Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is glmM

Identifier: 85858598

GI number: 85858598

Start: 762886

End: 764235

Strand: Direct

Name: glmM

Synonym: SYN_02959

Alternate gene names: 85858598

Gene position: 762886-764235 (Clockwise)

Preceding gene: 85858597

Following gene: 85858599

Centisome position: 24.0

GC content: 52.74

Gene sequence:

>1350_bases
ATGGGTAAACTTTTCGGAACGGATGGCGTCAGAGGCGTTGCCAATGAATATCCCATGACGGCGGAAATGGCCTTGAACAT
TGGAAGGGCGACCGCGTTCATGTTCAAACGCGAGGGCCATAATCCCAAAATTCTTATCGGAAAAGATACTCGGCTTTCCG
GCTACATGCTTGAAAATGCCCTGGTTTCCGGCATCTGCTCTATGGGTGTCAATGCGATTCTCGTCGGCGTCATTCCGACG
CCGGGCATTGCCTATCTGACCAGCAGCATGAGGGCTGATGCCGGGATCGTCATCTCCGCATCCCACAATCCTTTTCAGGA
CAACGGCATAAAAATCTTTTCCGGTGACGGTTTCAAACTTCCTGATGAGACGGAACTGGCCATTGAAGATATGATTCTGA
ACAATAAAATGGATCAACTTCTGCCCAGGGTAAGCGAATTGGGCAAGGCCTATCGCATGGATGACGCCCGGGGGCGTTAT
ATCGTGTTTCTAAAGCATACCTTTCCCCGGGAACTTTCCCTGGAAGGCGTCAAGGTCGTCCTGGACTGCGCCAATGGGGC
GACTTACCGGGTGGCGCCGGAAACATTCTACGAACTGGGCGCGGAAGTCACAACCCTGTTCGACGATCCCGATGGAAGAA
ATATCAATGTGAATTGCGGCTCTCAATACCCGGAAACTCTGGCCGCTGAAGTTTTGAAACAGGGCGCTGACGTCGGTTTC
GCTTTTGACGGCGACGGCGACCGGCTGATTGCCGTCGATGAAAAAGGCAACGTCCTGACGGGAGATCAGGTTATTGCGAT
CTGCGCCAATGTGATGAAAAAGGAAGGGAAGCTGACCAAAAATCTCGTTGTCAGAACCGTCATGAGCAATATCGGCCTTT
CCGTCGCTCTCGAAAAGCTTGACATCAACTCCATCATGACAAAGGTGGGCGACCGGTATGTTCTGGAGGAAATGCAGGCC
AACGGCAGTTCCATCGGCGGCGAAGATTCCGGGCATGTGATCTTTTTACAGCATCACACGACAGGGGACGGGATTGTCAC
GGCGATCCAGGTTATCGCGGCAATGAAAAAAGAAGGGAAACCCCTGTCCGATCTGGCGAAAATCATGGACGTTTTCCCCC
AGACCCTCATCAATGTGGATACCAAGTCACGACCGGAAATATCCACGGTTCCGGAACTTGTTGCCGTCATCAAATCGGTG
GAAGAAAAGTTGGGAACGAGCGGCCGGGTCCTTGTCCGGTATTCGGGGACGCAGAACATGTGCCGCGTCATGGTGGAAGG
CCCCACCCAGGAAGAAACCCTCAAATATTGCAAACAGATCGCCGATGTGGTGAAGGAAGAGCTCGGCTGA

Upstream 100 bases:

>100_bases
AGGATTGTCGATACCTTTTGCCAGAAGACACAAGAGGTTTTTCCGAGATTGAAGCTGTTCGGTAAATAAATTCTTACTTA
TTGATCATGGAGGAATTTTA

Downstream 100 bases:

>100_bases
TCCTTTAGAGAAAGCAGGGAGACAGCATGTCATTCAAGGTCATCGTCACACGTGATTTCGAACACATGAGCGAGGTCGCC
GCCGGGTTGGTCATTGAAAA

Product: phosphoglucosamine mutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 448

Protein sequence:

>449_residues
MGKLFGTDGVRGVANEYPMTAEMALNIGRATAFMFKREGHNPKILIGKDTRLSGYMLENALVSGICSMGVNAILVGVIPT
PGIAYLTSSMRADAGIVISASHNPFQDNGIKIFSGDGFKLPDETELAIEDMILNNKMDQLLPRVSELGKAYRMDDARGRY
IVFLKHTFPRELSLEGVKVVLDCANGATYRVAPETFYELGAEVTTLFDDPDGRNINVNCGSQYPETLAAEVLKQGADVGF
AFDGDGDRLIAVDEKGNVLTGDQVIAICANVMKKEGKLTKNLVVRTVMSNIGLSVALEKLDINSIMTKVGDRYVLEEMQA
NGSSIGGEDSGHVIFLQHHTTGDGIVTAIQVIAAMKKEGKPLSDLAKIMDVFPQTLINVDTKSRPEISTVPELVAVIKSV
EEKLGTSGRVLVRYSGTQNMCRVMVEGPTQEETLKYCKQIADVVKEELG

Sequences:

>Translated_449_residues
MGKLFGTDGVRGVANEYPMTAEMALNIGRATAFMFKREGHNPKILIGKDTRLSGYMLENALVSGICSMGVNAILVGVIPT
PGIAYLTSSMRADAGIVISASHNPFQDNGIKIFSGDGFKLPDETELAIEDMILNNKMDQLLPRVSELGKAYRMDDARGRY
IVFLKHTFPRELSLEGVKVVLDCANGATYRVAPETFYELGAEVTTLFDDPDGRNINVNCGSQYPETLAAEVLKQGADVGF
AFDGDGDRLIAVDEKGNVLTGDQVIAICANVMKKEGKLTKNLVVRTVMSNIGLSVALEKLDINSIMTKVGDRYVLEEMQA
NGSSIGGEDSGHVIFLQHHTTGDGIVTAIQVIAAMKKEGKPLSDLAKIMDVFPQTLINVDTKSRPEISTVPELVAVIKSV
EEKLGTSGRVLVRYSGTQNMCRVMVEGPTQEETLKYCKQIADVVKEELG
>Mature_448_residues
GKLFGTDGVRGVANEYPMTAEMALNIGRATAFMFKREGHNPKILIGKDTRLSGYMLENALVSGICSMGVNAILVGVIPTP
GIAYLTSSMRADAGIVISASHNPFQDNGIKIFSGDGFKLPDETELAIEDMILNNKMDQLLPRVSELGKAYRMDDARGRYI
VFLKHTFPRELSLEGVKVVLDCANGATYRVAPETFYELGAEVTTLFDDPDGRNINVNCGSQYPETLAAEVLKQGADVGFA
FDGDGDRLIAVDEKGNVLTGDQVIAICANVMKKEGKLTKNLVVRTVMSNIGLSVALEKLDINSIMTKVGDRYVLEEMQAN
GSSIGGEDSGHVIFLQHHTTGDGIVTAIQVIAAMKKEGKPLSDLAKIMDVFPQTLINVDTKSRPEISTVPELVAVIKSVE
EKLGTSGRVLVRYSGTQNMCRVMVEGPTQEETLKYCKQIADVVKEELG

Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate

COG id: COG1109

COG function: function code G; Phosphomannomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphohexose mutase family

Homologues:

Organism=Escherichia coli, GI1789566, Length=446, Percent_Identity=50.8968609865471, Blast_Score=395, Evalue=1e-111,
Organism=Escherichia coli, GI1788361, Length=448, Percent_Identity=27.6785714285714, Blast_Score=107, Evalue=2e-24,
Organism=Drosophila melanogaster, GI17864244, Length=360, Percent_Identity=25, Blast_Score=76, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLMM_SYNAS (Q2LRC1)

Other databases:

- EMBL:   CP000252
- RefSeq:   YP_460800.1
- HSSP:   Q9P4V2
- ProteinModelPortal:   Q2LRC1
- SMR:   Q2LRC1
- STRING:   Q2LRC1
- GeneID:   3885238
- GenomeReviews:   CP000252_GR
- KEGG:   sat:SYN_02959
- NMPDR:   fig|56780.10.peg.743
- eggNOG:   COG1109
- HOGENOM:   HBG644964
- OMA:   VHDRYIE
- PhylomeDB:   Q2LRC1
- ProtClustDB:   PRK14314
- BioCyc:   SACI56780:SYN_02959-MONOMER
- HAMAP:   MF_01554_B
- InterPro:   IPR005844
- InterPro:   IPR016055
- InterPro:   IPR005845
- InterPro:   IPR005846
- InterPro:   IPR005843
- InterPro:   IPR016066
- InterPro:   IPR005841
- InterPro:   IPR006352
- Gene3D:   G3DSA:3.40.120.10
- PRINTS:   PR00509
- TIGRFAMs:   TIGR01455

Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV; SSF53738 A-D-PHexomutase_a/b/a-I/II/III

EC number: =5.4.2.10

Molecular weight: Translated: 48620; Mature: 48488

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS00710 PGM_PMM

Important sites: ACT_SITE 101-101

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKLFGTDGVRGVANEYPMTAEMALNIGRATAFMFKREGHNPKILIGKDTRLSGYMLENA
CCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHEEEEEECCCCCEEEEECCCCCCHHHHHHH
LVSGICSMGVNAILVGVIPTPGIAYLTSSMRADAGIVISASHNPFQDNGIKIFSGDGFKL
HHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCCEEEECCCCCCCCCCEEEECCCCCCC
PDETELAIEDMILNNKMDQLLPRVSELGKAYRMDDARGRYIVFLKHTFPRELSLEGVKVV
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEE
LDCANGATYRVAPETFYELGAEVTTLFDDPDGRNINVNCGSQYPETLAAEVLKQGADVGF
EECCCCCEEEECHHHHHHCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHCCCCEEE
AFDGDGDRLIAVDEKGNVLTGDQVIAICANVMKKEGKLTKNLVVRTVMSNIGLSVALEKL
EEECCCCEEEEECCCCCEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEHHH
DINSIMTKVGDRYVLEEMQANGSSIGGEDSGHVIFLQHHTTGDGIVTAIQVIAAMKKEGK
HHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCC
PLSDLAKIMDVFPQTLINVDTKSRPEISTVPELVAVIKSVEEKLGTSGRVLVRYSGTQNM
CHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCE
CRVMVEGPTQEETLKYCKQIADVVKEELG
EEEEECCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GKLFGTDGVRGVANEYPMTAEMALNIGRATAFMFKREGHNPKILIGKDTRLSGYMLENA
CCCCCCCCCCCCCCCCCCCHHHHHHHCHHHEEEEEECCCCCEEEEECCCCCCHHHHHHH
LVSGICSMGVNAILVGVIPTPGIAYLTSSMRADAGIVISASHNPFQDNGIKIFSGDGFKL
HHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCCEEEECCCCCCCCCCEEEECCCCCCC
PDETELAIEDMILNNKMDQLLPRVSELGKAYRMDDARGRYIVFLKHTFPRELSLEGVKVV
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEE
LDCANGATYRVAPETFYELGAEVTTLFDDPDGRNINVNCGSQYPETLAAEVLKQGADVGF
EECCCCCEEEECHHHHHHCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHCCCCEEE
AFDGDGDRLIAVDEKGNVLTGDQVIAICANVMKKEGKLTKNLVVRTVMSNIGLSVALEKL
EEECCCCEEEEECCCCCEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEHHH
DINSIMTKVGDRYVLEEMQANGSSIGGEDSGHVIFLQHHTTGDGIVTAIQVIAAMKKEGK
HHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCC
PLSDLAKIMDVFPQTLINVDTKSRPEISTVPELVAVIKSVEEKLGTSGRVLVRYSGTQNM
CHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCE
CRVMVEGPTQEETLKYCKQIADVVKEELG
EEEEECCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA