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The map label for this gene is yrbE [C]

Identifier: 85858832

GI number: 85858832

Start: 1024589

End: 1025368

Strand: Direct

Name: yrbE [C]

Synonym: SYN_00411

Alternate gene names: 85858832

Gene position: 1024589-1025368 (Clockwise)

Preceding gene: 85858831

Following gene: 85858833

Centisome position: 32.23

GC content: 54.74

Gene sequence:

>780_bases
ATGGGAATCCTCACGGCTTTCGCCGATTCTCTGGGAAGGAGAATCCTGCACGGGGTTGAGGAAATGGGCAGGATTATCCT
TCTTTTTCTTTCTGTTGTCGCTTGGACGTTTCGCCCCCCCCTTCGCCTCCGACTCATATTCAAACAGATGGAATTTGTCG
GCGTGAAGTCGATTTTTGTTGTCGTACTTACAGGGGCCTTTACCGGCATGGTCATGGCCCTTCAGGGATATCACGGCTTC
AAGATGTTCAGCGCGGAGAGTCTGGTCGGGGCCACCGTTGCCCTGGGGATGACCCGGGAGCTCGGACCGGTGCTTACGTC
CCTGATGGTCACCGCCCGGGCGGGTTCCGCCATGGCGGCCGAACTGGGAACCATGCGAGTGACGGAACAGATCGATGCTC
TTTACGTCATGGCGGCGAATCCGATTCAGCACCTCATCGTGCCAAGAATGATCGCCTCGATCCTGATGCTGCCTCTGCTA
ACTGTTGTTTCTGATTTTGTAGGGATTTTAGGCGGCTATTTTGTAGGGGTCAGCGTACTTAACATCAATGAAGGGGTTTT
TGTAAAGAACATCACCAGAATCGTCGAACTGGGAGACATCTACAACGGCTTGATCAAGGCAGCCTGCTTCGGTCTGATCC
TCTCGCTCATAGGCTGTTACAAAGGGTTTCATGCCCGGGGAGGGGCTGAAGGCGTCGGCCGGGCGACCACGGAAGCCGTT
GTGCTTTCGTCGATCAGCATCCTGGTCGGCGACTATTTCCTGACCGCCATCATGTTTTAG

Upstream 100 bases:

>100_bases
GGCCGCCGCATCGGGAATAACCCAGACCGGACTGGTTGACCGAATTCTGGAGGCGGCTCTTTCCGTTCACGCCGGCAAAA
AAGGACCGCTGTAAAAGTTT

Downstream 100 bases:

>100_bases
CCGGTTCTCGGAAATACATGAATATTCTAAATTTCTATGATTAAATTGATTGATGTATGCAAATCCTTCGGGACGCAGCG
GGTCCTTGACGAGCTCAATC

Product: organic solvents resistance ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MGILTAFADSLGRRILHGVEEMGRIILLFLSVVAWTFRPPLRLRLIFKQMEFVGVKSIFVVVLTGAFTGMVMALQGYHGF
KMFSAESLVGATVALGMTRELGPVLTSLMVTARAGSAMAAELGTMRVTEQIDALYVMAANPIQHLIVPRMIASILMLPLL
TVVSDFVGILGGYFVGVSVLNINEGVFVKNITRIVELGDIYNGLIKAACFGLILSLIGCYKGFHARGGAEGVGRATTEAV
VLSSISILVGDYFLTAIMF

Sequences:

>Translated_259_residues
MGILTAFADSLGRRILHGVEEMGRIILLFLSVVAWTFRPPLRLRLIFKQMEFVGVKSIFVVVLTGAFTGMVMALQGYHGF
KMFSAESLVGATVALGMTRELGPVLTSLMVTARAGSAMAAELGTMRVTEQIDALYVMAANPIQHLIVPRMIASILMLPLL
TVVSDFVGILGGYFVGVSVLNINEGVFVKNITRIVELGDIYNGLIKAACFGLILSLIGCYKGFHARGGAEGVGRATTEAV
VLSSISILVGDYFLTAIMF
>Mature_258_residues
GILTAFADSLGRRILHGVEEMGRIILLFLSVVAWTFRPPLRLRLIFKQMEFVGVKSIFVVVLTGAFTGMVMALQGYHGFK
MFSAESLVGATVALGMTRELGPVLTSLMVTARAGSAMAAELGTMRVTEQIDALYVMAANPIQHLIVPRMIASILMLPLLT
VVSDFVGILGGYFVGVSVLNINEGVFVKNITRIVELGDIYNGLIKAACFGLILSLIGCYKGFHARGGAEGVGRATTEAVV
LSSISILVGDYFLTAIMF

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=261, Percent_Identity=40.9961685823755, Blast_Score=176, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 27786; Mature: 27655

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGILTAFADSLGRRILHGVEEMGRIILLFLSVVAWTFRPPLRLRLIFKQMEFVGVKSIFV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VVLTGAFTGMVMALQGYHGFKMFSAESLVGATVALGMTRELGPVLTSLMVTARAGSAMAA
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ELGTMRVTEQIDALYVMAANPIQHLIVPRMIASILMLPLLTVVSDFVGILGGYFVGVSVL
HHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
NINEGVFVKNITRIVELGDIYNGLIKAACFGLILSLIGCYKGFHARGGAEGVGRATTEAV
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
VLSSISILVGDYFLTAIMF
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GILTAFADSLGRRILHGVEEMGRIILLFLSVVAWTFRPPLRLRLIFKQMEFVGVKSIFV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VVLTGAFTGMVMALQGYHGFKMFSAESLVGATVALGMTRELGPVLTSLMVTARAGSAMAA
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ELGTMRVTEQIDALYVMAANPIQHLIVPRMIASILMLPLLTVVSDFVGILGGYFVGVSVL
HHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
NINEGVFVKNITRIVELGDIYNGLIKAACFGLILSLIGCYKGFHARGGAEGVGRATTEAV
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
VLSSISILVGDYFLTAIMF
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA