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The map label for this gene is oadB [H]

Identifier: 85859006

GI number: 85859006

Start: 1186763

End: 1187965

Strand: Direct

Name: oadB [H]

Synonym: SYN_00115

Alternate gene names: 85859006

Gene position: 1186763-1187965 (Clockwise)

Preceding gene: 85859005

Following gene: 85859007

Centisome position: 37.33

GC content: 53.78

Gene sequence:

>1203_bases
ATGAATATCGATGTATTATCATTGTTTCAGGGTATTGCCACGCTGGTCGGGCAGGACCCGACATTTGCAGTAGCCCGCAT
CGTATTGATGCTTCTGGGAATATCCTTCGTTTATCTTGGCTACAAGGGAATCCTGGAAGCCCTCATCATGATCCCCATGG
GCCTGGGGATGGCAACGGTCAATGCGTCCGTTTTATTTTTTCCCGACGGAAAAACGGGAACCATTTTTCTTGATCCCCTG
GTTACAGATCCCTCGGCCCTGGTCAATATTTTACAGATCAACTGGCTCCAGCCCATCTACACGATGAGCTTCACCAACGG
ATTGATCGCCTGCCTCGTTTTCATCGGCATTGGGGTATTGTGCGACATCGGCTTTGTGCTGGCACGCCCCTTCAGCAGCA
TGTTCCTCGCGCTCTGGGGCGAGTTGGGTTCCGTTGCCGTCTTCCCGCTGGCCGTGGCCTTCGGCATGACCCCCCAGGAA
GCGGCGGCGACAGCCATCGTCGGCGGCGCCGACGGCCCCATGGTGCTGTTCACCTCCCTGATGCTGTCCCCGCACCTTTT
CGTTCCCATCGGCATTGTGGCCTATCTTTATCTCAGCCTCTGCTACGGTTTGTATCCCTATCTGATCAAGGCTTTGATTC
CCAAGAAAATGCGGGCCATTCAAATGGATCTCAAAGGCATGCCGCAGATTACACCTCTGCAAAAAATCATGTTTTCTACG
ATTACCGTCACCATCCTCTGCCTGCTTTTTCCTGTTGCCGGACCGCTCTTCGTGTCCTTTTTCCTTGGCATTGTAATCCG
GGAAGCGGGCGTCAAGCCTTATATTGAATTTATTGAGACTACGTTGCTCTACAGCTCAACCTTCTTCCTGGGCCTGCTTC
TCGGTGTTCTCTGCGAGGCCGGCACCATTCTCAATCCAGTTGTCCTGAAGATCCTGATCCTCGGTTCCACGGCACTGATG
GTATCAGGAGTTGGCGGTCTTATCGGCGGGATTCTCCTGTATTACTTCAGCGGGAAAAAATATAACCCGGTCATCGGAAT
TGCCGGGGTTTCCTGTACACCGACCACGGCCAAAGTGGCGCAGAAGGTGGTTTTCAAGGCTAATCCCCGCGCGATGGTCA
TGCCGCTTGCCCTCGGCGCCAACGTCAGCGGCGTTATCACGACGGCGATTCTGGCCGGTATTTACTGCACCCTGCTGAAG
TAA

Upstream 100 bases:

>100_bases
TTCTTTAAATCAGAAAAGAAATAATCTTCAGCATCGTGAAGAGCAATCACCGGTAAAATGTATCTTTTTAAATTTTAACA
TCTGGAATGGAGATTATAAC

Downstream 100 bases:

>100_bases
TGTTCAAGCAGAAACGCCAGTGGTGGTGGGTTATTGGAACATGCATCGCGTTGTCGGGGGTCGCTCTGGTGCGGCTCCTC
GCCCCGGAATATCCCCCCGG

Product: Na+-transporting decarboxylase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MNIDVLSLFQGIATLVGQDPTFAVARIVLMLLGISFVYLGYKGILEALIMIPMGLGMATVNASVLFFPDGKTGTIFLDPL
VTDPSALVNILQINWLQPIYTMSFTNGLIACLVFIGIGVLCDIGFVLARPFSSMFLALWGELGSVAVFPLAVAFGMTPQE
AAATAIVGGADGPMVLFTSLMLSPHLFVPIGIVAYLYLSLCYGLYPYLIKALIPKKMRAIQMDLKGMPQITPLQKIMFST
ITVTILCLLFPVAGPLFVSFFLGIVIREAGVKPYIEFIETTLLYSSTFFLGLLLGVLCEAGTILNPVVLKILILGSTALM
VSGVGGLIGGILLYYFSGKKYNPVIGIAGVSCTPTTAKVAQKVVFKANPRAMVMPLALGANVSGVITTAILAGIYCTLLK

Sequences:

>Translated_400_residues
MNIDVLSLFQGIATLVGQDPTFAVARIVLMLLGISFVYLGYKGILEALIMIPMGLGMATVNASVLFFPDGKTGTIFLDPL
VTDPSALVNILQINWLQPIYTMSFTNGLIACLVFIGIGVLCDIGFVLARPFSSMFLALWGELGSVAVFPLAVAFGMTPQE
AAATAIVGGADGPMVLFTSLMLSPHLFVPIGIVAYLYLSLCYGLYPYLIKALIPKKMRAIQMDLKGMPQITPLQKIMFST
ITVTILCLLFPVAGPLFVSFFLGIVIREAGVKPYIEFIETTLLYSSTFFLGLLLGVLCEAGTILNPVVLKILILGSTALM
VSGVGGLIGGILLYYFSGKKYNPVIGIAGVSCTPTTAKVAQKVVFKANPRAMVMPLALGANVSGVITTAILAGIYCTLLK
>Mature_400_residues
MNIDVLSLFQGIATLVGQDPTFAVARIVLMLLGISFVYLGYKGILEALIMIPMGLGMATVNASVLFFPDGKTGTIFLDPL
VTDPSALVNILQINWLQPIYTMSFTNGLIACLVFIGIGVLCDIGFVLARPFSSMFLALWGELGSVAVFPLAVAFGMTPQE
AAATAIVGGADGPMVLFTSLMLSPHLFVPIGIVAYLYLSLCYGLYPYLIKALIPKKMRAIQMDLKGMPQITPLQKIMFST
ITVTILCLLFPVAGPLFVSFFLGIVIREAGVKPYIEFIETTLLYSSTFFLGLLLGVLCEAGTILNPVVLKILILGSTALM
VSGVGGLIGGILLYYFSGKKYNPVIGIAGVSCTPTTAKVAQKVVFKANPRAMVMPLALGANVSGVITTAILAGIYCTLLK

Specific function: Lyase and sodium transporter [H]

COG id: COG1883

COG function: function code C; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gcdB/mmdB/oadB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005661 [H]

Pfam domain/function: PF03977 OAD_beta [H]

EC number: =4.1.1.3 [H]

Molecular weight: Translated: 42536; Mature: 42536

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIDVLSLFQGIATLVGQDPTFAVARIVLMLLGISFVYLGYKGILEALIMIPMGLGMATV
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
NASVLFFPDGKTGTIFLDPLVTDPSALVNILQINWLQPIYTMSFTNGLIACLVFIGIGVL
CCEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
CDIGFVLARPFSSMFLALWGELGSVAVFPLAVAFGMTPQEAAATAIVGGADGPMVLFTSL
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHEEECCCCCHHHHHHHH
MLSPHLFVPIGIVAYLYLSLCYGLYPYLIKALIPKKMRAIQMDLKGMPQITPLQKIMFST
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ITVTILCLLFPVAGPLFVSFFLGIVIREAGVKPYIEFIETTLLYSSTFFLGLLLGVLCEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GTILNPVVLKILILGSTALMVSGVGGLIGGILLYYFSGKKYNPVIGIAGVSCTPTTAKVA
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHH
QKVVFKANPRAMVMPLALGANVSGVITTAILAGIYCTLLK
HHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIDVLSLFQGIATLVGQDPTFAVARIVLMLLGISFVYLGYKGILEALIMIPMGLGMATV
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
NASVLFFPDGKTGTIFLDPLVTDPSALVNILQINWLQPIYTMSFTNGLIACLVFIGIGVL
CCEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
CDIGFVLARPFSSMFLALWGELGSVAVFPLAVAFGMTPQEAAATAIVGGADGPMVLFTSL
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHEEECCCCCHHHHHHHH
MLSPHLFVPIGIVAYLYLSLCYGLYPYLIKALIPKKMRAIQMDLKGMPQITPLQKIMFST
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ITVTILCLLFPVAGPLFVSFFLGIVIREAGVKPYIEFIETTLLYSSTFFLGLLLGVLCEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GTILNPVVLKILILGSTALMVSGVGGLIGGILLYYFSGKKYNPVIGIAGVSCTPTTAKVA
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHH
QKVVFKANPRAMVMPLALGANVSGVITTAILAGIYCTLLK
HHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]