| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859125
Identifier: 85859125
GI number: 85859125
Start: 1303027
End: 1304421
Strand: Direct
Name: 85859125
Synonym: SYN_01506
Alternate gene names: NA
Gene position: 1303027-1304421 (Clockwise)
Preceding gene: 85859124
Following gene: 85859145
Centisome position: 40.98
GC content: 50.82
Gene sequence:
>1395_bases TTGTTGTTAACCGGTATAGTTATTGTGTATCGACATGAAATAACCGATATGGCGGTTAATATGATCGAATCAGGAAAAAT AATTGAAATATTAAATAAGTACAATTCATACTGGTCAACGGGGACGATATCATGCGGGATTCGCCGCGATATGCTGGATT CCTGCACACGGCAACTGGACGCAAAGGAGATCCTGCTGCTGAAGGGCATCCGTCGCAGCGGAAAGTCAACCCTCATGGCC CAGATGATCGGCGCTCTTCTGGAAGCGGGGATTCGACCGGTGCAGATTCTGCGGGTTAACCTCGAAGAGCCGCTTTTTTC CACGGATGCTTCTCTTGATTTTCTGGAGCGAATATACAGACTTTATCGAGACCGAATCTGTCCCGCGGGGCGCTGCTACC TGTTTCTTGACGAAATTCAGAATATCCCGGAGTGGGAGCGCTGGGTTCGGGGGCGTAACGAGACCGAGGACATAAAGATT GTCCTGACCGGCTCTTCTTCGGAACTGCTCAGCAGAGAAACAGGCACAAAGCTGACGGGTCGTCACCTGTCGTTTACGGT TTTTCCCCTGTCCTTTCAGGAATTCCTCCGTTTTAGAAATATCATGATCACTTCCCGGGAAGATTATTATGCCAACAAGC CTCTGGTGCGTCATCTTTTCTCCGAATATCTCCGTTACGGGGGATTTCCGGAAGTTGTCCTGAAGGAGGCGGTGGAAGAC AAGGAGCTCCTGCTGTGGCAGTACTTCGAGGACATCGTCTATCGGGATATCGTATCGAAATACGGGATACGGGATGCCGT GACGCTCAGAAATCTGGCCGTATACCTGATGACGAACATCGGGCGCCTGACGAGTATTTCCAATCTCAAGAAGACCTTCG GCGTTTCCCAGGATAAAATCGAGAATTACGCGGCGGCTCTTCTTGAAACCTGTCTTGCCCATCGGGTGTCGAAATTTTCC TGGTCCCTGAAGCGCAGCCTCCGGGAACGTTTCAATATCTACGCTGTCGACACGGGACTTCGCAACCGGGTTGCCTTTTC TTTCTCCGAGGATTCCGGCTGGCTGGTGGAGAATGTTGTACTGAATTTTTTGAAGAGTCAATTTGAAGAAATTTATTTCG AAAGCAACGGCGGCGAGATTGATTTCGTCATCAAGGAAGGTGTGGACCTGACGCATCGCCTTCAGGTCTGGTACGCCGAT CCAGCCGATACGGATATCCCGGAGAGAGAACTTCGGTGCTGGACCGGCTCGAAGACCTCGCATGAGGAAGCCCGGCCGTC GCGGACAGAACGGATCCGGAATATCCTGATCACCAACGATCTCGAAAAGGAACTGGTGCTGGGTGAGACGAAAGTTGAGT GTCTGCCCGTAATCCTTTTTCTTCTGGGCAAATAG
Upstream 100 bases:
>100_bases GTCGCCTCTTTACCGGCATTGAATAAAGAAGGAAAACGCCCTGTTTTCTTAATGAAAAAAATGAGCGCTGTCCCTGTTTA TTTCTGTTTATTTTGTTTAT
Downstream 100 bases:
>100_bases GGGCGGCGCCTGCATAGTATGGGCGCTGTCCCTCTTTTTCTCCTGCCTGGCGGGAGACCACAATTCCGACCACGGGGAAC TGTCGGAGAGATTTTTCAAT
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MLLTGIVIVYRHEITDMAVNMIESGKIIEILNKYNSYWSTGTISCGIRRDMLDSCTRQLDAKEILLLKGIRRSGKSTLMA QMIGALLEAGIRPVQILRVNLEEPLFSTDASLDFLERIYRLYRDRICPAGRCYLFLDEIQNIPEWERWVRGRNETEDIKI VLTGSSSELLSRETGTKLTGRHLSFTVFPLSFQEFLRFRNIMITSREDYYANKPLVRHLFSEYLRYGGFPEVVLKEAVED KELLLWQYFEDIVYRDIVSKYGIRDAVTLRNLAVYLMTNIGRLTSISNLKKTFGVSQDKIENYAAALLETCLAHRVSKFS WSLKRSLRERFNIYAVDTGLRNRVAFSFSEDSGWLVENVVLNFLKSQFEEIYFESNGGEIDFVIKEGVDLTHRLQVWYAD PADTDIPERELRCWTGSKTSHEEARPSRTERIRNILITNDLEKELVLGETKVECLPVILFLLGK
Sequences:
>Translated_464_residues MLLTGIVIVYRHEITDMAVNMIESGKIIEILNKYNSYWSTGTISCGIRRDMLDSCTRQLDAKEILLLKGIRRSGKSTLMA QMIGALLEAGIRPVQILRVNLEEPLFSTDASLDFLERIYRLYRDRICPAGRCYLFLDEIQNIPEWERWVRGRNETEDIKI VLTGSSSELLSRETGTKLTGRHLSFTVFPLSFQEFLRFRNIMITSREDYYANKPLVRHLFSEYLRYGGFPEVVLKEAVED KELLLWQYFEDIVYRDIVSKYGIRDAVTLRNLAVYLMTNIGRLTSISNLKKTFGVSQDKIENYAAALLETCLAHRVSKFS WSLKRSLRERFNIYAVDTGLRNRVAFSFSEDSGWLVENVVLNFLKSQFEEIYFESNGGEIDFVIKEGVDLTHRLQVWYAD PADTDIPERELRCWTGSKTSHEEARPSRTERIRNILITNDLEKELVLGETKVECLPVILFLLGK >Mature_464_residues MLLTGIVIVYRHEITDMAVNMIESGKIIEILNKYNSYWSTGTISCGIRRDMLDSCTRQLDAKEILLLKGIRRSGKSTLMA QMIGALLEAGIRPVQILRVNLEEPLFSTDASLDFLERIYRLYRDRICPAGRCYLFLDEIQNIPEWERWVRGRNETEDIKI VLTGSSSELLSRETGTKLTGRHLSFTVFPLSFQEFLRFRNIMITSREDYYANKPLVRHLFSEYLRYGGFPEVVLKEAVED KELLLWQYFEDIVYRDIVSKYGIRDAVTLRNLAVYLMTNIGRLTSISNLKKTFGVSQDKIENYAAALLETCLAHRVSKFS WSLKRSLRERFNIYAVDTGLRNRVAFSFSEDSGWLVENVVLNFLKSQFEEIYFESNGGEIDFVIKEGVDLTHRLQVWYAD PADTDIPERELRCWTGSKTSHEEARPSRTERIRNILITNDLEKELVLGETKVECLPVILFLLGK
Specific function: Unknown
COG id: COG1373
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1544 and MJ1637 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53791; Mature: 53791
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLTGIVIVYRHEITDMAVNMIESGKIIEILNKYNSYWSTGTISCGIRRDMLDSCTRQLD CCCHHEEEEHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHCC AKEILLLKGIRRSGKSTLMAQMIGALLEAGIRPVQILRVNLEEPLFSTDASLDFLERIYR HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHH LYRDRICPAGRCYLFLDEIQNIPEWERWVRGRNETEDIKIVLTGSSSELLSRETGTKLTG HHHHCCCCCCCCEEEEHHHCCCCCHHHHHCCCCCCCCEEEEEECCCHHHHHHHCCCCCCC RHLSFTVFPLSFQEFLRFRNIMITSREDYYANKPLVRHLFSEYLRYGGFPEVVLKEAVED CCEEEEEECCCHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCH KELLLWQYFEDIVYRDIVSKYGIRDAVTLRNLAVYLMTNIGRLTSISNLKKTFGVSQDKI HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHH ENYAAALLETCLAHRVSKFSWSLKRSLRERFNIYAVDTGLRNRVAFSFSEDSGWLVENVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEECCCCCHHHHHHH LNFLKSQFEEIYFESNGGEIDFVIKEGVDLTHRLQVWYADPADTDIPERELRCWTGSKTS HHHHHHHHHHEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCHHHHEEECCCCCC HEEARPSRTERIRNILITNDLEKELVLGETKVECLPVILFLLGK CHHCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MLLTGIVIVYRHEITDMAVNMIESGKIIEILNKYNSYWSTGTISCGIRRDMLDSCTRQLD CCCHHEEEEHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHCC AKEILLLKGIRRSGKSTLMAQMIGALLEAGIRPVQILRVNLEEPLFSTDASLDFLERIYR HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHH LYRDRICPAGRCYLFLDEIQNIPEWERWVRGRNETEDIKIVLTGSSSELLSRETGTKLTG HHHHCCCCCCCCEEEEHHHCCCCCHHHHHCCCCCCCCEEEEEECCCHHHHHHHCCCCCCC RHLSFTVFPLSFQEFLRFRNIMITSREDYYANKPLVRHLFSEYLRYGGFPEVVLKEAVED CCEEEEEECCCHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCH KELLLWQYFEDIVYRDIVSKYGIRDAVTLRNLAVYLMTNIGRLTSISNLKKTFGVSQDKI HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHH ENYAAALLETCLAHRVSKFSWSLKRSLRERFNIYAVDTGLRNRVAFSFSEDSGWLVENVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEECCCCCHHHHHHH LNFLKSQFEEIYFESNGGEIDFVIKEGVDLTHRLQVWYADPADTDIPERELRCWTGSKTS HHHHHHHHHHEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCHHHHEEECCCCCC HEEARPSRTERIRNILITNDLEKELVLGETKVECLPVILFLLGK CHHCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]