| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is pit [H]
Identifier: 85858882
GI number: 85858882
Start: 1064338
End: 1065339
Strand: Direct
Name: pit [H]
Synonym: SYN_00387
Alternate gene names: 85858882
Gene position: 1064338-1065339 (Clockwise)
Preceding gene: 85858881
Following gene: 85858885
Centisome position: 33.48
GC content: 50.3
Gene sequence:
>1002_bases ATGCTTGATTCTCTTTTCTTTGTTATCTTTTTGGTCGGAGTGGCTCTGATTTTTGACTTCATCAACGGCTTTCACGATTC TGCAAACTCCATTGCCACCGTGGTCTCCACCCGAGTACTCTCACCGAAATATGCAGTCCTCTGGGCGGCATTTTTCAATT TTATAGCCTTTCTTTTTATCGGTGTCCCGGTTGCCAAAACAATCGGAACCGGCATCATCGACCCGCGCATTATTGATAAT CTGCTCATCTTCGCCACACTGAGTGCGGCAATTATCTGGAATCTCATCACCTGGTATTTTGGATTGCCGAGTAGTTCATC CCACGCACTGATCGGAGGGCTGATTGGCGCCGGGATCGTAAAAGGGGGAACAGAAGTCCTTGTCTGGAAGGGCATCACCA AAACAACCATCTTCATTGTTGTTTCGCCGGTCATCGGCATGATGATTGGATTCGTGCTTATGCTACTTGTTCTGCACCTG TTCCGCAGGGCTCATCCTACTAAAATGGATCATGTATTCCGAAAAATGCAGCTTTTTTCGGCCGCTGTTTACAGTTTGGG GCACGGCATGAATGACGCACAAAAAACCATGGGTATTATTGCCATGGTCCTTTTCAGCAGTGGACTATTGGGGCCGACTT TCCACATCCCCTTCTGGATCATCATTACGTGCCATGCAGCCATTGCACTGGGAACGGTTTCGGGAGGGTGGAGAATTGTA AAAACGATGGGTACCCGCATCACAAAGCTTCGACCGATAGGCGGGTTTTGTGCGGAGACAGCAGCTGCCATGTCTATCAT TGGAGCCTCTCTGGCGGGCATTCCGGTCAGCACAACCCACACCATCACGGGAGCGATATTGGGAGTCGGTTCCACAATTC GATTTAGTGCCGTCCGTTGGGGGATCGCCGGAACGATAATCTGGGCCTGGGTTCTCACCATTCCGATTTCGGCACTCATT TCCGCCCTGATTTACTGTGTCGCGCGGTCCTTGTCCCAGTAG
Upstream 100 bases:
>100_bases GTCGAACTCATCAAGTGGAAGGAAATTTTTGAGCGGATCGAAGAGGCTATTGATGTCTGCGAAGATGTATCCAATATTGT CGAGGGGATCGTTCTGAAAA
Downstream 100 bases:
>100_bases AATCCCTCTCTGATTTAAAAGATGCCGCCGATTTAAAAGAGCTCTGTTGGAGCTTGTCACTTCATTCGCTGCTTTCCCAA AACCCCGCCGGAAACAATAA
Product: phosphate/sulphate permease
Products: Proton [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MLDSLFFVIFLVGVALIFDFINGFHDSANSIATVVSTRVLSPKYAVLWAAFFNFIAFLFIGVPVAKTIGTGIIDPRIIDN LLIFATLSAAIIWNLITWYFGLPSSSSHALIGGLIGAGIVKGGTEVLVWKGITKTTIFIVVSPVIGMMIGFVLMLLVLHL FRRAHPTKMDHVFRKMQLFSAAVYSLGHGMNDAQKTMGIIAMVLFSSGLLGPTFHIPFWIIITCHAAIALGTVSGGWRIV KTMGTRITKLRPIGGFCAETAAAMSIIGASLAGIPVSTTHTITGAILGVGSTIRFSAVRWGIAGTIIWAWVLTIPISALI SALIYCVARSLSQ
Sequences:
>Translated_333_residues MLDSLFFVIFLVGVALIFDFINGFHDSANSIATVVSTRVLSPKYAVLWAAFFNFIAFLFIGVPVAKTIGTGIIDPRIIDN LLIFATLSAAIIWNLITWYFGLPSSSSHALIGGLIGAGIVKGGTEVLVWKGITKTTIFIVVSPVIGMMIGFVLMLLVLHL FRRAHPTKMDHVFRKMQLFSAAVYSLGHGMNDAQKTMGIIAMVLFSSGLLGPTFHIPFWIIITCHAAIALGTVSGGWRIV KTMGTRITKLRPIGGFCAETAAAMSIIGASLAGIPVSTTHTITGAILGVGSTIRFSAVRWGIAGTIIWAWVLTIPISALI SALIYCVARSLSQ >Mature_333_residues MLDSLFFVIFLVGVALIFDFINGFHDSANSIATVVSTRVLSPKYAVLWAAFFNFIAFLFIGVPVAKTIGTGIIDPRIIDN LLIFATLSAAIIWNLITWYFGLPSSSSHALIGGLIGAGIVKGGTEVLVWKGITKTTIFIVVSPVIGMMIGFVLMLLVLHL FRRAHPTKMDHVFRKMQLFSAAVYSLGHGMNDAQKTMGIIAMVLFSSGLLGPTFHIPFWIIITCHAAIALGTVSGGWRIV KTMGTRITKLRPIGGFCAETAAAMSIIGASLAGIPVSTTHTITGAILGVGSTIRFSAVRWGIAGTIIWAWVLTIPISALI SALIYCVARSLSQ
Specific function: Low-affinity inorganic phosphate transport (Probable) [H]
COG id: COG0306
COG function: function code P; Phosphate/sulphate permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family. Pit subfamily [H]
Homologues:
Organism=Homo sapiens, GI31543630, Length=160, Percent_Identity=33.75, Blast_Score=92, Evalue=7e-19, Organism=Homo sapiens, GI5803173, Length=155, Percent_Identity=32.258064516129, Blast_Score=82, Evalue=7e-16, Organism=Escherichia coli, GI1789360, Length=221, Percent_Identity=36.6515837104072, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI1789907, Length=217, Percent_Identity=36.8663594470046, Blast_Score=114, Evalue=7e-27, Organism=Caenorhabditis elegans, GI25146401, Length=169, Percent_Identity=29.585798816568, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI71981576, Length=162, Percent_Identity=31.4814814814815, Blast_Score=91, Evalue=9e-19, Organism=Caenorhabditis elegans, GI17539280, Length=165, Percent_Identity=27.2727272727273, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17536725, Length=166, Percent_Identity=27.1084337349398, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI32566716, Length=163, Percent_Identity=27.6073619631902, Blast_Score=69, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6319773, Length=170, Percent_Identity=27.6470588235294, Blast_Score=85, Evalue=2e-17, Organism=Drosophila melanogaster, GI21356511, Length=182, Percent_Identity=27.4725274725275, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001204 [H]
Pfam domain/function: PF01384 PHO4 [H]
EC number: NA
Molecular weight: Translated: 35641; Mature: 35641
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDSLFFVIFLVGVALIFDFINGFHDSANSIATVVSTRVLSPKYAVLWAAFFNFIAFLFI CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH GVPVAKTIGTGIIDPRIIDNLLIFATLSAAIIWNLITWYFGLPSSSSHALIGGLIGAGIV HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH KGGTEVLVWKGITKTTIFIVVSPVIGMMIGFVLMLLVLHLFRRAHPTKMDHVFRKMQLFS CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AAVYSLGHGMNDAQKTMGIIAMVLFSSGLLGPTFHIPFWIIITCHAAIALGTVSGGWRIV HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH KTMGTRITKLRPIGGFCAETAAAMSIIGASLAGIPVSTTHTITGAILGVGSTIRFSAVRW HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHH GIAGTIIWAWVLTIPISALISALIYCVARSLSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLDSLFFVIFLVGVALIFDFINGFHDSANSIATVVSTRVLSPKYAVLWAAFFNFIAFLFI CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH GVPVAKTIGTGIIDPRIIDNLLIFATLSAAIIWNLITWYFGLPSSSSHALIGGLIGAGIV HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH KGGTEVLVWKGITKTTIFIVVSPVIGMMIGFVLMLLVLHLFRRAHPTKMDHVFRKMQLFS CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AAVYSLGHGMNDAQKTMGIIAMVLFSSGLLGPTFHIPFWIIITCHAAIALGTVSGGWRIV HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH KTMGTRITKLRPIGGFCAETAAAMSIIGASLAGIPVSTTHTITGAILGVGSTIRFSAVRW HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHH GIAGTIIWAWVLTIPISALISALIYCVARSLSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; phosphate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + phosphate [Periplasm] = Proton [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9696772; 11481430 [H]