| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is glmM
Identifier: 85858598
GI number: 85858598
Start: 762886
End: 764235
Strand: Direct
Name: glmM
Synonym: SYN_02959
Alternate gene names: 85858598
Gene position: 762886-764235 (Clockwise)
Preceding gene: 85858597
Following gene: 85858599
Centisome position: 24.0
GC content: 52.74
Gene sequence:
>1350_bases ATGGGTAAACTTTTCGGAACGGATGGCGTCAGAGGCGTTGCCAATGAATATCCCATGACGGCGGAAATGGCCTTGAACAT TGGAAGGGCGACCGCGTTCATGTTCAAACGCGAGGGCCATAATCCCAAAATTCTTATCGGAAAAGATACTCGGCTTTCCG GCTACATGCTTGAAAATGCCCTGGTTTCCGGCATCTGCTCTATGGGTGTCAATGCGATTCTCGTCGGCGTCATTCCGACG CCGGGCATTGCCTATCTGACCAGCAGCATGAGGGCTGATGCCGGGATCGTCATCTCCGCATCCCACAATCCTTTTCAGGA CAACGGCATAAAAATCTTTTCCGGTGACGGTTTCAAACTTCCTGATGAGACGGAACTGGCCATTGAAGATATGATTCTGA ACAATAAAATGGATCAACTTCTGCCCAGGGTAAGCGAATTGGGCAAGGCCTATCGCATGGATGACGCCCGGGGGCGTTAT ATCGTGTTTCTAAAGCATACCTTTCCCCGGGAACTTTCCCTGGAAGGCGTCAAGGTCGTCCTGGACTGCGCCAATGGGGC GACTTACCGGGTGGCGCCGGAAACATTCTACGAACTGGGCGCGGAAGTCACAACCCTGTTCGACGATCCCGATGGAAGAA ATATCAATGTGAATTGCGGCTCTCAATACCCGGAAACTCTGGCCGCTGAAGTTTTGAAACAGGGCGCTGACGTCGGTTTC GCTTTTGACGGCGACGGCGACCGGCTGATTGCCGTCGATGAAAAAGGCAACGTCCTGACGGGAGATCAGGTTATTGCGAT CTGCGCCAATGTGATGAAAAAGGAAGGGAAGCTGACCAAAAATCTCGTTGTCAGAACCGTCATGAGCAATATCGGCCTTT CCGTCGCTCTCGAAAAGCTTGACATCAACTCCATCATGACAAAGGTGGGCGACCGGTATGTTCTGGAGGAAATGCAGGCC AACGGCAGTTCCATCGGCGGCGAAGATTCCGGGCATGTGATCTTTTTACAGCATCACACGACAGGGGACGGGATTGTCAC GGCGATCCAGGTTATCGCGGCAATGAAAAAAGAAGGGAAACCCCTGTCCGATCTGGCGAAAATCATGGACGTTTTCCCCC AGACCCTCATCAATGTGGATACCAAGTCACGACCGGAAATATCCACGGTTCCGGAACTTGTTGCCGTCATCAAATCGGTG GAAGAAAAGTTGGGAACGAGCGGCCGGGTCCTTGTCCGGTATTCGGGGACGCAGAACATGTGCCGCGTCATGGTGGAAGG CCCCACCCAGGAAGAAACCCTCAAATATTGCAAACAGATCGCCGATGTGGTGAAGGAAGAGCTCGGCTGA
Upstream 100 bases:
>100_bases AGGATTGTCGATACCTTTTGCCAGAAGACACAAGAGGTTTTTCCGAGATTGAAGCTGTTCGGTAAATAAATTCTTACTTA TTGATCATGGAGGAATTTTA
Downstream 100 bases:
>100_bases TCCTTTAGAGAAAGCAGGGAGACAGCATGTCATTCAAGGTCATCGTCACACGTGATTTCGAACACATGAGCGAGGTCGCC GCCGGGTTGGTCATTGAAAA
Product: phosphoglucosamine mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MGKLFGTDGVRGVANEYPMTAEMALNIGRATAFMFKREGHNPKILIGKDTRLSGYMLENALVSGICSMGVNAILVGVIPT PGIAYLTSSMRADAGIVISASHNPFQDNGIKIFSGDGFKLPDETELAIEDMILNNKMDQLLPRVSELGKAYRMDDARGRY IVFLKHTFPRELSLEGVKVVLDCANGATYRVAPETFYELGAEVTTLFDDPDGRNINVNCGSQYPETLAAEVLKQGADVGF AFDGDGDRLIAVDEKGNVLTGDQVIAICANVMKKEGKLTKNLVVRTVMSNIGLSVALEKLDINSIMTKVGDRYVLEEMQA NGSSIGGEDSGHVIFLQHHTTGDGIVTAIQVIAAMKKEGKPLSDLAKIMDVFPQTLINVDTKSRPEISTVPELVAVIKSV EEKLGTSGRVLVRYSGTQNMCRVMVEGPTQEETLKYCKQIADVVKEELG
Sequences:
>Translated_449_residues MGKLFGTDGVRGVANEYPMTAEMALNIGRATAFMFKREGHNPKILIGKDTRLSGYMLENALVSGICSMGVNAILVGVIPT PGIAYLTSSMRADAGIVISASHNPFQDNGIKIFSGDGFKLPDETELAIEDMILNNKMDQLLPRVSELGKAYRMDDARGRY IVFLKHTFPRELSLEGVKVVLDCANGATYRVAPETFYELGAEVTTLFDDPDGRNINVNCGSQYPETLAAEVLKQGADVGF AFDGDGDRLIAVDEKGNVLTGDQVIAICANVMKKEGKLTKNLVVRTVMSNIGLSVALEKLDINSIMTKVGDRYVLEEMQA NGSSIGGEDSGHVIFLQHHTTGDGIVTAIQVIAAMKKEGKPLSDLAKIMDVFPQTLINVDTKSRPEISTVPELVAVIKSV EEKLGTSGRVLVRYSGTQNMCRVMVEGPTQEETLKYCKQIADVVKEELG >Mature_448_residues GKLFGTDGVRGVANEYPMTAEMALNIGRATAFMFKREGHNPKILIGKDTRLSGYMLENALVSGICSMGVNAILVGVIPTP GIAYLTSSMRADAGIVISASHNPFQDNGIKIFSGDGFKLPDETELAIEDMILNNKMDQLLPRVSELGKAYRMDDARGRYI VFLKHTFPRELSLEGVKVVLDCANGATYRVAPETFYELGAEVTTLFDDPDGRNINVNCGSQYPETLAAEVLKQGADVGFA FDGDGDRLIAVDEKGNVLTGDQVIAICANVMKKEGKLTKNLVVRTVMSNIGLSVALEKLDINSIMTKVGDRYVLEEMQAN GSSIGGEDSGHVIFLQHHTTGDGIVTAIQVIAAMKKEGKPLSDLAKIMDVFPQTLINVDTKSRPEISTVPELVAVIKSVE EKLGTSGRVLVRYSGTQNMCRVMVEGPTQEETLKYCKQIADVVKEELG
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family
Homologues:
Organism=Escherichia coli, GI1789566, Length=446, Percent_Identity=50.8968609865471, Blast_Score=395, Evalue=1e-111, Organism=Escherichia coli, GI1788361, Length=448, Percent_Identity=27.6785714285714, Blast_Score=107, Evalue=2e-24, Organism=Drosophila melanogaster, GI17864244, Length=360, Percent_Identity=25, Blast_Score=76, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLMM_SYNAS (Q2LRC1)
Other databases:
- EMBL: CP000252 - RefSeq: YP_460800.1 - HSSP: Q9P4V2 - ProteinModelPortal: Q2LRC1 - SMR: Q2LRC1 - STRING: Q2LRC1 - GeneID: 3885238 - GenomeReviews: CP000252_GR - KEGG: sat:SYN_02959 - NMPDR: fig|56780.10.peg.743 - eggNOG: COG1109 - HOGENOM: HBG644964 - OMA: VHDRYIE - PhylomeDB: Q2LRC1 - ProtClustDB: PRK14314 - BioCyc: SACI56780:SYN_02959-MONOMER - HAMAP: MF_01554_B - InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - InterPro: IPR006352 - Gene3D: G3DSA:3.40.120.10 - PRINTS: PR00509 - TIGRFAMs: TIGR01455
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV; SSF53738 A-D-PHexomutase_a/b/a-I/II/III
EC number: =5.4.2.10
Molecular weight: Translated: 48620; Mature: 48488
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00710 PGM_PMM
Important sites: ACT_SITE 101-101
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKLFGTDGVRGVANEYPMTAEMALNIGRATAFMFKREGHNPKILIGKDTRLSGYMLENA CCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHEEEEEECCCCCEEEEECCCCCCHHHHHHH LVSGICSMGVNAILVGVIPTPGIAYLTSSMRADAGIVISASHNPFQDNGIKIFSGDGFKL HHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCCEEEECCCCCCCCCCEEEECCCCCCC PDETELAIEDMILNNKMDQLLPRVSELGKAYRMDDARGRYIVFLKHTFPRELSLEGVKVV CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEE LDCANGATYRVAPETFYELGAEVTTLFDDPDGRNINVNCGSQYPETLAAEVLKQGADVGF EECCCCCEEEECHHHHHHCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHCCCCEEE AFDGDGDRLIAVDEKGNVLTGDQVIAICANVMKKEGKLTKNLVVRTVMSNIGLSVALEKL EEECCCCEEEEECCCCCEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEHHH DINSIMTKVGDRYVLEEMQANGSSIGGEDSGHVIFLQHHTTGDGIVTAIQVIAAMKKEGK HHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCC PLSDLAKIMDVFPQTLINVDTKSRPEISTVPELVAVIKSVEEKLGTSGRVLVRYSGTQNM CHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCE CRVMVEGPTQEETLKYCKQIADVVKEELG EEEEECCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GKLFGTDGVRGVANEYPMTAEMALNIGRATAFMFKREGHNPKILIGKDTRLSGYMLENA CCCCCCCCCCCCCCCCCCCHHHHHHHCHHHEEEEEECCCCCEEEEECCCCCCHHHHHHH LVSGICSMGVNAILVGVIPTPGIAYLTSSMRADAGIVISASHNPFQDNGIKIFSGDGFKL HHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCCEEEECCCCCCCCCCEEEECCCCCCC PDETELAIEDMILNNKMDQLLPRVSELGKAYRMDDARGRYIVFLKHTFPRELSLEGVKVV CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEE LDCANGATYRVAPETFYELGAEVTTLFDDPDGRNINVNCGSQYPETLAAEVLKQGADVGF EECCCCCEEEECHHHHHHCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHCCCCEEE AFDGDGDRLIAVDEKGNVLTGDQVIAICANVMKKEGKLTKNLVVRTVMSNIGLSVALEKL EEECCCCEEEEECCCCCEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEHHH DINSIMTKVGDRYVLEEMQANGSSIGGEDSGHVIFLQHHTTGDGIVTAIQVIAAMKKEGK HHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCC PLSDLAKIMDVFPQTLINVDTKSRPEISTVPELVAVIKSVEEKLGTSGRVLVRYSGTQNM CHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCE CRVMVEGPTQEETLKYCKQIADVVKEELG EEEEECCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA