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The map label for this gene is 85858781

Identifier: 85858781

GI number: 85858781

Start: 972227

End: 973681

Strand: Direct

Name: 85858781

Synonym: SYN_02721

Alternate gene names: NA

Gene position: 972227-973681 (Clockwise)

Preceding gene: 85858780

Following gene: 85858782

Centisome position: 30.58

GC content: 47.56

Gene sequence:

>1455_bases
ATGCATCTACATTTTAAATCCGTTTTCCTTCATTCGATGATGCCTTTCCTTCGACGGTCCGGTAGATTAATACATGCCGC
ACTCAACCAGGCAAAAGGAAGATTCCGTTCGGCAAGCCTGCGGTTTAAGATCGCCTTATTTGTTGTCCTCCTTTTGACCG
CCACCTCCTTTATCCTGTGCATCACTACCGTAACCATCATGAACAATTACATATTGAACGAGATCACCAAACGGGGGGAA
TCGATAAGCAAGAGTATCGCTGCCTCCGCGGGCTACAACTTTCTCTCGAAAGACATTTTAGGCATGGATAACCTCGTCTT
CAAGGCCCAGTCTTCAAACAACGATGTGGAGTACGCCGCCATCGTTGCTCCCGACGGCAAGGTGGTTGTTCACAGCGATC
TGGCGATGCGTGGACAAACTTTACGAGATGATGAAGGTCGGTGGATCAGGTCGGGTGAGGAGGGGACAACCGTGAGAGAC
TTGACGAATTCTGCTGGCTCCATTTTCGAAATATCATGTCCAATCATTTTTATGAATAAAGTATTGGGGACAGTGCTGAT
CGGCATAAACAAATCAGTATTCCAGGAAGCACAGGCACAGGTTTATCGCAGAATAGTAACTGTTTTCGGCATTGTTCTCG
TATTCGGCGTTGTAGCCAGTACTTTTCTTGTATCTTTCTTGATCAAACCGATCCGGGAACTTTCAGCCGGGGTGGATGAG
CTCAAACAGGGTATATCAAAAAAGCCTCTCAAAATTTACTCTCATGATGAGCTCGGAAAACTGACGGCAAATTTCAATGA
GATGTCAAAGGTGATAGCGGACCAACAGGGTCAGATGAACCGATACACACGGGATCTTGAGAAGGCATACATATCAATAG
TCAAGGTAGCATCTGCAGCTATTGACGCCAGAGACTCGTATACCCGTGGACATTCGGACAGGGTCTCTGATTTTTCTCTT
CTTATCGGAAGGAAAATCGGGCTGCCCGGGGAAGAACTTGAAAATCTGAGAGTAGCCTGCTTGTTTCATGATATAGGAAA
AATCAAGACGCCCGACTCGATATTGCTCAAACCAGGCAAGCTAACCGCGTCAGAACACAAGGAGATGATGCGCCATCCCG
ATTATGGCGTAGCCATTCTGGATAAGGCCCCGACTCTTAGAAAGTACATTCCCGCCATCCGACATCACCATGAAAGGCAT
GATGGAAAAGGGTATCCCGATCGACTCCCGGGAGAGCATATTCCTCTCCTCGCGTCTATTATTGCAGTTGCTGACACATT
TGACGCGATGACCACAGACAGGCCATATCGGAAAGCGTTATCACACAAAGAGGCTTTACAGGAGATTATGCGGGTAGCCG
GAACACAATTGCACCCGGACCTGGTCGAAATATTTGTCGGAATCATGGAGAAAAGGGTGCGTGATACAGTGTGGTTTATC
GGGAGGACCGGATGA

Upstream 100 bases:

>100_bases
TCTGGAAGCAAGGCTCTGTCAATTTCAACATATATCTCTGAAATACCTTGCTCAATGTCTTCCATACCTCCGGGTGGTTT
ATCCGTAAATAATAGAAATC

Downstream 100 bases:

>100_bases
TGCCTTGCCTTCGCGCCGTCCTCAATTTTGTTGCTCTTGCTTTCCTTTTCGCCTCGATAGCTTCCTGTTCTCACTTTATG
TATCCCCCGACTCCATCCGA

Product: HD domain/HAMP domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MHLHFKSVFLHSMMPFLRRSGRLIHAALNQAKGRFRSASLRFKIALFVVLLLTATSFILCITTVTIMNNYILNEITKRGE
SISKSIAASAGYNFLSKDILGMDNLVFKAQSSNNDVEYAAIVAPDGKVVVHSDLAMRGQTLRDDEGRWIRSGEEGTTVRD
LTNSAGSIFEISCPIIFMNKVLGTVLIGINKSVFQEAQAQVYRRIVTVFGIVLVFGVVASTFLVSFLIKPIRELSAGVDE
LKQGISKKPLKIYSHDELGKLTANFNEMSKVIADQQGQMNRYTRDLEKAYISIVKVASAAIDARDSYTRGHSDRVSDFSL
LIGRKIGLPGEELENLRVACLFHDIGKIKTPDSILLKPGKLTASEHKEMMRHPDYGVAILDKAPTLRKYIPAIRHHHERH
DGKGYPDRLPGEHIPLLASIIAVADTFDAMTTDRPYRKALSHKEALQEIMRVAGTQLHPDLVEIFVGIMEKRVRDTVWFI
GRTG

Sequences:

>Translated_484_residues
MHLHFKSVFLHSMMPFLRRSGRLIHAALNQAKGRFRSASLRFKIALFVVLLLTATSFILCITTVTIMNNYILNEITKRGE
SISKSIAASAGYNFLSKDILGMDNLVFKAQSSNNDVEYAAIVAPDGKVVVHSDLAMRGQTLRDDEGRWIRSGEEGTTVRD
LTNSAGSIFEISCPIIFMNKVLGTVLIGINKSVFQEAQAQVYRRIVTVFGIVLVFGVVASTFLVSFLIKPIRELSAGVDE
LKQGISKKPLKIYSHDELGKLTANFNEMSKVIADQQGQMNRYTRDLEKAYISIVKVASAAIDARDSYTRGHSDRVSDFSL
LIGRKIGLPGEELENLRVACLFHDIGKIKTPDSILLKPGKLTASEHKEMMRHPDYGVAILDKAPTLRKYIPAIRHHHERH
DGKGYPDRLPGEHIPLLASIIAVADTFDAMTTDRPYRKALSHKEALQEIMRVAGTQLHPDLVEIFVGIMEKRVRDTVWFI
GRTG
>Mature_484_residues
MHLHFKSVFLHSMMPFLRRSGRLIHAALNQAKGRFRSASLRFKIALFVVLLLTATSFILCITTVTIMNNYILNEITKRGE
SISKSIAASAGYNFLSKDILGMDNLVFKAQSSNNDVEYAAIVAPDGKVVVHSDLAMRGQTLRDDEGRWIRSGEEGTTVRD
LTNSAGSIFEISCPIIFMNKVLGTVLIGINKSVFQEAQAQVYRRIVTVFGIVLVFGVVASTFLVSFLIKPIRELSAGVDE
LKQGISKKPLKIYSHDELGKLTANFNEMSKVIADQQGQMNRYTRDLEKAYISIVKVASAAIDARDSYTRGHSDRVSDFSL
LIGRKIGLPGEELENLRVACLFHDIGKIKTPDSILLKPGKLTASEHKEMMRHPDYGVAILDKAPTLRKYIPAIRHHHERH
DGKGYPDRLPGEHIPLLASIIAVADTFDAMTTDRPYRKALSHKEALQEIMRVAGTQLHPDLVEIFVGIMEKRVRDTVWFI
GRTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54015; Mature: 54015

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50885 HAMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLHFKSVFLHSMMPFLRRSGRLIHAALNQAKGRFRSASLRFKIALFVVLLLTATSFILC
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ITTVTIMNNYILNEITKRGESISKSIAASAGYNFLSKDILGMDNLVFKAQSSNNDVEYAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHEEEECCCCCCEEEEE
IVAPDGKVVVHSDLAMRGQTLRDDEGRWIRSGEEGTTVRDLTNSAGSIFEISCPIIFMNK
EECCCCCEEEECCHHHCCCCCCCCCCCEECCCCCCCHHHHHHCCCCCEEEECCCHHHHHH
VLGTVLIGINKSVFQEAQAQVYRRIVTVFGIVLVFGVVASTFLVSFLIKPIRELSAGVDE
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LKQGISKKPLKIYSHDELGKLTANFNEMSKVIADQQGQMNRYTRDLEKAYISIVKVASAA
HHHCCCCCCEEEECCCHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
IDARDSYTRGHSDRVSDFSLLIGRKIGLPGEELENLRVACLFHDIGKIKTPDSILLKPGK
HCCCHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCHHHEEHHHCCCCCCCCCEECCCC
LTASEHKEMMRHPDYGVAILDKAPTLRKYIPAIRHHHERHDGKGYPDRLPGEHIPLLASI
CCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
IAVADTFDAMTTDRPYRKALSHKEALQEIMRVAGTQLHPDLVEIFVGIMEKRVRDTVWFI
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEE
GRTG
ECCC
>Mature Secondary Structure
MHLHFKSVFLHSMMPFLRRSGRLIHAALNQAKGRFRSASLRFKIALFVVLLLTATSFILC
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ITTVTIMNNYILNEITKRGESISKSIAASAGYNFLSKDILGMDNLVFKAQSSNNDVEYAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHEEEECCCCCCEEEEE
IVAPDGKVVVHSDLAMRGQTLRDDEGRWIRSGEEGTTVRDLTNSAGSIFEISCPIIFMNK
EECCCCCEEEECCHHHCCCCCCCCCCCEECCCCCCCHHHHHHCCCCCEEEECCCHHHHHH
VLGTVLIGINKSVFQEAQAQVYRRIVTVFGIVLVFGVVASTFLVSFLIKPIRELSAGVDE
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LKQGISKKPLKIYSHDELGKLTANFNEMSKVIADQQGQMNRYTRDLEKAYISIVKVASAA
HHHCCCCCCEEEECCCHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
IDARDSYTRGHSDRVSDFSLLIGRKIGLPGEELENLRVACLFHDIGKIKTPDSILLKPGK
HCCCHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCHHHEEHHHCCCCCCCCCEECCCC
LTASEHKEMMRHPDYGVAILDKAPTLRKYIPAIRHHHERHDGKGYPDRLPGEHIPLLASI
CCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
IAVADTFDAMTTDRPYRKALSHKEALQEIMRVAGTQLHPDLVEIFVGIMEKRVRDTVWFI
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEE
GRTG
ECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]