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The map label for this gene is nudF [H]

Identifier: 85858980

GI number: 85858980

Start: 1161765

End: 1162364

Strand: Direct

Name: nudF [H]

Synonym: SYN_01018

Alternate gene names: 85858980

Gene position: 1161765-1162364 (Clockwise)

Preceding gene: 85858978

Following gene: 85858981

Centisome position: 36.54

GC content: 45.83

Gene sequence:

>600_bases
TTGAAACGATTGAGGAAATATGATATTTTTTCCCTCAAACAACAGCATGTCTTTGTTGTGTTCCTTGAAAATACAACTGC
TATTTCAAGGAATTGCGTGATAACGTTAAGATTGTGTCGGAATAACGTAAATTTAAAGCCGAAGAAATTCGCTGAAAAGG
TGATGGGAGTCATGTCTAAACGTGAGTATCCGGATTGTCCCCGCGTGGGTGTGGGAGCCATTGTTGTCAAGGATGGCCAT
GTGCTCCTGGTGAAACGCGCCGCAGCGCCTAATAAAGGACTGTGGGCCATACCGGGAGGTTCTCTGAAGCTGGGTGAAAC
CTTGAAGGACGGAGCAGAACGGGAAATCCTTGAAGAAACTGGGATTGTGGTTGATGCCGGACGCCCTGTCTACGCTTTCG
ACTACTTCGAGAGAGATCCGGAAGGAAAAATCCGTTTTCATTTCGTTATTGTGGATATGCTGGCCGATTACATTCGAGGC
GAGGTGAAAGCTGCCGATGATGCCTTGGATGCTCGCTGGCTGTCACCGGAAGATTTGAAAGATTTCGAATTATCCGTCAG
CACCATGAAGATTCTCAAATATCTAAAATTCATCGGTTAA

Upstream 100 bases:

>100_bases
GGAAACCCTTATTTAGACGGGGTTATTGGCTGAAAAGTGATTCAGGATAAGGATGAAATGGCGCTCTTTCCTCACGCTTC
TGGCGTAAACAAAGAACTCA

Downstream 100 bases:

>100_bases
TTTTTAATCGTTCGGTTTAAGAGGGATAATCCGGGAAGTCAGATTGGGCATCTCTTCGATGTCCGAGGTTTTATAAATTG
ATGCCATTGTCAGCCAGCCG

Product: ADP-ribose pyrophosphatase

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MKRLRKYDIFSLKQQHVFVVFLENTTAISRNCVITLRLCRNNVNLKPKKFAEKVMGVMSKREYPDCPRVGVGAIVVKDGH
VLLVKRAAAPNKGLWAIPGGSLKLGETLKDGAEREILEETGIVVDAGRPVYAFDYFERDPEGKIRFHFVIVDMLADYIRG
EVKAADDALDARWLSPEDLKDFELSVSTMKILKYLKFIG

Sequences:

>Translated_199_residues
MKRLRKYDIFSLKQQHVFVVFLENTTAISRNCVITLRLCRNNVNLKPKKFAEKVMGVMSKREYPDCPRVGVGAIVVKDGH
VLLVKRAAAPNKGLWAIPGGSLKLGETLKDGAEREILEETGIVVDAGRPVYAFDYFERDPEGKIRFHFVIVDMLADYIRG
EVKAADDALDARWLSPEDLKDFELSVSTMKILKYLKFIG
>Mature_199_residues
MKRLRKYDIFSLKQQHVFVVFLENTTAISRNCVITLRLCRNNVNLKPKKFAEKVMGVMSKREYPDCPRVGVGAIVVKDGH
VLLVKRAAAPNKGLWAIPGGSLKLGETLKDGAEREILEETGIVVDAGRPVYAFDYFERDPEGKIRFHFVIVDMLADYIRG
EVKAADDALDARWLSPEDLKDFELSVSTMKILKYLKFIG

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 22533; Mature: 22533

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLRKYDIFSLKQQHVFVVFLENTTAISRNCVITLRLCRNNVNLKPKKFAEKVMGVMSK
CCCCHHCCCEEECCCEEEEEEEECCCEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHC
REYPDCPRVGVGAIVVKDGHVLLVKRAAAPNKGLWAIPGGSLKLGETLKDGAEREILEET
CCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCEEEECCCCEEECHHHHCCHHHHHHHHC
GIVVDAGRPVYAFDYFERDPEGKIRFHFVIVDMLADYIRGEVKAADDALDARWLSPEDLK
CEEEECCCCEEEEECCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCCCHHHCCCCCCCCCC
DFELSVSTMKILKYLKFIG
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRLRKYDIFSLKQQHVFVVFLENTTAISRNCVITLRLCRNNVNLKPKKFAEKVMGVMSK
CCCCHHCCCEEECCCEEEEEEEECCCEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHC
REYPDCPRVGVGAIVVKDGHVLLVKRAAAPNKGLWAIPGGSLKLGETLKDGAEREILEET
CCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCEEEECCCCEEECHHHHCCHHHHHHHHC
GIVVDAGRPVYAFDYFERDPEGKIRFHFVIVDMLADYIRGEVKAADDALDARWLSPEDLK
CEEEECCCCEEEEECCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCCCHHHCCCCCCCCCC
DFELSVSTMKILKYLKFIG
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]