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The map label for this gene is panD

Identifier: 85859081

GI number: 85859081

Start: 1256407

End: 1256757

Strand: Direct

Name: panD

Synonym: SYN_00419

Alternate gene names: 85859081

Gene position: 1256407-1256757 (Clockwise)

Preceding gene: 85859080

Following gene: 85859082

Centisome position: 39.52

GC content: 49.0

Gene sequence:

>351_bases
ATGCAAAGGTTGATGCTTAAATCCAAAATTCACAGAGCGACCGTAACGGACGCAGATCTTCATTATGAGGGCAGTATTTC
CATTGATGAAGCGTTGATGGAGGCTGCGGATCTTCTGCCCTATGAAAAGGTTGCTATCTATGATGTCAACAATGGCGAGC
GATTTACAACTTACGTAATCACGGGCAAGCGGGGCTCTGGGGTTATCTGCCTTAACGGTGCTGCGGCGAGAAAGGTCGCC
AAGGGGGATCTGGTTATCATCGCCAGTTACGTCATCGTGGACGGTGAGGAGGCAAAAGGCTGGAAGCCGACCTGTGTGTT
TGTTGATCCGGAAAATCAAATCAAACACTGA

Upstream 100 bases:

>100_bases
ATAGACAATCACGTGTTCGGTGAAGAGCTGAACATCAGATAAAAAAGAAATCACGACATCGGACAGGAACGCGCTTCTGT
GCCGAGGGGAAGGTGAATCC

Downstream 100 bases:

>100_bases
CGTTAACAGGCTTTGAACTTGAACGAATGGAATTGAACCCTCTTGTTCGATAATGTAGATTTTTTTGCTGTTGGCCTGTG
AAGTCTTGATTTCTAAGGGC

Product: aspartate 1-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MQRLMLKSKIHRATVTDADLHYEGSISIDEALMEAADLLPYEKVAIYDVNNGERFTTYVITGKRGSGVICLNGAAARKVA
KGDLVIIASYVIVDGEEAKGWKPTCVFVDPENQIKH

Sequences:

>Translated_116_residues
MQRLMLKSKIHRATVTDADLHYEGSISIDEALMEAADLLPYEKVAIYDVNNGERFTTYVITGKRGSGVICLNGAAARKVA
KGDLVIIASYVIVDGEEAKGWKPTCVFVDPENQIKH
>Mature_116_residues
MQRLMLKSKIHRATVTDADLHYEGSISIDEALMEAADLLPYEKVAIYDVNNGERFTTYVITGKRGSGVICLNGAAARKVA
KGDLVIIASYVIVDGEEAKGWKPTCVFVDPENQIKH

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=115, Percent_Identity=48.695652173913, Blast_Score=123, Evalue=4e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND_SYNAS (Q2LSQ4)

Other databases:

- EMBL:   CP000252
- RefSeq:   YP_461283.1
- ProteinModelPortal:   Q2LSQ4
- SMR:   Q2LSQ4
- STRING:   Q2LSQ4
- GeneID:   3883590
- GenomeReviews:   CP000252_GR
- KEGG:   sat:SYN_00419
- NMPDR:   fig|56780.10.peg.1220
- eggNOG:   COG0853
- HOGENOM:   HBG302821
- OMA:   LYSKIHR
- PhylomeDB:   Q2LSQ4
- BioCyc:   SACI56780:SYN_00419-MONOMER
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294
- TIGRFAMs:   TIGR00223

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 12754; Mature: 12754

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: ACT_SITE 25-25 ACT_SITE 58-58 BINDING 57-57

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRLMLKSKIHRATVTDADLHYEGSISIDEALMEAADLLPYEKVAIYDVNNGERFTTYVI
CCCCHHHHHHCEEECCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEE
TGKRGSGVICLNGAAARKVAKGDLVIIASYVIVDGEEAKGWKPTCVFVDPENQIKH
ECCCCCCEEEECCHHHCEECCCCEEEEEEEEEEECCCCCCCCCEEEEECCHHHCCC
>Mature Secondary Structure
MQRLMLKSKIHRATVTDADLHYEGSISIDEALMEAADLLPYEKVAIYDVNNGERFTTYVI
CCCCHHHHHHCEEECCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEE
TGKRGSGVICLNGAAARKVAKGDLVIIASYVIVDGEEAKGWKPTCVFVDPENQIKH
ECCCCCCEEEECCHHHCEECCCCEEEEEEEEEEECCCCCCCCCEEEEECCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA