| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
Click here to switch to the map view.
The map label for this gene is fliG [H]
Identifier: 85858818
GI number: 85858818
Start: 1008357
End: 1009361
Strand: Direct
Name: fliG [H]
Synonym: SYN_01471
Alternate gene names: 85858818
Gene position: 1008357-1009361 (Clockwise)
Preceding gene: 85858817
Following gene: 85858819
Centisome position: 31.72
GC content: 47.56
Gene sequence:
>1005_bases ATGGCAAGTCTTACAAACGAAGAAAAGGCCGCGATTCTCCTTTTGTCGCTGGAGGAGGAAACAGCCTCTGAAGTGATGAA ACATCTTAAGCCTTCGGAAATCAGACGGCTGGGGAAATACATGAGCCGCGTCAGTACGATTTCATCAGAAACGATCAATT CCATTTCCAGAGAATTCTGTTTTCTCGCCAGAGAGCGGGGAAGACTCATTTCCATAAGTGAAGATGTGACCAAGAACATT GTCATAAAAGCTGTCGGAGAAACAGAAGCGGAAAGTATTCTGAGTGAAGTTGAAAGTATCCGTACCGATGACAATCCAAT CACCGATAAACTTCGGGATGTGGACCCGAAGATTCTTATGGATTTTACAAAATCAGAGCATCCTCAGACGATTGCCTTGA TCCTTGCCCATTTGAAACCTGAAAAATCCGCTCAAATTCTGGAAAGCTTCACCCCGGAAATGCAATTCGAGATTACCAGG CGAATGGCCACTTTGAAAAGCGTCCCTCAGGAATACATTGATGAAGTGGCACGGACACTGGAAAAAGAGATCGTTGCAGG CGCGACGACCGGAGCCGATATCGGCGGCATTCGCATGATGGCAGATATCCTGAACAGAATGAACAGGGCCAGTGAAAACG CGATTCTCACCGCTCTGGAAGACATGGATCCGGAACTGGCCGCGGGTATCCGCAATCTGATGTTTACCTTCGATGATGTC CTTCAGCTTGATGATCGGGGACTGCAGGAGGTGCTTCGGGAAATCAGCAGTGAAGACATTGGCAAAGCCCTGAAACTGGT TGATGAGGGAATGAGAGAGAAGGTTTATCGCAACATGTCCAAGAGAGGGGCGGAGATGCTGAAGGAGGAACTCGATTTGA TGCCTCCGATAAGGATATCCGAAGCGGAAGAAAGCCAGAGAAAGATTGTAGAAATCGCCAAGAAGATGGAAGCCGAAGGC CGGGTTGTTCTCAAGAGGGGAGATGAACAGGATGAATATATATAA
Upstream 100 bases:
>100_bases CCGAGCTGCTGCGTAACTGGTTAAAGTAACATCTATGGTTATTGCAGATTAACTGCTGTACGATGGGGCAATGAACTGAT CTGTTTCTTTAAGGTGCTTT
Downstream 100 bases:
>100_bases ACAGAGCAGAATCATCAAGTCACAGGATGTTTTTTTTGTTTCCAGTGTAGCGAACAATCGCTCGGATTTCATACCATTCA CATTGAATGAGAAGCAGGAG
Product: flagellar motor switch protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MASLTNEEKAAILLLSLEEETASEVMKHLKPSEIRRLGKYMSRVSTISSETINSISREFCFLARERGRLISISEDVTKNI VIKAVGETEAESILSEVESIRTDDNPITDKLRDVDPKILMDFTKSEHPQTIALILAHLKPEKSAQILESFTPEMQFEITR RMATLKSVPQEYIDEVARTLEKEIVAGATTGADIGGIRMMADILNRMNRASENAILTALEDMDPELAAGIRNLMFTFDDV LQLDDRGLQEVLREISSEDIGKALKLVDEGMREKVYRNMSKRGAEMLKEELDLMPPIRISEAEESQRKIVEIAKKMEAEG RVVLKRGDEQDEYI
Sequences:
>Translated_334_residues MASLTNEEKAAILLLSLEEETASEVMKHLKPSEIRRLGKYMSRVSTISSETINSISREFCFLARERGRLISISEDVTKNI VIKAVGETEAESILSEVESIRTDDNPITDKLRDVDPKILMDFTKSEHPQTIALILAHLKPEKSAQILESFTPEMQFEITR RMATLKSVPQEYIDEVARTLEKEIVAGATTGADIGGIRMMADILNRMNRASENAILTALEDMDPELAAGIRNLMFTFDDV LQLDDRGLQEVLREISSEDIGKALKLVDEGMREKVYRNMSKRGAEMLKEELDLMPPIRISEAEESQRKIVEIAKKMEAEG RVVLKRGDEQDEYI >Mature_333_residues ASLTNEEKAAILLLSLEEETASEVMKHLKPSEIRRLGKYMSRVSTISSETINSISREFCFLARERGRLISISEDVTKNIV IKAVGETEAESILSEVESIRTDDNPITDKLRDVDPKILMDFTKSEHPQTIALILAHLKPEKSAQILESFTPEMQFEITRR MATLKSVPQEYIDEVARTLEKEIVAGATTGADIGGIRMMADILNRMNRASENAILTALEDMDPELAAGIRNLMFTFDDVL QLDDRGLQEVLREISSEDIGKALKLVDEGMREKVYRNMSKRGAEMLKEELDLMPPIRISEAEESQRKIVEIAKKMEAEGR VVLKRGDEQDEYI
Specific function: One of the proteins that form a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of f
COG id: COG1536
COG function: function code N; Flagellar motor switch protein
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side. Bacterial flagellum basal body (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FliG family [H]
Homologues:
Organism=Escherichia coli, GI1788249, Length=334, Percent_Identity=33.2335329341317, Blast_Score=189, Evalue=2e-49,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000090 - InterPro: IPR023087 - InterPro: IPR011002 [H]
Pfam domain/function: PF01706 FliG_C [H]
EC number: NA
Molecular weight: Translated: 37732; Mature: 37601
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLTNEEKAAILLLSLEEETASEVMKHLKPSEIRRLGKYMSRVSTISSETINSISREFC CCCCCCCCCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLARERGRLISISEDVTKNIVIKAVGETEAESILSEVESIRTDDNPITDKLRDVDPKILM HHHHHCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHH DFTKSEHPQTIALILAHLKPEKSAQILESFTPEMQFEITRRMATLKSVPQEYIDEVARTL HHHCCCCCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKEIVAGATTGADIGGIRMMADILNRMNRASENAILTALEDMDPELAAGIRNLMFTFDDV HHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH LQLDDRGLQEVLREISSEDIGKALKLVDEGMREKVYRNMSKRGAEMLKEELDLMPPIRIS HHHCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC EAEESQRKIVEIAKKMEAEGRVVLKRGDEQDEYI CHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC >Mature Secondary Structure ASLTNEEKAAILLLSLEEETASEVMKHLKPSEIRRLGKYMSRVSTISSETINSISREFC CCCCCCCCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLARERGRLISISEDVTKNIVIKAVGETEAESILSEVESIRTDDNPITDKLRDVDPKILM HHHHHCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHH DFTKSEHPQTIALILAHLKPEKSAQILESFTPEMQFEITRRMATLKSVPQEYIDEVARTL HHHCCCCCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKEIVAGATTGADIGGIRMMADILNRMNRASENAILTALEDMDPELAAGIRNLMFTFDDV HHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH LQLDDRGLQEVLREISSEDIGKALKLVDEGMREKVYRNMSKRGAEMLKEELDLMPPIRIS HHHCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC EAEESQRKIVEIAKKMEAEGRVVLKRGDEQDEYI CHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10360571; 10440379 [H]