| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859677
Identifier: 85859677
GI number: 85859677
Start: 1907409
End: 1908143
Strand: Direct
Name: 85859677
Synonym: SYN_02997
Alternate gene names: NA
Gene position: 1907409-1908143 (Clockwise)
Preceding gene: 85859676
Following gene: 85859678
Centisome position: 59.99
GC content: 52.79
Gene sequence:
>735_bases TTGAATGCCGCTCTACATGCGGAGGTAGAACATGAAAAAGATAACAGCTTGTATAGCTTCAGTCATAGTGATGCTCTTCA CAAGTCCTGTAATCGACCAGGGCATTCGGTCAAGGCGGACATCGCGCCGGAGGCGGCTCTCATGGAGGAAGTCCTGTGTA TCGCGGGAGCAGCCCTCGAACCGGAAGCCCTGGCTATCGCGGAAGCAGTCCTCGAACCGGAAGCCCTGGCTATCACAGAG GCGGCAGTGTTTATTACCGCGGATTCAGACCTTACACGAGACCTCCTTTTTACCGCGGCGGAAGCCCTTATGGCAGTCGT TATCATGGTCGGGCTGGTTATTATTATCCCGGAGGTCGTTATTACGGCCGGGGAGCATATCATCATAGAGCTTACTGGCA CGGAAGTGTCTGGATTGGCGCCGGGTTTGGCTGGTACGGATGGGGGCCGTCATGGTGGTGGGGTTACCCGTACTATTCAT ATTATTATCCATACTATTATGTCCCGTATTATTCTTATTACTATCCTTACTACGCAGTCCCGCCCACGGTGCAACCGGCC CCGGACCCGTCAACAGAAAAGCACTTTATATATCCACGAGAGGGCCAGAGTGAAAAGCAACAGGCGGAAGATCAATATCA GTGCCACCGCTGGGCGGTTGAAAAAACCGGCTTTGATCCAACAACAGTCAAGCCGGGAGAACAGGAAGGTCAGAGCCAGG CGAATCGTTTATTGA
Upstream 100 bases:
>100_bases CCCAGCATATGCGGACTCTGTTATTTGACGCTGATGGAAAGCAGGTTTAAAATCATAAAATAAACATTACTCTTTGTTTG CAGGGTAAGATGGCAGCATT
Downstream 100 bases:
>100_bases ATGACTACTGGAATGCAATGAGCACCTGCCTCGACGCTCTCGGGTACACAGTGAAATAATTGCATTCAATAAAACTATCA TCTGTGGTGGATATTTAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MNAALHAEVEHEKDNSLYSFSHSDALHKSCNRPGHSVKADIAPEAALMEEVLCIAGAALEPEALAIAEAVLEPEALAITE AAVFITADSDLTRDLLFTAAEALMAVVIMVGLVIIIPEVVITAGEHIIIELTGTEVSGLAPGLAGTDGGRHGGGVTRTIH IIIHTIMSRIILITILTTQSRPRCNRPRTRQQKSTLYIHERARVKSNRRKINISATAGRLKKPALIQQQSSRENRKVRAR RIVY
Sequences:
>Translated_244_residues MNAALHAEVEHEKDNSLYSFSHSDALHKSCNRPGHSVKADIAPEAALMEEVLCIAGAALEPEALAIAEAVLEPEALAITE AAVFITADSDLTRDLLFTAAEALMAVVIMVGLVIIIPEVVITAGEHIIIELTGTEVSGLAPGLAGTDGGRHGGGVTRTIH IIIHTIMSRIILITILTTQSRPRCNRPRTRQQKSTLYIHERARVKSNRRKINISATAGRLKKPALIQQQSSRENRKVRAR RIVY >Mature_244_residues MNAALHAEVEHEKDNSLYSFSHSDALHKSCNRPGHSVKADIAPEAALMEEVLCIAGAALEPEALAIAEAVLEPEALAITE AAVFITADSDLTRDLLFTAAEALMAVVIMVGLVIIIPEVVITAGEHIIIELTGTEVSGLAPGLAGTDGGRHGGGVTRTIH IIIHTIMSRIILITILTTQSRPRCNRPRTRQQKSTLYIHERARVKSNRRKINISATAGRLKKPALIQQQSSRENRKVRAR RIVY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26493; Mature: 26493
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAALHAEVEHEKDNSLYSFSHSDALHKSCNRPGHSVKADIAPEAALMEEVLCIAGAALE CCCCCCCEECCCCCCCEEEECCCHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHCCCCC PEALAIAEAVLEPEALAITEAAVFITADSDLTRDLLFTAAEALMAVVIMVGLVIIIPEVV CHHHHHHHHHHCCHHHEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITAGEHIIIELTGTEVSGLAPGLAGTDGGRHGGGVTRTIHIIIHTIMSRIILITILTTQS HHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC RPRCNRPRTRQQKSTLYIHERARVKSNRRKINISATAGRLKKPALIQQQSSRENRKVRAR CCCCCCCCCHHHHCEEEEEHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH RIVY HCCC >Mature Secondary Structure MNAALHAEVEHEKDNSLYSFSHSDALHKSCNRPGHSVKADIAPEAALMEEVLCIAGAALE CCCCCCCEECCCCCCCEEEECCCHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHCCCCC PEALAIAEAVLEPEALAITEAAVFITADSDLTRDLLFTAAEALMAVVIMVGLVIIIPEVV CHHHHHHHHHHCCHHHEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITAGEHIIIELTGTEVSGLAPGLAGTDGGRHGGGVTRTIHIIIHTIMSRIILITILTTQS HHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC RPRCNRPRTRQQKSTLYIHERARVKSNRRKINISATAGRLKKPALIQQQSSRENRKVRAR CCCCCCCCCHHHHCEEEEEHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH RIVY HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA