Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

Click here to switch to the map view.

The map label for this gene is 85858757

Identifier: 85858757

GI number: 85858757

Start: 954920

End: 955966

Strand: Direct

Name: 85858757

Synonym: SYN_02742

Alternate gene names: NA

Gene position: 954920-955966 (Clockwise)

Preceding gene: 85858753

Following gene: 85858758

Centisome position: 30.04

GC content: 52.24

Gene sequence:

>1047_bases
ATGACCATAGAATCATGCGGTAACGGGGATTATAATGTCAATCAAAAAGAGGGAAGGAGAGAGAGAATGAACACAATTAT
GAAAGAGTACATGGAAAAGATATCCTTCGGCGACATGCAGGTCCACGATCATGTAGCCGTCATTCCTTTGATGATGACCA
ATGGCATCGGGCCGGAGTATTTCACACTGAAGGAGGCGCTGGCGAGCGATCTCCTCACCATTTCGGAACTTACCGAAGGC
GGGCACGTTCCGGAATTGAAAGTCCAAAACCGTGCAGAAAAACCTGTCCTGATCATTGATGGGGAAGAGTTGAGCGGGGC
CAAACAGAACCGGGTCCTGAACACAACCATCCTGCTCAAGGAGCAGTCCGAAACCGTCATTCCCGTGAGCTGCACCGAGC
AGGGACGATGGTCTTACCGGTCTGCCCATTTCGAAGAGTCGGGCCATATCATGTCGGCCAAACTGCGGCGGGTGAAAAAC
AGGTCGGTTATGGAATCACTGAAATTTTGCCGCGGGTTTCAATCGGATCAGGGTGCTGTCTGGGAAGAAATACAGGCACA
GTCGGAAAAAGCCAGGGTTTCATCGCCGACCCATGCCATGAAGGATATTCATGAGGCCCGAGAGAACGATCTGGATGCCT
ATCTTGAATACTTCACAATGGTTCCGGACCAGAAGGGGCTCATCGTCATCGTCAATGGGGATGTGGCGGGTCTCGATATG
GTTTCTCAGGCTGATACCTTCAAGGTCCTCTATTCCAAGCTCATCAAGAGCTATATCATGGATGCCATTCTGGAAAGGCC
GGCGAAAGGCAAGGCGCCCGGCTTGGACAAGGCAAAGGCATTCCTGGATGAGATAATAACGGCTGGCGAGCAGACTTACG
ATTCCGTGGGATATGGCCGTGACTTCCGTTACGAGGGGAAGAAACTGGTCGGCTCTGCTCTGGTCCACGAAGATGCAGTC
ATCCACATGGCCTTCTTCAGGACGACGCAGGCGGAAAAGTCGGGCTTTATGGCAGGGACATCCCGACGCAGGAATTTCCG
GCAGTGA

Upstream 100 bases:

>100_bases
GGAGGATCTGACCCAGCCGAACAATGCGCGCTTTTCCATCAGCCTTTTCCGTCATTTTTTCACCTTCAATAGGAAAAATC
GTGCGACTCACCCTTGTCGT

Downstream 100 bases:

>100_bases
GCCTATGGGCGTGAATGAAATAGTGTGGTGTCGGCATGAAAAAGATTTGTGACCAGTGCTATCGGGAATATTTTGAGGAA
GATGATCCGATCAGTCCAGC

Product: cytoplasmic protein

Products: NA

Alternate protein names: Tubulin-Like Protein

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MTIESCGNGDYNVNQKEGRRERMNTIMKEYMEKISFGDMQVHDHVAVIPLMMTNGIGPEYFTLKEALASDLLTISELTEG
GHVPELKVQNRAEKPVLIIDGEELSGAKQNRVLNTTILLKEQSETVIPVSCTEQGRWSYRSAHFEESGHIMSAKLRRVKN
RSVMESLKFCRGFQSDQGAVWEEIQAQSEKARVSSPTHAMKDIHEARENDLDAYLEYFTMVPDQKGLIVIVNGDVAGLDM
VSQADTFKVLYSKLIKSYIMDAILERPAKGKAPGLDKAKAFLDEIITAGEQTYDSVGYGRDFRYEGKKLVGSALVHEDAV
IHMAFFRTTQAEKSGFMAGTSRRRNFRQ

Sequences:

>Translated_348_residues
MTIESCGNGDYNVNQKEGRRERMNTIMKEYMEKISFGDMQVHDHVAVIPLMMTNGIGPEYFTLKEALASDLLTISELTEG
GHVPELKVQNRAEKPVLIIDGEELSGAKQNRVLNTTILLKEQSETVIPVSCTEQGRWSYRSAHFEESGHIMSAKLRRVKN
RSVMESLKFCRGFQSDQGAVWEEIQAQSEKARVSSPTHAMKDIHEARENDLDAYLEYFTMVPDQKGLIVIVNGDVAGLDM
VSQADTFKVLYSKLIKSYIMDAILERPAKGKAPGLDKAKAFLDEIITAGEQTYDSVGYGRDFRYEGKKLVGSALVHEDAV
IHMAFFRTTQAEKSGFMAGTSRRRNFRQ
>Mature_347_residues
TIESCGNGDYNVNQKEGRRERMNTIMKEYMEKISFGDMQVHDHVAVIPLMMTNGIGPEYFTLKEALASDLLTISELTEGG
HVPELKVQNRAEKPVLIIDGEELSGAKQNRVLNTTILLKEQSETVIPVSCTEQGRWSYRSAHFEESGHIMSAKLRRVKNR
SVMESLKFCRGFQSDQGAVWEEIQAQSEKARVSSPTHAMKDIHEARENDLDAYLEYFTMVPDQKGLIVIVNGDVAGLDMV
SQADTFKVLYSKLIKSYIMDAILERPAKGKAPGLDKAKAFLDEIITAGEQTYDSVGYGRDFRYEGKKLVGSALVHEDAVI
HMAFFRTTQAEKSGFMAGTSRRRNFRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39147; Mature: 39016

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIESCGNGDYNVNQKEGRRERMNTIMKEYMEKISFGDMQVHDHVAVIPLMMTNGIGPEY
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHCCCCCHH
FTLKEALASDLLTISELTEGGHVPELKVQNRAEKPVLIIDGEELSGAKQNRVLNTTILLK
HHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEEECCCCCCCHHCCEEEEEEEEE
EQSETVIPVSCTEQGRWSYRSAHFEESGHIMSAKLRRVKNRSVMESLKFCRGFQSDQGAV
ECCCEEEEEECCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
WEEIQAQSEKARVSSPTHAMKDIHEARENDLDAYLEYFTMVPDQKGLIVIVNGDVAGLDM
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCCCCCCHH
VSQADTFKVLYSKLIKSYIMDAILERPAKGKAPGLDKAKAFLDEIITAGEQTYDSVGYGR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCC
DFRYEGKKLVGSALVHEDAVIHMAFFRTTQAEKSGFMAGTSRRRNFRQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCC
>Mature Secondary Structure 
TIESCGNGDYNVNQKEGRRERMNTIMKEYMEKISFGDMQVHDHVAVIPLMMTNGIGPEY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHCCCCCHH
FTLKEALASDLLTISELTEGGHVPELKVQNRAEKPVLIIDGEELSGAKQNRVLNTTILLK
HHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEEECCCCCCCHHCCEEEEEEEEE
EQSETVIPVSCTEQGRWSYRSAHFEESGHIMSAKLRRVKNRSVMESLKFCRGFQSDQGAV
ECCCEEEEEECCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
WEEIQAQSEKARVSSPTHAMKDIHEARENDLDAYLEYFTMVPDQKGLIVIVNGDVAGLDM
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCCCCCCHH
VSQADTFKVLYSKLIKSYIMDAILERPAKGKAPGLDKAKAFLDEIITAGEQTYDSVGYGR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCC
DFRYEGKKLVGSALVHEDAVIHMAFFRTTQAEKSGFMAGTSRRRNFRQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA