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The map label for this gene is rmuC [H]

Identifier: 85858729

GI number: 85858729

Start: 908919

End: 910184

Strand: Direct

Name: rmuC [H]

Synonym: SYN_00197

Alternate gene names: 85858729

Gene position: 908919-910184 (Clockwise)

Preceding gene: 85858728

Following gene: 85858731

Centisome position: 28.59

GC content: 56.95

Gene sequence:

>1266_bases
ATGATAAACAATGCCCTTATTATTGTACTTGTTCTGGCGGCGATCGGGGTGATTCTTCAATTGGTTCTGATTTTCCGCAA
AGTTTCCATCAATGCGGGGGCTGTTGACGAGGCGCTTCAAATCATCGAACGGAATTATGAACGGACGGAGAGGGCCGTCA
GGGAAGAGATTTCCCGAAATCGGGAAGAATCGGCCCATGCCCAGCGGCAGTCCAGAGAGGAGCTGGCCGGCGCCCTGAGG
AGCGTTGGGGATACGCTTAATCAGCAGCTAATGGACCTGACCCGGACAAACGAGGGGAAACTTGACGCGATGAGAATCAC
GGTGGAGGAAAAGCTCCAGACACTTCAGATCGATAACGCCGCTCAGCTCGACAGGATGCGGTCGACCGTGGAGGAAAAAC
TGCAGGGGACGCTGGAGCAGCGTCTGGGCGAGTCTTTCCGGCAGGTCAGTGAGCGTCTCGAACAGGTCTATCGCGGATTG
GGCGAGATGCAGACCCTCGCTGCCGGCGTCGGTGATCTAAAAAAAGTGCTGAGTAATGTCAAAACCCGCGGCGTCTGGGG
AGAGGTGCAGCTGGGGGCGATGCTGGAACAAGTCCTCCATCCCGATCAGTACGCGACGAATCTGGCCACGAAGGAAGGGG
GAGAACGCGTCGAATTTGCCGTCAAGCTTCCCGGGAGAGGCGAGGAGCAGGATGAGGCGGTCTGGCTTCCCATCGATGCC
AAGTTCCCCATGGAGGATTATCTGCGCCTCCTGGATGCCCGGGAAAAAGTGGAGACGGAGAGCATGGAGATCGCCGCCAG
ACATCTGGATAACCGGATTCGCCAGTGCGCCAGGGATATCTGCGAGAAGTATCTCAACCCCCCGCAGACGACGGATTTCG
CCATCCTGTTCCTGCCGACGGAGGGACTTTTTGCCGAGGTGGCCCGCCGCACCGGTCTCACTGAAACTCTCCAGCGGGAA
TGGAGGGTGGTCATCGCCGGCCCCACGACTCTCTGGTCGATTCTGAACAGTCTGCAGATGGGATTTAGAACCCTGGCAAT
TCAGAAACGGTCCAGCGAAGTCTGGAATCTCCTGGCTGCCGTGAAGACGGAATGGACCAGGTACGGTGAAATCCTGAACA
AGGTTCAGAAGAAGCTCCATGAGGCATCGGATGCCCTGGACAAGGCACAGACCCGGACCCGGGTCATCGGAAAGAAGCTG
AAGGATGTGCAGGAGCTTCCGGAAGGTCAGTCTGATGTTTTGCTGAAGGTCGATACGGAGGTATAA

Upstream 100 bases:

>100_bases
GGTGCGCCCTGACCAGGATTTCTTCGCGGCAGCTCAGGGATGTCAGGGGAATAGGCTGCCCATGGCAATAACATACTGAA
AGACATCAGGAATTGAGCTC

Downstream 100 bases:

>100_bases
AGCCGACTCCCAAGATCCGGCTGGTCAGCGGAACGTCAGCTCAGAGGGCGTTGAGGCGCACCTGGTCATGAGACATGTGG
AACCGTTACAAGAATCCGCG

Product: rmuC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MINNALIIVLVLAAIGVILQLVLIFRKVSINAGAVDEALQIIERNYERTERAVREEISRNREESAHAQRQSREELAGALR
SVGDTLNQQLMDLTRTNEGKLDAMRITVEEKLQTLQIDNAAQLDRMRSTVEEKLQGTLEQRLGESFRQVSERLEQVYRGL
GEMQTLAAGVGDLKKVLSNVKTRGVWGEVQLGAMLEQVLHPDQYATNLATKEGGERVEFAVKLPGRGEEQDEAVWLPIDA
KFPMEDYLRLLDAREKVETESMEIAARHLDNRIRQCARDICEKYLNPPQTTDFAILFLPTEGLFAEVARRTGLTETLQRE
WRVVIAGPTTLWSILNSLQMGFRTLAIQKRSSEVWNLLAAVKTEWTRYGEILNKVQKKLHEASDALDKAQTRTRVIGKKL
KDVQELPEGQSDVLLKVDTEV

Sequences:

>Translated_421_residues
MINNALIIVLVLAAIGVILQLVLIFRKVSINAGAVDEALQIIERNYERTERAVREEISRNREESAHAQRQSREELAGALR
SVGDTLNQQLMDLTRTNEGKLDAMRITVEEKLQTLQIDNAAQLDRMRSTVEEKLQGTLEQRLGESFRQVSERLEQVYRGL
GEMQTLAAGVGDLKKVLSNVKTRGVWGEVQLGAMLEQVLHPDQYATNLATKEGGERVEFAVKLPGRGEEQDEAVWLPIDA
KFPMEDYLRLLDAREKVETESMEIAARHLDNRIRQCARDICEKYLNPPQTTDFAILFLPTEGLFAEVARRTGLTETLQRE
WRVVIAGPTTLWSILNSLQMGFRTLAIQKRSSEVWNLLAAVKTEWTRYGEILNKVQKKLHEASDALDKAQTRTRVIGKKL
KDVQELPEGQSDVLLKVDTEV
>Mature_421_residues
MINNALIIVLVLAAIGVILQLVLIFRKVSINAGAVDEALQIIERNYERTERAVREEISRNREESAHAQRQSREELAGALR
SVGDTLNQQLMDLTRTNEGKLDAMRITVEEKLQTLQIDNAAQLDRMRSTVEEKLQGTLEQRLGESFRQVSERLEQVYRGL
GEMQTLAAGVGDLKKVLSNVKTRGVWGEVQLGAMLEQVLHPDQYATNLATKEGGERVEFAVKLPGRGEEQDEAVWLPIDA
KFPMEDYLRLLDAREKVETESMEIAARHLDNRIRQCARDICEKYLNPPQTTDFAILFLPTEGLFAEVARRTGLTETLQRE
WRVVIAGPTTLWSILNSLQMGFRTLAIQKRSSEVWNLLAAVKTEWTRYGEILNKVQKKLHEASDALDKAQTRTRVIGKKL
KDVQELPEGQSDVLLKVDTEV

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 47694; Mature: 47694

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINNALIIVLVLAAIGVILQLVLIFRKVSINAGAVDEALQIIERNYERTERAVREEISRN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
REESAHAQRQSREELAGALRSVGDTLNQQLMDLTRTNEGKLDAMRITVEEKLQTLQIDNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEHHHHHHHHCCCCH
AQLDRMRSTVEEKLQGTLEQRLGESFRQVSERLEQVYRGLGEMQTLAAGVGDLKKVLSNV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTRGVWGEVQLGAMLEQVLHPDQYATNLATKEGGERVEFAVKLPGRGEEQDEAVWLPIDA
HHCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEEECC
KFPMEDYLRLLDAREKVETESMEIAARHLDNRIRQCARDICEKYLNPPQTTDFAILFLPT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
EGLFAEVARRTGLTETLQREWRVVIAGPTTLWSILNSLQMGFRTLAIQKRSSEVWNLLAA
CHHHHHHHHHCCCHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKTEWTRYGEILNKVQKKLHEASDALDKAQTRTRVIGKKLKDVQELPEGQSDVLLKVDTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
V
C
>Mature Secondary Structure
MINNALIIVLVLAAIGVILQLVLIFRKVSINAGAVDEALQIIERNYERTERAVREEISRN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
REESAHAQRQSREELAGALRSVGDTLNQQLMDLTRTNEGKLDAMRITVEEKLQTLQIDNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEHHHHHHHHCCCCH
AQLDRMRSTVEEKLQGTLEQRLGESFRQVSERLEQVYRGLGEMQTLAAGVGDLKKVLSNV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTRGVWGEVQLGAMLEQVLHPDQYATNLATKEGGERVEFAVKLPGRGEEQDEAVWLPIDA
HHCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEEECC
KFPMEDYLRLLDAREKVETESMEIAARHLDNRIRQCARDICEKYLNPPQTTDFAILFLPT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
EGLFAEVARRTGLTETLQREWRVVIAGPTTLWSILNSLQMGFRTLAIQKRSSEVWNLLAA
CHHHHHHHHHCCCHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKTEWTRYGEILNKVQKKLHEASDALDKAQTRTRVIGKKLKDVQELPEGQSDVLLKVDTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
V
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]