Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85858594

Identifier: 85858594

GI number: 85858594

Start: 757426

End: 758631

Strand: Direct

Name: 85858594

Synonym: SYN_02963

Alternate gene names: NA

Gene position: 757426-758631 (Clockwise)

Preceding gene: 85858593

Following gene: 85858595

Centisome position: 23.82

GC content: 53.48

Gene sequence:

>1206_bases
GTGTACATGTTGACTCAGGAGATACTGGAAAGATACGCGGATGTGCTGGTCTGGGGGTTGACGACCGCCCGGAAGGAAAA
GTTCAAAAAAGGGGATATCGTTCTTATTCAGTTCGACCTGCCCGCCCTCCGCCTGGCCGAGATGCTCTACGCGAAACTGA
TCGATCGGGGGATGAACGCCCTCCAGCGTCTAAGCATGACCTCCTTCATGGAGCATCACTTCTATTCCCGGGCAAAAGCG
AAACAGCTTCTTTTTATCCCCCCTGGTGAGAGGGAACTCTATGCCAGTCTTAATGGCCGGATTTATCTCCATGCGCCGGA
ATCGCTTACCCATCTGGCGGATGTCGATCCTGCCGTCATCGCCAGGGTCCAGCTTTCCCGCAAGTTCCTGCGGGATATCT
TCAACGAGCGCGAAGATCAGGGTTTGTACGCATGGACCCTTTGCACCGTTCCCACGAAGGATATGGCGAAGCAGGCCGGT
CTTCCCCTGGATGACTATGAAAGGCAATTGATCCGGGCCTGTTATCTCGATGAACAGAATCCCGTGGGAAAATGGACTGC
GATCTATCGGGAAGTGGGAGAAATCAAGGCCTGGCTGAACAGCCTGCCTGTCCGGTCCTTCCTGATTGTCTCGCAGAACG
TGGATTTGCGAATCACCCCCGGTGAAAAACGCAAATGGATCGGAATATCCGGTCACAACATTCCCAGCTTTGAAATCTTC
CTTTCGCCGGACTGGCGGGGTACGGAAGGGACTTATTATGCAAACCAACCTTCCTTCCGCATGGGGAATTATGTGGAAGG
CGTGCGGCTCCGCTTTGAAAAAGGCGTGGCCGTCTCCACCGAGGCGCAGAAGGGGCAGGATTTTGTCGTCAAACAACTTG
CCATGGACAAGGGGGCGGCTCAGGTCGGCGAATTCTCCCTGACTGACAGACGCTTTTCCCGGATCGACCGGTTCATGGCG
GATACGCTGTTTGATGAAAATTACGGCGGAGAATACGGAAACTGCCACATCGCCCTGGGTTCTTCCTATTCGGATACTTA
TTCCGGCAATCCGGCGGAACTGGACAAGAAAAAGAAACGGGTGCTGGGATTCAACGATTCGGCCCTTCACTGGGATCTGA
TCAATACGGAGCCAAAAACCGTCACGGCGGAACTGACTACGGGAGAAAAGATTCTCATCTATGAAAACGGCGAGTTCTGT
TATTGA

Upstream 100 bases:

>100_bases
TGTTGACAGAACTGGATCCCAGCGGCACCCTGCCGCAGCCGCTGCTTCTAAAGAAATAATGCAATAAACCCTTTAATTTC
AGATTGATATAGGAGGTTCT

Downstream 100 bases:

>100_bases
GGCCGGCAGAATGGAAGAATTCCGCAAAACTCATCGGGGATAGAAGCCATGCAGACCTTCCTGCCTTATCCGGATTTCCG
CAAGTCTCTGGAGATTCTCG

Product: aminopeptidase

Products: NA

Alternate protein names: AP-T; Heat-stable aminopeptidase [H]

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MYMLTQEILERYADVLVWGLTTARKEKFKKGDIVLIQFDLPALRLAEMLYAKLIDRGMNALQRLSMTSFMEHHFYSRAKA
KQLLFIPPGERELYASLNGRIYLHAPESLTHLADVDPAVIARVQLSRKFLRDIFNEREDQGLYAWTLCTVPTKDMAKQAG
LPLDDYERQLIRACYLDEQNPVGKWTAIYREVGEIKAWLNSLPVRSFLIVSQNVDLRITPGEKRKWIGISGHNIPSFEIF
LSPDWRGTEGTYYANQPSFRMGNYVEGVRLRFEKGVAVSTEAQKGQDFVVKQLAMDKGAAQVGEFSLTDRRFSRIDRFMA
DTLFDENYGGEYGNCHIALGSSYSDTYSGNPAELDKKKKRVLGFNDSALHWDLINTEPKTVTAELTTGEKILIYENGEFC
Y

Sequences:

>Translated_401_residues
MYMLTQEILERYADVLVWGLTTARKEKFKKGDIVLIQFDLPALRLAEMLYAKLIDRGMNALQRLSMTSFMEHHFYSRAKA
KQLLFIPPGERELYASLNGRIYLHAPESLTHLADVDPAVIARVQLSRKFLRDIFNEREDQGLYAWTLCTVPTKDMAKQAG
LPLDDYERQLIRACYLDEQNPVGKWTAIYREVGEIKAWLNSLPVRSFLIVSQNVDLRITPGEKRKWIGISGHNIPSFEIF
LSPDWRGTEGTYYANQPSFRMGNYVEGVRLRFEKGVAVSTEAQKGQDFVVKQLAMDKGAAQVGEFSLTDRRFSRIDRFMA
DTLFDENYGGEYGNCHIALGSSYSDTYSGNPAELDKKKKRVLGFNDSALHWDLINTEPKTVTAELTTGEKILIYENGEFC
Y
>Mature_401_residues
MYMLTQEILERYADVLVWGLTTARKEKFKKGDIVLIQFDLPALRLAEMLYAKLIDRGMNALQRLSMTSFMEHHFYSRAKA
KQLLFIPPGERELYASLNGRIYLHAPESLTHLADVDPAVIARVQLSRKFLRDIFNEREDQGLYAWTLCTVPTKDMAKQAG
LPLDDYERQLIRACYLDEQNPVGKWTAIYREVGEIKAWLNSLPVRSFLIVSQNVDLRITPGEKRKWIGISGHNIPSFEIF
LSPDWRGTEGTYYANQPSFRMGNYVEGVRLRFEKGVAVSTEAQKGQDFVVKQLAMDKGAAQVGEFSLTDRRFSRIDRFMA
DTLFDENYGGEYGNCHIALGSSYSDTYSGNPAELDKKKKRVLGFNDSALHWDLINTEPKTVTAELTTGEKILIYENGEFC
Y

Specific function: Metal-dependent exopeptidase [H]

COG id: COG2309

COG function: function code E; Leucyl aminopeptidase (aminopeptidase T)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M29 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000787 [H]

Pfam domain/function: PF02073 Peptidase_M29 [H]

EC number: NA

Molecular weight: Translated: 45912; Mature: 45912

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYMLTQEILERYADVLVWGLTTARKEKFKKGDIVLIQFDLPALRLAEMLYAKLIDRGMNA
CCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
LQRLSMTSFMEHHFYSRAKAKQLLFIPPGERELYASLNGRIYLHAPESLTHLADVDPAVI
HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCEEEEECCCHHHHHHCCCHHHH
ARVQLSRKFLRDIFNEREDQGLYAWTLCTVPTKDMAKQAGLPLDDYERQLIRACYLDEQN
HHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCCC
PVGKWTAIYREVGEIKAWLNSLPVRSFLIVSQNVDLRITPGEKRKWIGISGHNIPSFEIF
CCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEECCCCCCEEEEECCCCCCCEEEE
LSPDWRGTEGTYYANQPSFRMGNYVEGVRLRFEKGVAVSTEAQKGQDFVVKQLAMDKGAA
ECCCCCCCCCCEECCCCCCCCCCCHHHHEEEEECCEEEECCCCCCHHHHHHHHHHCCCCH
QVGEFSLTDRRFSRIDRFMADTLFDENYGGEYGNCHIALGSSYSDTYSGNPAELDKKKKR
HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHH
VLGFNDSALHWDLINTEPKTVTAELTTGEKILIYENGEFCY
EECCCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCCC
>Mature Secondary Structure
MYMLTQEILERYADVLVWGLTTARKEKFKKGDIVLIQFDLPALRLAEMLYAKLIDRGMNA
CCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
LQRLSMTSFMEHHFYSRAKAKQLLFIPPGERELYASLNGRIYLHAPESLTHLADVDPAVI
HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCEEEEECCCHHHHHHCCCHHHH
ARVQLSRKFLRDIFNEREDQGLYAWTLCTVPTKDMAKQAGLPLDDYERQLIRACYLDEQN
HHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCCC
PVGKWTAIYREVGEIKAWLNSLPVRSFLIVSQNVDLRITPGEKRKWIGISGHNIPSFEIF
CCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEECCCCCCEEEEECCCCCCCEEEE
LSPDWRGTEGTYYANQPSFRMGNYVEGVRLRFEKGVAVSTEAQKGQDFVVKQLAMDKGAA
ECCCCCCCCCCEECCCCCCCCCCCHHHHEEEEECCEEEECCCCCCHHHHHHHHHHCCCCH
QVGEFSLTDRRFSRIDRFMADTLFDENYGGEYGNCHIALGSSYSDTYSGNPAELDKKKKR
HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHH
VLGFNDSALHWDLINTEPKTVTAELTTGEKILIYENGEFCY
EECCCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1368580; 9362117 [H]