| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858664
Identifier: 85858664
GI number: 85858664
Start: 841121
End: 841468
Strand: Direct
Name: 85858664
Synonym: SYN_02913
Alternate gene names: NA
Gene position: 841121-841468 (Clockwise)
Preceding gene: 85858663
Following gene: 85858666
Centisome position: 26.46
GC content: 39.94
Gene sequence:
>348_bases ATGGTCAATTGTCTTCAAGATGTTTTATCACCTGATGATCAGTGTGTATGTGTTTTTACACAGCAGGAGGGATCTCAGAA GAACCTTGTTCTCAATCCTGACGGGATCTCAAAAAGTGGGATATGGAAACTGGATCAGATAAGAATGATGTGGGTGAACA AGGTCGTTGTCTATTACAGGCATGACGGGATAAATGAAATAATTACCGGCCATTGTGAAGGTATCAGCCCTACGATTTTT CGTGATCATTATTGTATAGAGTTTAAAGTAACAAATATTGATCAAACGCTGAATGGCTGGGAAGATTTCTGTAAGGAAGG CACAGAGCCCATACAGTATTACCCGTAA
Upstream 100 bases:
>100_bases AATTTTCAAATACAAAAAAGGATGATAAATAAAAATAATGTTTTCTGCAGTACAGAAACAAACGCTGTAAGATGTCATCT TTAAAAAGGAATGTCCGGCG
Downstream 100 bases:
>100_bases AAATGATCAGGGTCGAAATCAGAAAAAATATTTGATGTGTTTCTTCTTTTATTCATGAGAAATGTCGAATGAAAAATCAG AAATGGACGCCCGGTCGACT
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MVNCLQDVLSPDDQCVCVFTQQEGSQKNLVLNPDGISKSGIWKLDQIRMMWVNKVVVYYRHDGINEIITGHCEGISPTIF RDHYCIEFKVTNIDQTLNGWEDFCKEGTEPIQYYP
Sequences:
>Translated_115_residues MVNCLQDVLSPDDQCVCVFTQQEGSQKNLVLNPDGISKSGIWKLDQIRMMWVNKVVVYYRHDGINEIITGHCEGISPTIF RDHYCIEFKVTNIDQTLNGWEDFCKEGTEPIQYYP >Mature_115_residues MVNCLQDVLSPDDQCVCVFTQQEGSQKNLVLNPDGISKSGIWKLDQIRMMWVNKVVVYYRHDGINEIITGHCEGISPTIF RDHYCIEFKVTNIDQTLNGWEDFCKEGTEPIQYYP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13305; Mature: 13305
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNCLQDVLSPDDQCVCVFTQQEGSQKNLVLNPDGISKSGIWKLDQIRMMWVNKVVVYYR CCCCHHHHCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCEEHHHHHHEEECEEEEEEE HDGINEIITGHCEGISPTIFRDHYCIEFKVTNIDQTLNGWEDFCKEGTEPIQYYP CCCCCHHEECCCCCCCCCEECCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MVNCLQDVLSPDDQCVCVFTQQEGSQKNLVLNPDGISKSGIWKLDQIRMMWVNKVVVYYR CCCCHHHHCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCEEHHHHHHEEECEEEEEEE HDGINEIITGHCEGISPTIFRDHYCIEFKVTNIDQTLNGWEDFCKEGTEPIQYYP CCCCCHHEECCCCCCCCCEECCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA