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The map label for this gene is hspC2 [H]

Identifier: 85859564

GI number: 85859564

Start: 1788346

End: 1788837

Strand: Direct

Name: hspC2 [H]

Synonym: SYN_01907

Alternate gene names: 85859564

Gene position: 1788346-1788837 (Clockwise)

Preceding gene: 85859563

Following gene: 85859565

Centisome position: 56.25

GC content: 56.5

Gene sequence:

>492_bases
ATGATTAGAAACCTGTTGCCCACCGTATGGCGGAGAAGCGAAACGCCCCTGCGACGCGCAGAGGAAAGCCCCTTCTTGGC
CCTGCATCGGGAAATGAACCGGATGTTCGACGACTTTTCCCGAGGCTTTGACTTGTCGCCCTTTGATGGCGGATGGAGTT
GGGGCTTTTCGCCCCCGGTCGACGTTCGGGAGGACGAAAAAGAGGTCACCGTGAAGGCCGAGCTGCCGGGCATGGAGGAG
AAGGACATTGAGGTGAATCTTGCCGACAATGGCCTCACGATCAAGGGGGAGAAGAAGGCCGAGAAGGAAGAGAAGGGGAA
GGACAATTGGTATCGGGAGACGAGCTACGGTGCCTTCCATAGGTTCATCCCGCTTCCCGAAGGACTCGACAAGGAGAAAG
TTGATGCTCGCTTCAAGAACGGCGTCTTGACCGTTACCCTTCGCCGGTTGGAAGAGGCCAAGGGGAAGAAGATCGCTATC
AAAGCGGAATAG

Upstream 100 bases:

>100_bases
GGCCGAATCTGTGATTATTTTACGCTCAAAAAAGGCATTAAACTTAACACTATCATAGTGTTGCAAACAAATATTCCGAA
AGGGAAAGGAGGAAAAGCAT

Downstream 100 bases:

>100_bases
CCGTGCTGACGGCGTCATTTGAATTAGTGAGTTCCCCCCGGCCATTGGGCGGGGGGAAACCCTTTTTGACCGAGCCTGAT
CCTCTCCGACCCGGAATTCA

Product: small heat shock protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MIRNLLPTVWRRSETPLRRAEESPFLALHREMNRMFDDFSRGFDLSPFDGGWSWGFSPPVDVREDEKEVTVKAELPGMEE
KDIEVNLADNGLTIKGEKKAEKEEKGKDNWYRETSYGAFHRFIPLPEGLDKEKVDARFKNGVLTVTLRRLEEAKGKKIAI
KAE

Sequences:

>Translated_163_residues
MIRNLLPTVWRRSETPLRRAEESPFLALHREMNRMFDDFSRGFDLSPFDGGWSWGFSPPVDVREDEKEVTVKAELPGMEE
KDIEVNLADNGLTIKGEKKAEKEEKGKDNWYRETSYGAFHRFIPLPEGLDKEKVDARFKNGVLTVTLRRLEEAKGKKIAI
KAE
>Mature_163_residues
MIRNLLPTVWRRSETPLRRAEESPFLALHREMNRMFDDFSRGFDLSPFDGGWSWGFSPPVDVREDEKEVTVKAELPGMEE
KDIEVNLADNGLTIKGEKKAEKEEKGKDNWYRETSYGAFHRFIPLPEGLDKEKVDARFKNGVLTVTLRRLEEAKGKKIAI
KAE

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6319546, Length=142, Percent_Identity=31.6901408450704, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 18855; Mature: 18855

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRNLLPTVWRRSETPLRRAEESPFLALHREMNRMFDDFSRGFDLSPFDGGWSWGFSPPV
CCCCHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
DVREDEKEVTVKAELPGMEEKDIEVNLADNGLTIKGEKKAEKEEKGKDNWYRETSYGAFH
CCCCCCCEEEEEECCCCCCCCCEEEEECCCCEEEECCCHHHHHHCCCCCCEECCCCCCHH
RFIPLPEGLDKEKVDARFKNGVLTVTLRRLEEAKGKKIAIKAE
HCCCCCCCCCHHHHHHHHHCCEEEEEHHHHHHCCCCEEEEEEC
>Mature Secondary Structure
MIRNLLPTVWRRSETPLRRAEESPFLALHREMNRMFDDFSRGFDLSPFDGGWSWGFSPPV
CCCCHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
DVREDEKEVTVKAELPGMEEKDIEVNLADNGLTIKGEKKAEKEEKGKDNWYRETSYGAFH
CCCCCCCEEEEEECCCCCCCCCEEEEECCCCEEEECCCHHHHHHCCCCCCEECCCCCCHH
RFIPLPEGLDKEKVDARFKNGVLTVTLRRLEEAKGKKIAIKAE
HCCCCCCCCCHHHHHHHHHCCEEEEEHHHHHHCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA