTTCAACATTCGCCTCAAACGAAGGATGAAGCTTACCTGCATAACAGGCTTCGTTTCCGGATATTGCACGGAACGTGG
CTGCCCGAAGCGTTTTGTTGTACAGGCGGAGATTCGCAATCAGTTGAGAGCGCTTGAACCGGCCATCTGTCCGGAATGTG
GTATTGCAATCATCCCCGAGAAAATCATGACAATCCTAAAAGGTGAACTCAAAGAGTAA

Upstream 100 bases:

>100_bases
GGAACAAACGGGAATCAAAGGCTGTGATAGCCATAGATTAAAATCGATAAATTTTTGTCATGGATTTTTTACAGTTATAC
TCATATGTGCTGAGCAAACA

Downstream 100 bases:

>100_bases
GTTTCCGTCAATCATTGAATTTTCGTAACTGAAAGTTACTCTGTCCCTATATGGTTATCTCCGGGCAAATGTAAAAATAG
AGAGGCCTGAAATTCAACTT

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MTERIQAADDLLLRWHELERHTERLKNDLIRMDTDIDLKKAESAYASLMRLYVMQLSLRAQAEDIIQTIPDYDPDYELAS
EIRILIALIEILFSPRFDITGKYGKSVAEAFRDSGIPLSRQLAFLVLAAFCELYLQHAKNKNAIFPLNEWLCFKSVCAQC
LSDYLDCIDQICSVYDQHLSFSKDLASHEEITLALKELVKIGWERHQGLRIAKFLYQRAHGQETEEDERVLSEEVRNNLA
KFNIRLKRRMKLTCITGFVSGYCTERGCPKRFVVQAEIRNQLRALEPAICPECGIAIIPEKIMTILKGELKE

Sequences:

>Translated_312_residues
MTERIQAADDLLLRWHELERHTERLKNDLIRMDTDIDLKKAESAYASLMRLYVMQLSLRAQAEDIIQTIPDYDPDYELAS
EIRILIALIEILFSPRFDITGKYGKSVAEAFRDSGIPLSRQLAFLVLAAFCELYLQHAKNKNAIFPLNEWLCFKSVCAQC
LSDYLDCIDQICSVYDQHLSFSKDLASHEEITLALKELVKIGWERHQGLRIAKFLYQRAHGQETEEDERVLSEEVRNNLA
KFNIRLKRRMKLTCITGFVSGYCTERGCPKRFVVQAEIRNQLRALEPAICPECGIAIIPEKIMTILKGELKE
>Mature_311_residues
TERIQAADDLLLRWHELERHTERLKNDLIRMDTDIDLKKAESAYASLMRLYVMQLSLRAQAEDIIQTIPDYDPDYELASE
IRILIALIEILFSPRFDITGKYGKSVAEAFRDSGIPLSRQLAFLVLAAFCELYLQHAKNKNAIFPLNEWLCFKSVCAQCL
SDYLDCIDQICSVYDQHLSFSKDLASHEEITLALKELVKIGWERHQGLRIAKFLYQRAHGQETEEDERVLSEEVRNNLAK
FNIRLKRRMKLTCITGFVSGYCTERGCPKRFVVQAEIRNQLRALEPAICPECGIAIIPEKIMTILKGELKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36047; Mature: 35916

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTERIQAADDLLLRWHELERHTERLKNDLIRMDTDIDLKKAESAYASLMRLYVMQLSLRA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QAEDIIQTIPDYDPDYELASEIRILIALIEILFSPRFDITGKYGKSVAEAFRDSGIPLSR
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHH
QLAFLVLAAFCELYLQHAKNKNAIFPLNEWLCFKSVCAQCLSDYLDCIDQICSVYDQHLS
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSKDLASHEEITLALKELVKIGWERHQGLRIAKFLYQRAHGQETEEDERVLSEEVRNNLA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
KFNIRLKRRMKLTCITGFVSGYCTERGCPKRFVVQAEIRNQLRALEPAICPECGIAIIPE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
KIMTILKGELKE
HHHHHHHHHCCC
>Mature Secondary Structure 
TERIQAADDLLLRWHELERHTERLKNDLIRMDTDIDLKKAESAYASLMRLYVMQLSLRA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QAEDIIQTIPDYDPDYELASEIRILIALIEILFSPRFDITGKYGKSVAEAFRDSGIPLSR
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHH
QLAFLVLAAFCELYLQHAKNKNAIFPLNEWLCFKSVCAQCLSDYLDCIDQICSVYDQHLS
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSKDLASHEEITLALKELVKIGWERHQGLRIAKFLYQRAHGQETEEDERVLSEEVRNNLA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
KFNIRLKRRMKLTCITGFVSGYCTERGCPKRFVVQAEIRNQLRALEPAICPECGIAIIPE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
KIMTILKGELKE
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA