| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859173
Identifier: 85859173
GI number: 85859173
Start: 1350677
End: 1352431
Strand: Direct
Name: 85859173
Synonym: SYN_02841
Alternate gene names: NA
Gene position: 1350677-1352431 (Clockwise)
Preceding gene: 85859172
Following gene: 85859174
Centisome position: 42.48
GC content: 47.98
Gene sequence:
>1755_bases TTGAGGGGGAATATGGACGCAATCGCAACCGGCATTGAAAGTGCTGTTGAACTGATACAGGCTGCGCAGCCGATCATGAC GGCCGGATCGAAAACCTCGGGCGTCGTTGGAAAGAGTATGACGACAGAAAAAGATCCGGTTGAAGGGCCAACGGATGCGG CATCGTTTTGTGTTTGTCTGAAAGAATCTGTGGAGCAGAAAACTTTACGGGAAAACGGGATTGATCAGGATCTGGAAAGG GAACATGTCAAATCGACTGAAGGGGAGAAGATCGGATGGATGATAAAATCTGTAAACGATCCTGTGTTCCCGGAGGCTTG CTGCCATGGAAACGGGTTTCCGGCAATTCCGAACGATCTGGGCTCTGATCCTGAGAAAAACGGGGCAAACAGAGAAACAT CCGACATGACGACCAGTATTTCCGGGAAAAATTCCCTTCCCTATAGCGGGAATGATGGTGCTTTGCTGTTCGGGAATGAA AGCGGGACCGGTTTATACTCTGCTTCAAAGAATATGGATGTGCCGCTTGAGGGGGAAACAGTACAGGCGTTGAATGATAA GGCGTTCATCCGGAAATTCGATCTTGCGGCATTGAAAGGTATGCATCATCAGAAAGAAGTTATCAGCAACATGACAGAAG GGGAAATGGCAAGTGCCGATTCCGGCGTCGGGAACCTTCCTCCTGCAAGGGACATCAAAACAAGCCAAGGACAGGCCATT CCCGGGCAAAATGCTTTAAAATCAAGCGATTCTTTCTCTCTCCCTCAAAAATTGACTTCTCAAGAAAATCGTAAAAATAT TGAAGGAAGCGGATCCTCGAAGTCTCCGGTAATATCGGGAGAAACCTTTCAAACAACAAAAAAAGAAGCGTCATTACATT CCCGCGCGCTTCAGACCCCCCTGTCGAACGGACTCAGATCTACAGAGTCTCCAGTAAAATCGGGAGAAACCCTTCAAAAA ACAGAGATTGATGCGCCGTTAACTTCCCGCGTACTTCAGCCACACAATCTGAATGGGCAAGCTTCTCCAGAAAATGATTC ATACCAGCCAACAGGGATTGAACCGATCAAAAGAGATTATTATGTTCTCGATGATAAGCAGAGTCCGAGCATGGTTATTC GGGAAAATCTTTTGGACAGCTCTTCCGTGCGAAAAGAAGAGGGGAACGGAAGTCAGGGGAAGAGATTCAGCCAGGGGTTG AAAGAGGTTTTCGAACGTTCGAATTCAGAACAACCAGGGTCCGCATTTTTTTCTGCGGAAAACAAAATTTCCATTGAAAA ATCCTGGGAGTCCCGGCTTGTTCGGCCACAGGCCATGATGGATCAGGTTGTCGAAGGCGGGATCGAGATGGTCCGGAAAG GCGGCGGCCGGCTTAGAATGACCCTGAATCCTCCGAATCTGGGATCTCTGGACATGGATATCCAGGTCAGAAACAATAAG GTGGAGGTGTTGTTTTTAGTTGATACGGCAGAAATACAGTCGTCGCTGCAGGCGAACGCGGATCTTCTCAAAACGGCACT GAGTCAGCAGGGTTTGAAAGTCGATGGTTACAATGTCCTGATCCAGGGCAATACGGATCATCACAGTGCGTATTATTCCG ATGATAACGCATCATGGCTGAATTCAAGGCGGGAAGGCGGCAAGGATGAGAACAGAAAAGATCAGCAGGAACAGGCTGAT GGCATAATGGATCTGCTCAAGGGATCGAGGTTTTATCCGGGTGATCGTTATAACCGAATAAGCCTGTTTATTTAG
Upstream 100 bases:
>100_bases TGACGGGTATTCTGTCTGCTGTCAAGTGCGAGTATTTATTGAATAAAATAAAATTTATTCATGGCATGTTCTCTGCAATT TCCCATTCGGACAAGAATAG
Downstream 100 bases:
>100_bases GAGGTGTCAGGAGATGTGGGGCGTGACGAATATAGGCAAGGCGGCCAGCGCAGGTTCAGAAGGAACATCAACGAATAAAT TAACGGGAAAAGATGAATTT
Product: flagellar hook-length control protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 584; Mature: 584
Protein sequence:
>584_residues MRGNMDAIATGIESAVELIQAAQPIMTAGSKTSGVVGKSMTTEKDPVEGPTDAASFCVCLKESVEQKTLRENGIDQDLER EHVKSTEGEKIGWMIKSVNDPVFPEACCHGNGFPAIPNDLGSDPEKNGANRETSDMTTSISGKNSLPYSGNDGALLFGNE SGTGLYSASKNMDVPLEGETVQALNDKAFIRKFDLAALKGMHHQKEVISNMTEGEMASADSGVGNLPPARDIKTSQGQAI PGQNALKSSDSFSLPQKLTSQENRKNIEGSGSSKSPVISGETFQTTKKEASLHSRALQTPLSNGLRSTESPVKSGETLQK TEIDAPLTSRVLQPHNLNGQASPENDSYQPTGIEPIKRDYYVLDDKQSPSMVIRENLLDSSSVRKEEGNGSQGKRFSQGL KEVFERSNSEQPGSAFFSAENKISIEKSWESRLVRPQAMMDQVVEGGIEMVRKGGGRLRMTLNPPNLGSLDMDIQVRNNK VEVLFLVDTAEIQSSLQANADLLKTALSQQGLKVDGYNVLIQGNTDHHSAYYSDDNASWLNSRREGGKDENRKDQQEQAD GIMDLLKGSRFYPGDRYNRISLFI
Sequences:
>Translated_584_residues MRGNMDAIATGIESAVELIQAAQPIMTAGSKTSGVVGKSMTTEKDPVEGPTDAASFCVCLKESVEQKTLRENGIDQDLER EHVKSTEGEKIGWMIKSVNDPVFPEACCHGNGFPAIPNDLGSDPEKNGANRETSDMTTSISGKNSLPYSGNDGALLFGNE SGTGLYSASKNMDVPLEGETVQALNDKAFIRKFDLAALKGMHHQKEVISNMTEGEMASADSGVGNLPPARDIKTSQGQAI PGQNALKSSDSFSLPQKLTSQENRKNIEGSGSSKSPVISGETFQTTKKEASLHSRALQTPLSNGLRSTESPVKSGETLQK TEIDAPLTSRVLQPHNLNGQASPENDSYQPTGIEPIKRDYYVLDDKQSPSMVIRENLLDSSSVRKEEGNGSQGKRFSQGL KEVFERSNSEQPGSAFFSAENKISIEKSWESRLVRPQAMMDQVVEGGIEMVRKGGGRLRMTLNPPNLGSLDMDIQVRNNK VEVLFLVDTAEIQSSLQANADLLKTALSQQGLKVDGYNVLIQGNTDHHSAYYSDDNASWLNSRREGGKDENRKDQQEQAD GIMDLLKGSRFYPGDRYNRISLFI >Mature_584_residues MRGNMDAIATGIESAVELIQAAQPIMTAGSKTSGVVGKSMTTEKDPVEGPTDAASFCVCLKESVEQKTLRENGIDQDLER EHVKSTEGEKIGWMIKSVNDPVFPEACCHGNGFPAIPNDLGSDPEKNGANRETSDMTTSISGKNSLPYSGNDGALLFGNE SGTGLYSASKNMDVPLEGETVQALNDKAFIRKFDLAALKGMHHQKEVISNMTEGEMASADSGVGNLPPARDIKTSQGQAI PGQNALKSSDSFSLPQKLTSQENRKNIEGSGSSKSPVISGETFQTTKKEASLHSRALQTPLSNGLRSTESPVKSGETLQK TEIDAPLTSRVLQPHNLNGQASPENDSYQPTGIEPIKRDYYVLDDKQSPSMVIRENLLDSSSVRKEEGNGSQGKRFSQGL KEVFERSNSEQPGSAFFSAENKISIEKSWESRLVRPQAMMDQVVEGGIEMVRKGGGRLRMTLNPPNLGSLDMDIQVRNNK VEVLFLVDTAEIQSSLQANADLLKTALSQQGLKVDGYNVLIQGNTDHHSAYYSDDNASWLNSRREGGKDENRKDQQEQAD GIMDLLKGSRFYPGDRYNRISLFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63503; Mature: 63503
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGNMDAIATGIESAVELIQAAQPIMTAGSKTSGVVGKSMTTEKDPVEGPTDAASFCVCL CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH KESVEQKTLRENGIDQDLEREHVKSTEGEKIGWMIKSVNDPVFPEACCHGNGFPAIPNDL HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHEEECCCCCCCCHHHHCCCCCCCCCHHC GSDPEKNGANRETSDMTTSISGKNSLPYSGNDGALLFGNESGTGLYSASKNMDVPLEGET CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCH VQALNDKAFIRKFDLAALKGMHHQKEVISNMTEGEMASADSGVGNLPPARDIKTSQGQAI HHHHCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCC PGQNALKSSDSFSLPQKLTSQENRKNIEGSGSSKSPVISGETFQTTKKEASLHSRALQTP CCCHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHH LSNGLRSTESPVKSGETLQKTEIDAPLTSRVLQPHNLNGQASPENDSYQPTGIEPIKRDY HHHCCCCCCCHHHCCCCHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCE YVLDDKQSPSMVIRENLLDSSSVRKEEGNGSQGKRFSQGLKEVFERSNSEQPGSAFFSAE EEECCCCCCHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCC NKISIEKSWESRLVRPQAMMDQVVEGGIEMVRKGGGRLRMTLNPPNLGSLDMDIQVRNNK CCEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCE VEVLFLVDTAEIQSSLQANADLLKTALSQQGLKVDGYNVLIQGNTDHHSAYYSDDNASWL EEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEEEECCCCCCCCEECCCCHHHH NSRREGGKDENRKDQQEQADGIMDLLKGSRFYPGDRYNRISLFI HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEC >Mature Secondary Structure MRGNMDAIATGIESAVELIQAAQPIMTAGSKTSGVVGKSMTTEKDPVEGPTDAASFCVCL CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH KESVEQKTLRENGIDQDLEREHVKSTEGEKIGWMIKSVNDPVFPEACCHGNGFPAIPNDL HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHEEECCCCCCCCHHHHCCCCCCCCCHHC GSDPEKNGANRETSDMTTSISGKNSLPYSGNDGALLFGNESGTGLYSASKNMDVPLEGET CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCH VQALNDKAFIRKFDLAALKGMHHQKEVISNMTEGEMASADSGVGNLPPARDIKTSQGQAI HHHHCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCC PGQNALKSSDSFSLPQKLTSQENRKNIEGSGSSKSPVISGETFQTTKKEASLHSRALQTP CCCHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHH LSNGLRSTESPVKSGETLQKTEIDAPLTSRVLQPHNLNGQASPENDSYQPTGIEPIKRDY HHHCCCCCCCHHHCCCCHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCE YVLDDKQSPSMVIRENLLDSSSVRKEEGNGSQGKRFSQGLKEVFERSNSEQPGSAFFSAE EEECCCCCCHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCC NKISIEKSWESRLVRPQAMMDQVVEGGIEMVRKGGGRLRMTLNPPNLGSLDMDIQVRNNK CCEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCE VEVLFLVDTAEIQSSLQANADLLKTALSQQGLKVDGYNVLIQGNTDHHSAYYSDDNASWL EEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEEEECCCCCCCCEECCCCHHHH NSRREGGKDENRKDQQEQADGIMDLLKGSRFYPGDRYNRISLFI HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA