Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85859173

Identifier: 85859173

GI number: 85859173

Start: 1350677

End: 1352431

Strand: Direct

Name: 85859173

Synonym: SYN_02841

Alternate gene names: NA

Gene position: 1350677-1352431 (Clockwise)

Preceding gene: 85859172

Following gene: 85859174

Centisome position: 42.48

GC content: 47.98

Gene sequence:

>1755_bases
TTGAGGGGGAATATGGACGCAATCGCAACCGGCATTGAAAGTGCTGTTGAACTGATACAGGCTGCGCAGCCGATCATGAC
GGCCGGATCGAAAACCTCGGGCGTCGTTGGAAAGAGTATGACGACAGAAAAAGATCCGGTTGAAGGGCCAACGGATGCGG
CATCGTTTTGTGTTTGTCTGAAAGAATCTGTGGAGCAGAAAACTTTACGGGAAAACGGGATTGATCAGGATCTGGAAAGG
GAACATGTCAAATCGACTGAAGGGGAGAAGATCGGATGGATGATAAAATCTGTAAACGATCCTGTGTTCCCGGAGGCTTG
CTGCCATGGAAACGGGTTTCCGGCAATTCCGAACGATCTGGGCTCTGATCCTGAGAAAAACGGGGCAAACAGAGAAACAT
CCGACATGACGACCAGTATTTCCGGGAAAAATTCCCTTCCCTATAGCGGGAATGATGGTGCTTTGCTGTTCGGGAATGAA
AGCGGGACCGGTTTATACTCTGCTTCAAAGAATATGGATGTGCCGCTTGAGGGGGAAACAGTACAGGCGTTGAATGATAA
GGCGTTCATCCGGAAATTCGATCTTGCGGCATTGAAAGGTATGCATCATCAGAAAGAAGTTATCAGCAACATGACAGAAG
GGGAAATGGCAAGTGCCGATTCCGGCGTCGGGAACCTTCCTCCTGCAAGGGACATCAAAACAAGCCAAGGACAGGCCATT
CCCGGGCAAAATGCTTTAAAATCAAGCGATTCTTTCTCTCTCCCTCAAAAATTGACTTCTCAAGAAAATCGTAAAAATAT
TGAAGGAAGCGGATCCTCGAAGTCTCCGGTAATATCGGGAGAAACCTTTCAAACAACAAAAAAAGAAGCGTCATTACATT
CCCGCGCGCTTCAGACCCCCCTGTCGAACGGACTCAGATCTACAGAGTCTCCAGTAAAATCGGGAGAAACCCTTCAAAAA
ACAGAGATTGATGCGCCGTTAACTTCCCGCGTACTTCAGCCACACAATCTGAATGGGCAAGCTTCTCCAGAAAATGATTC
ATACCAGCCAACAGGGATTGAACCGATCAAAAGAGATTATTATGTTCTCGATGATAAGCAGAGTCCGAGCATGGTTATTC
GGGAAAATCTTTTGGACAGCTCTTCCGTGCGAAAAGAAGAGGGGAACGGAAGTCAGGGGAAGAGATTCAGCCAGGGGTTG
AAAGAGGTTTTCGAACGTTCGAATTCAGAACAACCAGGGTCCGCATTTTTTTCTGCGGAAAACAAAATTTCCATTGAAAA
ATCCTGGGAGTCCCGGCTTGTTCGGCCACAGGCCATGATGGATCAGGTTGTCGAAGGCGGGATCGAGATGGTCCGGAAAG
GCGGCGGCCGGCTTAGAATGACCCTGAATCCTCCGAATCTGGGATCTCTGGACATGGATATCCAGGTCAGAAACAATAAG
GTGGAGGTGTTGTTTTTAGTTGATACGGCAGAAATACAGTCGTCGCTGCAGGCGAACGCGGATCTTCTCAAAACGGCACT
GAGTCAGCAGGGTTTGAAAGTCGATGGTTACAATGTCCTGATCCAGGGCAATACGGATCATCACAGTGCGTATTATTCCG
ATGATAACGCATCATGGCTGAATTCAAGGCGGGAAGGCGGCAAGGATGAGAACAGAAAAGATCAGCAGGAACAGGCTGAT
GGCATAATGGATCTGCTCAAGGGATCGAGGTTTTATCCGGGTGATCGTTATAACCGAATAAGCCTGTTTATTTAG

Upstream 100 bases:

>100_bases
TGACGGGTATTCTGTCTGCTGTCAAGTGCGAGTATTTATTGAATAAAATAAAATTTATTCATGGCATGTTCTCTGCAATT
TCCCATTCGGACAAGAATAG

Downstream 100 bases:

>100_bases
GAGGTGTCAGGAGATGTGGGGCGTGACGAATATAGGCAAGGCGGCCAGCGCAGGTTCAGAAGGAACATCAACGAATAAAT
TAACGGGAAAAGATGAATTT

Product: flagellar hook-length control protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 584; Mature: 584

Protein sequence:

>584_residues
MRGNMDAIATGIESAVELIQAAQPIMTAGSKTSGVVGKSMTTEKDPVEGPTDAASFCVCLKESVEQKTLRENGIDQDLER
EHVKSTEGEKIGWMIKSVNDPVFPEACCHGNGFPAIPNDLGSDPEKNGANRETSDMTTSISGKNSLPYSGNDGALLFGNE
SGTGLYSASKNMDVPLEGETVQALNDKAFIRKFDLAALKGMHHQKEVISNMTEGEMASADSGVGNLPPARDIKTSQGQAI
PGQNALKSSDSFSLPQKLTSQENRKNIEGSGSSKSPVISGETFQTTKKEASLHSRALQTPLSNGLRSTESPVKSGETLQK
TEIDAPLTSRVLQPHNLNGQASPENDSYQPTGIEPIKRDYYVLDDKQSPSMVIRENLLDSSSVRKEEGNGSQGKRFSQGL
KEVFERSNSEQPGSAFFSAENKISIEKSWESRLVRPQAMMDQVVEGGIEMVRKGGGRLRMTLNPPNLGSLDMDIQVRNNK
VEVLFLVDTAEIQSSLQANADLLKTALSQQGLKVDGYNVLIQGNTDHHSAYYSDDNASWLNSRREGGKDENRKDQQEQAD
GIMDLLKGSRFYPGDRYNRISLFI

Sequences:

>Translated_584_residues
MRGNMDAIATGIESAVELIQAAQPIMTAGSKTSGVVGKSMTTEKDPVEGPTDAASFCVCLKESVEQKTLRENGIDQDLER
EHVKSTEGEKIGWMIKSVNDPVFPEACCHGNGFPAIPNDLGSDPEKNGANRETSDMTTSISGKNSLPYSGNDGALLFGNE
SGTGLYSASKNMDVPLEGETVQALNDKAFIRKFDLAALKGMHHQKEVISNMTEGEMASADSGVGNLPPARDIKTSQGQAI
PGQNALKSSDSFSLPQKLTSQENRKNIEGSGSSKSPVISGETFQTTKKEASLHSRALQTPLSNGLRSTESPVKSGETLQK
TEIDAPLTSRVLQPHNLNGQASPENDSYQPTGIEPIKRDYYVLDDKQSPSMVIRENLLDSSSVRKEEGNGSQGKRFSQGL
KEVFERSNSEQPGSAFFSAENKISIEKSWESRLVRPQAMMDQVVEGGIEMVRKGGGRLRMTLNPPNLGSLDMDIQVRNNK
VEVLFLVDTAEIQSSLQANADLLKTALSQQGLKVDGYNVLIQGNTDHHSAYYSDDNASWLNSRREGGKDENRKDQQEQAD
GIMDLLKGSRFYPGDRYNRISLFI
>Mature_584_residues
MRGNMDAIATGIESAVELIQAAQPIMTAGSKTSGVVGKSMTTEKDPVEGPTDAASFCVCLKESVEQKTLRENGIDQDLER
EHVKSTEGEKIGWMIKSVNDPVFPEACCHGNGFPAIPNDLGSDPEKNGANRETSDMTTSISGKNSLPYSGNDGALLFGNE
SGTGLYSASKNMDVPLEGETVQALNDKAFIRKFDLAALKGMHHQKEVISNMTEGEMASADSGVGNLPPARDIKTSQGQAI
PGQNALKSSDSFSLPQKLTSQENRKNIEGSGSSKSPVISGETFQTTKKEASLHSRALQTPLSNGLRSTESPVKSGETLQK
TEIDAPLTSRVLQPHNLNGQASPENDSYQPTGIEPIKRDYYVLDDKQSPSMVIRENLLDSSSVRKEEGNGSQGKRFSQGL
KEVFERSNSEQPGSAFFSAENKISIEKSWESRLVRPQAMMDQVVEGGIEMVRKGGGRLRMTLNPPNLGSLDMDIQVRNNK
VEVLFLVDTAEIQSSLQANADLLKTALSQQGLKVDGYNVLIQGNTDHHSAYYSDDNASWLNSRREGGKDENRKDQQEQAD
GIMDLLKGSRFYPGDRYNRISLFI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63503; Mature: 63503

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGNMDAIATGIESAVELIQAAQPIMTAGSKTSGVVGKSMTTEKDPVEGPTDAASFCVCL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
KESVEQKTLRENGIDQDLEREHVKSTEGEKIGWMIKSVNDPVFPEACCHGNGFPAIPNDL
HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHEEECCCCCCCCHHHHCCCCCCCCCHHC
GSDPEKNGANRETSDMTTSISGKNSLPYSGNDGALLFGNESGTGLYSASKNMDVPLEGET
CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCH
VQALNDKAFIRKFDLAALKGMHHQKEVISNMTEGEMASADSGVGNLPPARDIKTSQGQAI
HHHHCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCC
PGQNALKSSDSFSLPQKLTSQENRKNIEGSGSSKSPVISGETFQTTKKEASLHSRALQTP
CCCHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHH
LSNGLRSTESPVKSGETLQKTEIDAPLTSRVLQPHNLNGQASPENDSYQPTGIEPIKRDY
HHHCCCCCCCHHHCCCCHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
YVLDDKQSPSMVIRENLLDSSSVRKEEGNGSQGKRFSQGLKEVFERSNSEQPGSAFFSAE
EEECCCCCCHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCC
NKISIEKSWESRLVRPQAMMDQVVEGGIEMVRKGGGRLRMTLNPPNLGSLDMDIQVRNNK
CCEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCE
VEVLFLVDTAEIQSSLQANADLLKTALSQQGLKVDGYNVLIQGNTDHHSAYYSDDNASWL
EEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEEEECCCCCCCCEECCCCHHHH
NSRREGGKDENRKDQQEQADGIMDLLKGSRFYPGDRYNRISLFI
HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEC
>Mature Secondary Structure
MRGNMDAIATGIESAVELIQAAQPIMTAGSKTSGVVGKSMTTEKDPVEGPTDAASFCVCL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
KESVEQKTLRENGIDQDLEREHVKSTEGEKIGWMIKSVNDPVFPEACCHGNGFPAIPNDL
HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHEEECCCCCCCCHHHHCCCCCCCCCHHC
GSDPEKNGANRETSDMTTSISGKNSLPYSGNDGALLFGNESGTGLYSASKNMDVPLEGET
CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCH
VQALNDKAFIRKFDLAALKGMHHQKEVISNMTEGEMASADSGVGNLPPARDIKTSQGQAI
HHHHCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCC
PGQNALKSSDSFSLPQKLTSQENRKNIEGSGSSKSPVISGETFQTTKKEASLHSRALQTP
CCCHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHH
LSNGLRSTESPVKSGETLQKTEIDAPLTSRVLQPHNLNGQASPENDSYQPTGIEPIKRDY
HHHCCCCCCCHHHCCCCHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
YVLDDKQSPSMVIRENLLDSSSVRKEEGNGSQGKRFSQGLKEVFERSNSEQPGSAFFSAE
EEECCCCCCHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCC
NKISIEKSWESRLVRPQAMMDQVVEGGIEMVRKGGGRLRMTLNPPNLGSLDMDIQVRNNK
CCEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCE
VEVLFLVDTAEIQSSLQANADLLKTALSQQGLKVDGYNVLIQGNTDHHSAYYSDDNASWL
EEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEEEECCCCCCCCEECCCCHHHH
NSRREGGKDENRKDQQEQADGIMDLLKGSRFYPGDRYNRISLFI
HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA