| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858600
Identifier: 85858600
GI number: 85858600
Start: 765810
End: 766580
Strand: Direct
Name: 85858600
Synonym: SYN_02957
Alternate gene names: NA
Gene position: 765810-766580 (Clockwise)
Preceding gene: 85858599
Following gene: 85858601
Centisome position: 24.09
GC content: 52.14
Gene sequence:
>771_bases TTGATGTTCATGGATGTTCCTTTTGGCAGACCGGTGTTTGAATATGCTTTCCGGGACTTTTTGACAACAAAGGAGGAGAT CATGAAGAAGACCATGGAAATTGTCATATCGATCGTAGGTCTATTTTTGTTGGCGATTCCCGTCGGTTTTACGGCGGACA ATTCCTTCTCCGGGTTTCTTGGCGATCCGGCCAGGTATGACCTCCTGAAGCCCGGACCCAAAGACGGGGCCAGACTGCGC TGGCTGAAAGAGGGGGTAGATATAAAGAAATACAACAAGTTCATGGTGGACAGCGTTATCTTCTACCTTGCCGATTCATC CGAGTACAAAGGCATCGATCCCCAGGAGATGAAGGAACTGGCCGATTCCTTCAACAGGGAACTCGTGGCGGCCTTTAAGG ACAAGTGGCCGATCGTTGCCGAGCCTGGTCCCGACGTCGTCCGTATCCGTATTGCCATAACGAATATCAAGCCGAGTAAG CCGGGTGTCAGTGCCGTTACCTCGATCATACCCATTGGATTGGGAGTCAGCCTCGTCAAGAAAGGCGCCACGGGTGGCTG GTCCGGCAGCGGGGAAACAGGCATCGAGTTAATGACCATGGATTCCATGACGGACGAAGTGATCGCGATGGCGGTGGATC GTCGAAACGCCGAGTTCGAACAGAGGTTTTCGAAATGGGGTTCGGCCAACGATGCCTTCAAGTTCTGGTCCGAGAAAATC GTCTCGTTCATTGACGATGCGCATGGAATCAAGAGGGAGTCCGGGAAATAA
Upstream 100 bases:
>100_bases CAAACCCGGACAGCACAGCAAAATGAAAGCAATAAAGTAAACGAAGCCGCTCTCTCCCTTTCCTTTCCAAATGTTCAGTT CAGCAATATCGCAGTAAAGC
Downstream 100 bases:
>100_bases GCCACTCATTTTTGCGCGGCACTTAAGGTCTTGATAATCAAGGGAAGTAATTTTGCCGAACTTCCGGCATGGTAGTTTAT ATCCACGGGCCGCGATGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MMFMDVPFGRPVFEYAFRDFLTTKEEIMKKTMEIVISIVGLFLLAIPVGFTADNSFSGFLGDPARYDLLKPGPKDGARLR WLKEGVDIKKYNKFMVDSVIFYLADSSEYKGIDPQEMKELADSFNRELVAAFKDKWPIVAEPGPDVVRIRIAITNIKPSK PGVSAVTSIIPIGLGVSLVKKGATGGWSGSGETGIELMTMDSMTDEVIAMAVDRRNAEFEQRFSKWGSANDAFKFWSEKI VSFIDDAHGIKRESGK
Sequences:
>Translated_256_residues MMFMDVPFGRPVFEYAFRDFLTTKEEIMKKTMEIVISIVGLFLLAIPVGFTADNSFSGFLGDPARYDLLKPGPKDGARLR WLKEGVDIKKYNKFMVDSVIFYLADSSEYKGIDPQEMKELADSFNRELVAAFKDKWPIVAEPGPDVVRIRIAITNIKPSK PGVSAVTSIIPIGLGVSLVKKGATGGWSGSGETGIELMTMDSMTDEVIAMAVDRRNAEFEQRFSKWGSANDAFKFWSEKI VSFIDDAHGIKRESGK >Mature_256_residues MMFMDVPFGRPVFEYAFRDFLTTKEEIMKKTMEIVISIVGLFLLAIPVGFTADNSFSGFLGDPARYDLLKPGPKDGARLR WLKEGVDIKKYNKFMVDSVIFYLADSSEYKGIDPQEMKELADSFNRELVAAFKDKWPIVAEPGPDVVRIRIAITNIKPSK PGVSAVTSIIPIGLGVSLVKKGATGGWSGSGETGIELMTMDSMTDEVIAMAVDRRNAEFEQRFSKWGSANDAFKFWSEKI VSFIDDAHGIKRESGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28502; Mature: 28502
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMFMDVPFGRPVFEYAFRDFLTTKEEIMKKTMEIVISIVGLFLLAIPVGFTADNSFSGFL CEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GDPARYDLLKPGPKDGARLRWLKEGVDIKKYNKFMVDSVIFYLADSSEYKGIDPQEMKEL CCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHH ADSFNRELVAAFKDKWPIVAEPGPDVVRIRIAITNIKPSKPGVSAVTSIIPIGLGVSLVK HHHHHHHHHHHHHCCCCEEECCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHCCHHHHH KGATGGWSGSGETGIELMTMDSMTDEVIAMAVDRRNAEFEQRFSKWGSANDAFKFWSEKI CCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHH VSFIDDAHGIKRESGK HHHHHHHCCCCCCCCC >Mature Secondary Structure MMFMDVPFGRPVFEYAFRDFLTTKEEIMKKTMEIVISIVGLFLLAIPVGFTADNSFSGFL CEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GDPARYDLLKPGPKDGARLRWLKEGVDIKKYNKFMVDSVIFYLADSSEYKGIDPQEMKEL CCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHH ADSFNRELVAAFKDKWPIVAEPGPDVVRIRIAITNIKPSKPGVSAVTSIIPIGLGVSLVK HHHHHHHHHHHHHCCCCEEECCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHCCHHHHH KGATGGWSGSGETGIELMTMDSMTDEVIAMAVDRRNAEFEQRFSKWGSANDAFKFWSEKI CCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHH VSFIDDAHGIKRESGK HHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA