| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859598
Identifier: 85859598
GI number: 85859598
Start: 1830434
End: 1830739
Strand: Direct
Name: 85859598
Synonym: SYN_02018
Alternate gene names: NA
Gene position: 1830434-1830739 (Clockwise)
Preceding gene: 85859597
Following gene: 85859599
Centisome position: 57.57
GC content: 47.39
Gene sequence:
>306_bases ATGCTCGTCCAGTTCAGTATCGTTCCTCTGGGTATCGGGGACAGCATCAGCAAAGACGTTGCAGAAATTATCCGTCTTGT TGATGAAAGCGGTCTGCCCTATCGAACAAACCCCATGGGAACCGTCATGGAAGGAGAATGGGAAGACGTGATGACCCTGA TCCGTAAGTGTCATGAGGAGGTATTGAGGAATGCATCGAGAGTACTGACTTCCATAACGATTGATGACCGGCCTGGAAAA CCTGACCGAATCATCGAGAAGATCAAATCTGTTGAGAAAAGGCTCGGTCGGGAAATAAAAAAATGA
Upstream 100 bases:
>100_bases GGTTCTTCGATCATCAGGGAATTTTAACAGCCCGTGGCCGTCTGCCTCGAATCGAAACACGCTGTAAATCAATTTTATCC CTGTCGAAAGGAGTCAAATC
Downstream 100 bases:
>100_bases TGGAGATCGGAACAGCCGCAATCCTCGCTTCCTGTCCCCGAAGATGGAAAACCACTGAATGCTCATTACCAAGCGTGGAA ATGTTGCAACTGTTTCACAC
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MLVQFSIVPLGIGDSISKDVAEIIRLVDESGLPYRTNPMGTVMEGEWEDVMTLIRKCHEEVLRNASRVLTSITIDDRPGK PDRIIEKIKSVEKRLGREIKK
Sequences:
>Translated_101_residues MLVQFSIVPLGIGDSISKDVAEIIRLVDESGLPYRTNPMGTVMEGEWEDVMTLIRKCHEEVLRNASRVLTSITIDDRPGK PDRIIEKIKSVEKRLGREIKK >Mature_101_residues MLVQFSIVPLGIGDSISKDVAEIIRLVDESGLPYRTNPMGTVMEGEWEDVMTLIRKCHEEVLRNASRVLTSITIDDRPGK PDRIIEKIKSVEKRLGREIKK
Specific function: Unknown
COG id: COG0011
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0045 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002767 - InterPro: IPR016198 [H]
Pfam domain/function: PF01910 DUF77 [H]
EC number: NA
Molecular weight: Translated: 11462; Mature: 11462
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVQFSIVPLGIGDSISKDVAEIIRLVDESGLPYRTNPMGTVMEGEWEDVMTLIRKCHEE CEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH VLRNASRVLTSITIDDRPGKPDRIIEKIKSVEKRLGREIKK HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLVQFSIVPLGIGDSISKDVAEIIRLVDESGLPYRTNPMGTVMEGEWEDVMTLIRKCHEE CEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH VLRNASRVLTSITIDDRPGKPDRIIEKIKSVEKRLGREIKK HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]