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The map label for this gene is tsr [C]

Identifier: 85859032

GI number: 85859032

Start: 1208609

End: 1210555

Strand: Direct

Name: tsr [C]

Synonym: SYN_00971

Alternate gene names: 85859032

Gene position: 1208609-1210555 (Clockwise)

Preceding gene: 85859031

Following gene: 85859033

Centisome position: 38.01

GC content: 50.64

Gene sequence:

>1947_bases
ATGAAAAAACGTACGCTGGAATTCAAATTGGTAGCCGGAGGAATTTTGCTGGTCCTTATACCGCTTCTCGTGACCGGTAT
TTTTTCCACCTTGAGGTCGTCAAAAGCACTGGAAAGCACAGCGATGGGGCAATCAGAACAGGTAGCAAAAAGTGTGGGCA
ACATGGTGCAGCTTGTTCTTCAGGAAGAGATCAAGGTGGCTACCCATCTGGCTTCCAATAACACGGTCATCGAGGCTGCA
GCCGGGGTGGCCGGAAAAGGGGTGGACGGCGCGGCCGTTGAACTCACCAGGGCATGTTCAACTCTGGGTATGATTTTGAA
GAAATCGGGAACTGATTATGAATACATTGTTGTTACCGATTCCAGTGGCAAGATTATTGCGGACAGCAATGGAGGGCAGC
TCAGGGGGATGGATATCTCCGAGAGGGATTACATCAAGGTGCCGAAGAGCACCGGTAAGAGTCACGTAGGGGAAGTCAGT
AAATCCAAGGCTACGGGAAAACCCATCGCCCCCTTTGGCGCCCCGGTCTACTCTTCCTCTGGTCAGTTTCTGGGAGTCGT
GGGATGCGTTGCCAATATCGACTTCATCAGTGATAAGATCGGGGCGGTGAAAATCGGTGAAACGGGCTACGCTTATGTGC
TGAATAAGGAAGGAGTCGTAATTGCCCATCCCAAGGCGGATTTTATTTTGGAAAAGAATCTGGCCAAGGAGGAAGGCATG
GTTGAATTCGCCCAGCAAATGCTGGCCCGGAAGTCGGGAACCGGCAAATATGCCCTTGCGGGAGTAGAAAAAATCGGAGG
ATATGCGCCCGTGGAACTCACCGCCTGGAGCGTCGGCGTGGTTCAGGACTATGAAGAGCTTATGGCACCGGCCGTTTCCA
TCCGGAATTTCATGATGTTGATTACCGCTGCGTTTCTTGCTCTCGCTGTTGTTCTGGTGCTGTATTTTGCCCGAAGTATA
AGCCGACCCATCAAGAACGCGGTAAATACTCTGAATGATTCAGCAGACCAGATTGCTTCAGCGTCCATGCAGGTCTCCTC
TGCCAGTCAGTCATTGGCTGAAGGGGCTTCCGAACAGGCCTCTGCACTTGAAGAGACCTCTTCTTCTCTGGAAGAAATGT
CTTCGATGACCAAACAGAATGCAGGAAACGCCAGTCAGGCCGACAGCCTGATGAGACAAGCCAATCAGGTTGTCCAGCGA
GCCAATTCATCCATGATTCATCTGACGGATTCCATGCAGCAAATCTCCAAGGCCAGTGACGAGACCTCGAAAATCATTAA
AACCATTGATGAAGTTGCTTTTCAAACGAATTTGCTGGCTTTGAATGCGGCTGTGGAAGCGGCCAGAGCCGGCGAGGCGG
GAGCCGGATTTGCCGTTGTGGCTGAAGAAGTCAGAAACTTGGCCATGCGAGCAGCGGATGCCGCCCGGAATACGGCCAGC
CTTATCGAAGGTACCGTCAAAAAGGTGAAAGAAGGTTCCGATCTGGTTGTAAAAACCAATGAAGCCTTCATGGAAGTGGC
GGAAAGTTCAGAGAAAGTAGGTGGTCTGGTCAGTGAAATTGCAGCAGCTTCCAACGAACAGGCCCAGGGCATCGATCAAG
TGAATAAGGCTGTGGCGGAAATGGATAAAGTGACCCAGCAAACGGCAGCCAATGCGGAAGAATCCGCTTCGGCGTCTGAG
GAATTGAACGCTCAGGCCCAGCAGATGAAAAATATTTCTAATGACCTGGCTGATATTGTCGGTGCTGTCAATTCCTCGCT
CGCTTCGAGTGTAAACGGGTTTCAAGCTCAGGCTGCTCATGATTCGCGGAAAGGCATTCTGAAAAAGATTTCAGCATTGC
CGATGAGCCGATCAATAGTTCGGAGCCCTTCGCCAAAACAAAAAGGTAAAGAAATACGACCTGACCAGATTATTCCTCTT
GAGGATGACGAGTTCAAGGATTTTTAG

Upstream 100 bases:

>100_bases
ATCTTGCCTCAGGCATATTTCCCCCCGGCGTTGCAGAACACACCCATGTATGTTTTTGGGGAAAGCATTTTGAGGAAATA
AAATTCAGGAGGGGAAGAGT

Downstream 100 bases:

>100_bases
ATCTCACAGTCATCTGTAAACCCTGAAATAAATAATTATACAGCAGTGATTTTTTTCAGGAACTGAAATGAATTCAGGAC
CTCCCTTTCTTCTTTAGGAA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 648; Mature: 648

Protein sequence:

>648_residues
MKKRTLEFKLVAGGILLVLIPLLVTGIFSTLRSSKALESTAMGQSEQVAKSVGNMVQLVLQEEIKVATHLASNNTVIEAA
AGVAGKGVDGAAVELTRACSTLGMILKKSGTDYEYIVVTDSSGKIIADSNGGQLRGMDISERDYIKVPKSTGKSHVGEVS
KSKATGKPIAPFGAPVYSSSGQFLGVVGCVANIDFISDKIGAVKIGETGYAYVLNKEGVVIAHPKADFILEKNLAKEEGM
VEFAQQMLARKSGTGKYALAGVEKIGGYAPVELTAWSVGVVQDYEELMAPAVSIRNFMMLITAAFLALAVVLVLYFARSI
SRPIKNAVNTLNDSADQIASASMQVSSASQSLAEGASEQASALEETSSSLEEMSSMTKQNAGNASQADSLMRQANQVVQR
ANSSMIHLTDSMQQISKASDETSKIIKTIDEVAFQTNLLALNAAVEAARAGEAGAGFAVVAEEVRNLAMRAADAARNTAS
LIEGTVKKVKEGSDLVVKTNEAFMEVAESSEKVGGLVSEIAAASNEQAQGIDQVNKAVAEMDKVTQQTAANAEESASASE
ELNAQAQQMKNISNDLADIVGAVNSSLASSVNGFQAQAAHDSRKGILKKISALPMSRSIVRSPSPKQKGKEIRPDQIIPL
EDDEFKDF

Sequences:

>Translated_648_residues
MKKRTLEFKLVAGGILLVLIPLLVTGIFSTLRSSKALESTAMGQSEQVAKSVGNMVQLVLQEEIKVATHLASNNTVIEAA
AGVAGKGVDGAAVELTRACSTLGMILKKSGTDYEYIVVTDSSGKIIADSNGGQLRGMDISERDYIKVPKSTGKSHVGEVS
KSKATGKPIAPFGAPVYSSSGQFLGVVGCVANIDFISDKIGAVKIGETGYAYVLNKEGVVIAHPKADFILEKNLAKEEGM
VEFAQQMLARKSGTGKYALAGVEKIGGYAPVELTAWSVGVVQDYEELMAPAVSIRNFMMLITAAFLALAVVLVLYFARSI
SRPIKNAVNTLNDSADQIASASMQVSSASQSLAEGASEQASALEETSSSLEEMSSMTKQNAGNASQADSLMRQANQVVQR
ANSSMIHLTDSMQQISKASDETSKIIKTIDEVAFQTNLLALNAAVEAARAGEAGAGFAVVAEEVRNLAMRAADAARNTAS
LIEGTVKKVKEGSDLVVKTNEAFMEVAESSEKVGGLVSEIAAASNEQAQGIDQVNKAVAEMDKVTQQTAANAEESASASE
ELNAQAQQMKNISNDLADIVGAVNSSLASSVNGFQAQAAHDSRKGILKKISALPMSRSIVRSPSPKQKGKEIRPDQIIPL
EDDEFKDF
>Mature_648_residues
MKKRTLEFKLVAGGILLVLIPLLVTGIFSTLRSSKALESTAMGQSEQVAKSVGNMVQLVLQEEIKVATHLASNNTVIEAA
AGVAGKGVDGAAVELTRACSTLGMILKKSGTDYEYIVVTDSSGKIIADSNGGQLRGMDISERDYIKVPKSTGKSHVGEVS
KSKATGKPIAPFGAPVYSSSGQFLGVVGCVANIDFISDKIGAVKIGETGYAYVLNKEGVVIAHPKADFILEKNLAKEEGM
VEFAQQMLARKSGTGKYALAGVEKIGGYAPVELTAWSVGVVQDYEELMAPAVSIRNFMMLITAAFLALAVVLVLYFARSI
SRPIKNAVNTLNDSADQIASASMQVSSASQSLAEGASEQASALEETSSSLEEMSSMTKQNAGNASQADSLMRQANQVVQR
ANSSMIHLTDSMQQISKASDETSKIIKTIDEVAFQTNLLALNAAVEAARAGEAGAGFAVVAEEVRNLAMRAADAARNTAS
LIEGTVKKVKEGSDLVVKTNEAFMEVAESSEKVGGLVSEIAAASNEQAQGIDQVNKAVAEMDKVTQQTAANAEESASASE
ELNAQAQQMKNISNDLADIVGAVNSSLASSVNGFQAQAAHDSRKGILKKISALPMSRSIVRSPSPKQKGKEIRPDQIIPL
EDDEFKDF

Specific function: May bind attractants or detect changes in the extracellular concentration of soluble sugars [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=230, Percent_Identity=46.5217391304348, Blast_Score=188, Evalue=1e-48,
Organism=Escherichia coli, GI1788195, Length=238, Percent_Identity=44.1176470588235, Blast_Score=182, Evalue=6e-47,
Organism=Escherichia coli, GI1788194, Length=269, Percent_Identity=39.7769516728625, Blast_Score=177, Evalue=2e-45,
Organism=Escherichia coli, GI1787690, Length=242, Percent_Identity=41.7355371900826, Blast_Score=170, Evalue=2e-43,
Organism=Escherichia coli, GI1789453, Length=248, Percent_Identity=35.0806451612903, Blast_Score=139, Evalue=7e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 68200; Mature: 68200

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRTLEFKLVAGGILLVLIPLLVTGIFSTLRSSKALESTAMGQSEQVAKSVGNMVQLVL
CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QEEIKVATHLASNNTVIEAAAGVAGKGVDGAAVELTRACSTLGMILKKSGTDYEYIVVTD
HHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC
SSGKIIADSNGGQLRGMDISERDYIKVPKSTGKSHVGEVSKSKATGKPIAPFGAPVYSSS
CCCCEEEECCCCEEECCCCCCCCCEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
GQFLGVVGCVANIDFISDKIGAVKIGETGYAYVLNKEGVVIAHPKADFILEKNLAKEEGM
CCEEEHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCEEEECCCCCHHHHHHCCHHCCH
VEFAQQMLARKSGTGKYALAGVEKIGGYAPVELTAWSVGVVQDYEELMAPAVSIRNFMML
HHHHHHHHHHCCCCCCEEHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
ITAAFLALAVVLVLYFARSISRPIKNAVNTLNDSADQIASASMQVSSASQSLAEGASEQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHH
SALEETSSSLEEMSSMTKQNAGNASQADSLMRQANQVVQRANSSMIHLTDSMQQISKASD
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCH
ETSKIIKTIDEVAFQTNLLALNAAVEAARAGEAGAGFAVVAEEVRNLAMRAADAARNTAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LIEGTVKKVKEGSDLVVKTNEAFMEVAESSEKVGGLVSEIAAASNEQAQGIDQVNKAVAE
HHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHH
MDKVTQQTAANAEESASASEELNAQAQQMKNISNDLADIVGAVNSSLASSVNGFQAQAAH
HHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
DSRKGILKKISALPMSRSIVRSPSPKQKGKEIRPDQIIPLEDDEFKDF
HHHHHHHHHHHHCCCHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKRTLEFKLVAGGILLVLIPLLVTGIFSTLRSSKALESTAMGQSEQVAKSVGNMVQLVL
CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QEEIKVATHLASNNTVIEAAAGVAGKGVDGAAVELTRACSTLGMILKKSGTDYEYIVVTD
HHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC
SSGKIIADSNGGQLRGMDISERDYIKVPKSTGKSHVGEVSKSKATGKPIAPFGAPVYSSS
CCCCEEEECCCCEEECCCCCCCCCEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
GQFLGVVGCVANIDFISDKIGAVKIGETGYAYVLNKEGVVIAHPKADFILEKNLAKEEGM
CCEEEHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCEEEECCCCCHHHHHHCCHHCCH
VEFAQQMLARKSGTGKYALAGVEKIGGYAPVELTAWSVGVVQDYEELMAPAVSIRNFMML
HHHHHHHHHHCCCCCCEEHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
ITAAFLALAVVLVLYFARSISRPIKNAVNTLNDSADQIASASMQVSSASQSLAEGASEQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHH
SALEETSSSLEEMSSMTKQNAGNASQADSLMRQANQVVQRANSSMIHLTDSMQQISKASD
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCH
ETSKIIKTIDEVAFQTNLLALNAAVEAARAGEAGAGFAVVAEEVRNLAMRAADAARNTAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LIEGTVKKVKEGSDLVVKTNEAFMEVAESSEKVGGLVSEIAAASNEQAQGIDQVNKAVAE
HHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHH
MDKVTQQTAANAEESASASEELNAQAQQMKNISNDLADIVGAVNSSLASSVNGFQAQAAH
HHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
DSRKGILKKISALPMSRSIVRSPSPKQKGKEIRPDQIIPLEDDEFKDF
HHHHHHHHHHHHCCCHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8436949 [H]