| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858919
Identifier: 85858919
GI number: 85858919
Start: 1099085
End: 1099351
Strand: Direct
Name: 85858919
Synonym: SYN_02132
Alternate gene names: NA
Gene position: 1099085-1099351 (Clockwise)
Preceding gene: 85858918
Following gene: 85858920
Centisome position: 34.57
GC content: 53.56
Gene sequence:
>267_bases TTGAGGGAAAATCATATGAACAGAAGAATCGGCACCGTCAGCATCATCATAACCAGTCGTTCGGAACAGGCTGCGCGGGT CAACAGCATTCTGTCGGAGCATGGCGATATTGTCATCGGCCGGATGGGCCTTCCCTATCCTCCGGCAGCTCTGCATATCC TGTCCCTGATTGTTCACGGCACGACGGATGAAATCGGCGCCATGACGGGGAAGCTTGGCTCCCTGGATGGTGTCAAAGTC AAATCGGCACTTCAGAAAGTTGCGTAA
Upstream 100 bases:
>100_bases CCGGGCGGATGGATTTTCCGGGAGAGGGAAGGAGAGGACGAATTCCTAAAATGCTTATCTGGAGAGGTTTGATTCCCATT GGGAGTCAAACCTCTTTTTT
Downstream 100 bases:
>100_bases TTTCAGGAAAGGGCGAATTCATGAAGGATTTTATCAGAGACACGGAGATTGAAGAACTGCTTCGAAAGGCAGGCTCTCCC GACAGAAAACAGGTTCTGGA
Product: transcriptional regulator
Products: NA
Alternate protein names: CopG Family Transcriptional Regulator; Transcriptional Regulator CopG Family
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MRENHMNRRIGTVSIIITSRSEQAARVNSILSEHGDIVIGRMGLPYPPAALHILSLIVHGTTDEIGAMTGKLGSLDGVKV KSALQKVA
Sequences:
>Translated_88_residues MRENHMNRRIGTVSIIITSRSEQAARVNSILSEHGDIVIGRMGLPYPPAALHILSLIVHGTTDEIGAMTGKLGSLDGVKV KSALQKVA >Mature_88_residues MRENHMNRRIGTVSIIITSRSEQAARVNSILSEHGDIVIGRMGLPYPPAALHILSLIVHGTTDEIGAMTGKLGSLDGVKV KSALQKVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9400; Mature: 9400
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRENHMNRRIGTVSIIITSRSEQAARVNSILSEHGDIVIGRMGLPYPPAALHILSLIVHG CCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCC TTDEIGAMTGKLGSLDGVKVKSALQKVA CCCHHHHHHCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MRENHMNRRIGTVSIIITSRSEQAARVNSILSEHGDIVIGRMGLPYPPAALHILSLIVHG CCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCC TTDEIGAMTGKLGSLDGVKVKSALQKVA CCCHHHHHHCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA