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The map label for this gene is fliP

Identifier: 85859180

GI number: 85859180

Start: 1357366

End: 1358154

Strand: Direct

Name: fliP

Synonym: SYN_02835

Alternate gene names: 85859180

Gene position: 1357366-1358154 (Clockwise)

Preceding gene: 85859179

Following gene: 85859181

Centisome position: 42.69

GC content: 46.64

Gene sequence:

>789_bases
ATGATGACTAGATACATCAATGATGCCCTGAAAGATATTGTTCCTGAAGTTTTACTGCTTGTTATCCTTTTCACTGTGTT
GGGGCCAGGGGTTGCTTCCGCGGAACCTTTATCTTTGCCGAACATCAGCTTGACTGTCGGTGGAAATGCGGATTCTCCGG
ACAAAGTGGCAACGGTCATTCAGCTTCTTTTCATCCTGACCGTGTTGTCACTGACACCGGCGATCCTGTTGATGCTTACC
TCATTTACCCGCATTGTGATCGTCCTTTCTCTGCTAAGGCAGGCCATGGGCACGCAGCAGATGCCTTCAAATCAGATTAT
CATCGGTTTGTCTCTGTTCCTGACCTTTTTTATTATGTCTCCCGTGTGGCAGAGCGTGCACAGTGAAGCGTTAAAACCTT
ATTATGATGAGGAAATATCAGGAGAACAGGCAATCGAAAGGGCCGTCATTCCCGTTAAAGCATTTATGCTGAAGCAGACT
CGAGAGAAGGACATTGCCCTGTTTCTGCAGATATCCAAAGGAAAAAGACCGGAGAAGCCAGCCGATCTGGCGCTTTCCGT
TCTGGTTCCCGCCTTTGTGATCAGTGAGCTTAAAACGGCATTCCAGATCGGATTTCTGTTGTTTTTGCCTTTTTTTATTA
TTGACATGGTGGTTGCCAGCGTTCTGCTTTCCATGGGGATGATGATGCTTCCCCCGATTATGATGAGTCTGCCTTTCAAG
CTGCTGTTATTCGTCCTGGTGGATGGATGGTATTTGATTATCGGATCGCTCGTTCAGAGTTTTCATTAG

Upstream 100 bases:

>100_bases
GAAAACTGCCGGTCGAATCGGAGATGCCTTCCGCTGCTTTTGCGGAACAGTTTTCCCGTTATAAGGAAAAAATAATGTCT
GCTATGGATAGCAAGATGAA

Downstream 100 bases:

>100_bases
AAAATTTTATAAGGAAAGAATTCATGACTCCTGATTTTGTTGTCGGTATCATGGCTGAAGCCATCAAAGTCACACTCTTA
GTGGCCGGTCCACTCCTGAT

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MMTRYINDALKDIVPEVLLLVILFTVLGPGVASAEPLSLPNISLTVGGNADSPDKVATVIQLLFILTVLSLTPAILLMLT
SFTRIVIVLSLLRQAMGTQQMPSNQIIIGLSLFLTFFIMSPVWQSVHSEALKPYYDEEISGEQAIERAVIPVKAFMLKQT
REKDIALFLQISKGKRPEKPADLALSVLVPAFVISELKTAFQIGFLLFLPFFIIDMVVASVLLSMGMMMLPPIMMSLPFK
LLLFVLVDGWYLIIGSLVQSFH

Sequences:

>Translated_262_residues
MMTRYINDALKDIVPEVLLLVILFTVLGPGVASAEPLSLPNISLTVGGNADSPDKVATVIQLLFILTVLSLTPAILLMLT
SFTRIVIVLSLLRQAMGTQQMPSNQIIIGLSLFLTFFIMSPVWQSVHSEALKPYYDEEISGEQAIERAVIPVKAFMLKQT
REKDIALFLQISKGKRPEKPADLALSVLVPAFVISELKTAFQIGFLLFLPFFIIDMVVASVLLSMGMMMLPPIMMSLPFK
LLLFVLVDGWYLIIGSLVQSFH
>Mature_262_residues
MMTRYINDALKDIVPEVLLLVILFTVLGPGVASAEPLSLPNISLTVGGNADSPDKVATVIQLLFILTVLSLTPAILLMLT
SFTRIVIVLSLLRQAMGTQQMPSNQIIIGLSLFLTFFIMSPVWQSVHSEALKPYYDEEISGEQAIERAVIPVKAFMLKQT
REKDIALFLQISKGKRPEKPADLALSVLVPAFVISELKTAFQIGFLLFLPFFIIDMVVASVLLSMGMMMLPPIMMSLPFK
LLLFVLVDGWYLIIGSLVQSFH

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=203, Percent_Identity=54.679802955665, Blast_Score=235, Evalue=3e-63,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 28970; Mature: 28970

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTRYINDALKDIVPEVLLLVILFTVLGPGVASAEPLSLPNISLTVGGNADSPDKVATVI
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHH
QLLFILTVLSLTPAILLMLTSFTRIVIVLSLLRQAMGTQQMPSNQIIIGLSLFLTFFIMS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHH
PVWQSVHSEALKPYYDEEISGEQAIERAVIPVKAFMLKQTREKDIALFLQISKGKRPEKP
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCH
ADLALSVLVPAFVISELKTAFQIGFLLFLPFFIIDMVVASVLLSMGMMMLPPIMMSLPFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLFVLVDGWYLIIGSLVQSFH
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMTRYINDALKDIVPEVLLLVILFTVLGPGVASAEPLSLPNISLTVGGNADSPDKVATVI
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHH
QLLFILTVLSLTPAILLMLTSFTRIVIVLSLLRQAMGTQQMPSNQIIIGLSLFLTFFIMS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHH
PVWQSVHSEALKPYYDEEISGEQAIERAVIPVKAFMLKQTREKDIALFLQISKGKRPEKP
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCH
ADLALSVLVPAFVISELKTAFQIGFLLFLPFFIIDMVVASVLLSMGMMMLPPIMMSLPFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLFVLVDGWYLIIGSLVQSFH
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597417; 9384377 [H]