| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is hrb [H]
Identifier: 85859673
GI number: 85859673
Start: 1904950
End: 1905429
Strand: Direct
Name: hrb [H]
Synonym: SYN_02764
Alternate gene names: 85859673
Gene position: 1904950-1905429 (Clockwise)
Preceding gene: 85859672
Following gene: 85859674
Centisome position: 59.92
GC content: 46.46
Gene sequence:
>480_bases ATGGAAAAATCATGGCAGGATGTGCTCGACAGGTTTCATTATGGGATTTACCTGATCACAGTTTCATCAAAAGAAGGATA TAACGGCATGATTGTCTCCTGGGTAACCCAATGTTCTCACGAACCGCCTCTCATTGCCGTGTCGATCAGGAAAAACCGTC TCTCTCATGAACAGATTCTGAAATCAGGGATATACTGCCTTAATGTCCTGCCGAAGGAATCCATCGCTGTAATCAAACAG TTCAAGATTGCAGACTGGAAGAAAAAATTCGATGCAGTCCGATACAACCCGTCGCAGAACGGTCTTCCCGTACTTGACGA CTGTATTGGATATCTGGACTGTACTCTGGAAAAGACAATAGATACGGGCGATCACACCCTCTTTGTCGGGAAAACCATCG GGGGAGCCGTCATTAACGGGGACAAAACGATGACCCTGTCCACACGGGACTATCAGGGCATATATCGGGGAACTCAATAA
Upstream 100 bases:
>100_bases ATTGAAGAAACTCCATCTCAAAATATAATGAATAGTCAGAGAGATACAACCGGTACTTAAAGCTTTATATGGAAACAACT TCTTAGAATCCGAGGCGATT
Downstream 100 bases:
>100_bases CCCCCTCTCATTCCGCACCAGGAAATTCATTTCAGGGTAAATCCACTTTTCCATGGATGATGCCGGATTACGCAGACGAT TGATGTTTTGTGCTTCCTTC
Product: NAD(P)H-flavin oxidoreductase
Products: NA
Alternate protein names: Nitric oxide reductase NADH:FprA oxidoreductase [H]
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MEKSWQDVLDRFHYGIYLITVSSKEGYNGMIVSWVTQCSHEPPLIAVSIRKNRLSHEQILKSGIYCLNVLPKESIAVIKQ FKIADWKKKFDAVRYNPSQNGLPVLDDCIGYLDCTLEKTIDTGDHTLFVGKTIGGAVINGDKTMTLSTRDYQGIYRGTQ
Sequences:
>Translated_159_residues MEKSWQDVLDRFHYGIYLITVSSKEGYNGMIVSWVTQCSHEPPLIAVSIRKNRLSHEQILKSGIYCLNVLPKESIAVIKQ FKIADWKKKFDAVRYNPSQNGLPVLDDCIGYLDCTLEKTIDTGDHTLFVGKTIGGAVINGDKTMTLSTRDYQGIYRGTQ >Mature_159_residues MEKSWQDVLDRFHYGIYLITVSSKEGYNGMIVSWVTQCSHEPPLIAVSIRKNRLSHEQILKSGIYCLNVLPKESIAVIKQ FKIADWKKKFDAVRYNPSQNGLPVLDDCIGYLDCTLEKTIDTGDHTLFVGKTIGGAVINGDKTMTLSTRDYQGIYRGTQ
Specific function: Has nitric oxide reductase activity in combination with FprA; probably involved in nitrosative stress protection. Acts as an NADH:FprA oxidoreductase [H]
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rubredoxin-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002563 - InterPro: IPR004039 - InterPro: IPR018527 - InterPro: IPR012349 - InterPro: IPR009002 [H]
Pfam domain/function: PF01613 Flavin_Reduct; PF00301 Rubredoxin [H]
EC number: NA
Molecular weight: Translated: 17963; Mature: 17963
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKSWQDVLDRFHYGIYLITVSSKEGYNGMIVSWVTQCSHEPPLIAVSIRKNRLSHEQIL CCCCHHHHHHHHCCEEEEEEEECCCCCCCEEEHHHHHCCCCCCEEEEEECCCCCCHHHHH KSGIYCLNVLPKESIAVIKQFKIADWKKKFDAVRYNPSQNGLPVLDDCIGYLDCTLEKTI HCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHCC DTGDHTLFVGKTIGGAVINGDKTMTLSTRDYQGIYRGTQ CCCCCEEEEECCCCCEEECCCEEEEEECCCCCCCCCCCC >Mature Secondary Structure MEKSWQDVLDRFHYGIYLITVSSKEGYNGMIVSWVTQCSHEPPLIAVSIRKNRLSHEQIL CCCCHHHHHHHHCCEEEEEEEECCCCCCCEEEHHHHHCCCCCCEEEEEECCCCCCHHHHH KSGIYCLNVLPKESIAVIKQFKIADWKKKFDAVRYNPSQNGLPVLDDCIGYLDCTLEKTI HCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHCC DTGDHTLFVGKTIGGAVINGDKTMTLSTRDYQGIYRGTQ CCCCCEEEEECCCCCEEECCCEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11160086; 12627946 [H]