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The map label for this gene is 85858576

Identifier: 85858576

GI number: 85858576

Start: 733879

End: 735444

Strand: Direct

Name: 85858576

Synonym: SYN_02979

Alternate gene names: NA

Gene position: 733879-735444 (Clockwise)

Preceding gene: 85858575

Following gene: 85858577

Centisome position: 23.08

GC content: 43.61

Gene sequence:

>1566_bases
TTGCTGAATTATACTGTAATAGCGTTTATCATGTTAGGATTAATTGCCATTGGGTTGGCAATCGGTTATTTTTTGAAATT
CAGACTTTCTCAGAAACGATTGGAATCTTCTGAGAACCTTGCGTTGAGGATTATTGATGAAGCCAAAAAAGAGGCTGAAA
CCATAAAAAAAGAGGCTGTGCTTCAGACAAAAGAGAATCTGCTGAAACTGAAGGCGGAATTCGAGAAGGAAACGAGAGAA
AGAAAGCTGGATCTGGATAATTTAGAGCGGAGAATTCGCTCAAAGGAAGAAAATCTCGATAAACGAATTGATTCAATGTC
TCAGAAAGAGAATGCAATCGAAGTTCGAGAAAAGAATTTGCTGTCCAAAGAAATGCAGCTCAATGAGAAGCACGATAAGT
TAAGCAGAATGATTGGGGAACAGAAAGAAAAACTGGAGCAGATTGCCGACATAACTTCGGAAGAGGCAAAAGATTTTTTA
ATCCGGTCTATGGAAGCTGCTGCGAAGCGTGATGCTGCCATGCTGATTAGAAAAATCGAAGAAGATGCAAAGAGGGAGGC
AGACAAGAAGTCGAGAGAAATTATTGCTTATGCTGTGCAACGTTATGCCGGTGACTATGTTGCGGAAAACACTGTTTCTG
TAGTCAATCTTCCAAACGATGAAATGAAGGGGCGTATCATTGGGCGGGAAGGTCGCAATATCAGAGCGATAGAGGCAGCC
ACTGGAATTGATCTTATTGTTGACGATACCCCGGAAGCCGTAGTTTTGTCCAGTTTTGATCCTATACGGCGAGAGGTGGC
AAAAATTTCACTGGAAAGATTGATTACGGATGGAAGGATTCATCCTGGCAGAATTGAAGATATTGTAAAGAAGGTGCGGT
TGGAAGTTGATAGTATTATAAAGGAAACAGGGGAAAGGGTTTCCTTTGACGTAGGAGTGCATGATATTCATCCAGAACTC
ATTAACCTCCTGGGCAGTTTGAAATATCGGACAAGCTATTCTCAGAATGTTCTCCAGCATTCCATTGATGTCGCTCATCT
GACGGGTATGATGGCGGCGGAATTGAAGATGAATATAAAGGAGGCAAAACGTGCGGGGCTGCTTCACGATATCGGTAAAG
CGGTTGATCATAAAATAGAGGGGACTCATGCGGCAATCGGGGCTGATTACGCGAAACGTTTTGGAGAATCGCAAAGGATT
GTTCAGGCCATCGCCGCCCACCATGACGATGGCAGAACGAACACGCTTCTTGGTGTCTTGGTTCAGGCAGCAGACACCTT
GTCTGCTGCAAGACCAGGAGCCCGAAGGGAAATGCTGGAAACCTATGTAAAACGATTAGAGGAATTGGAAAATATAGCTA
ATTCATTCAACGGCGTCGATAAGTGTTTTGCCATCCAGGCCGGCAGAGAAATCCGGATCCTTGTCGGAAGTGAAAAACTT
TCGGACAACGATGCGATGATGCTTTGCAAGGATATCGTCAAAAAGATCGAGTCGGAATTGACATATCCGGGCCAGATTAA
GGTAACAGTGATTAGAGAAACGCGAGTATCGGATTTCGCAAAATAG

Upstream 100 bases:

>100_bases
TTGTCATGCTGCCGTGTCGGAAATCAGCAGAATCCGATGACTGAGAATGGTTTGTTGTTCGTCAGGGATGCGTAAGAGGT
TTATGAGGAGGTAAATAGTT

Downstream 100 bases:

>100_bases
CTGCCGGAGACGCATTCAATCATGGTCAGGTGATTTTGAATCTTTTTGTTAGCCCATACTTTTTAGTTACTAAGTTAAAT
TCTGAAATACTAAGGGAATT

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 521; Mature: 521

Protein sequence:

>521_residues
MLNYTVIAFIMLGLIAIGLAIGYFLKFRLSQKRLESSENLALRIIDEAKKEAETIKKEAVLQTKENLLKLKAEFEKETRE
RKLDLDNLERRIRSKEENLDKRIDSMSQKENAIEVREKNLLSKEMQLNEKHDKLSRMIGEQKEKLEQIADITSEEAKDFL
IRSMEAAAKRDAAMLIRKIEEDAKREADKKSREIIAYAVQRYAGDYVAENTVSVVNLPNDEMKGRIIGREGRNIRAIEAA
TGIDLIVDDTPEAVVLSSFDPIRREVAKISLERLITDGRIHPGRIEDIVKKVRLEVDSIIKETGERVSFDVGVHDIHPEL
INLLGSLKYRTSYSQNVLQHSIDVAHLTGMMAAELKMNIKEAKRAGLLHDIGKAVDHKIEGTHAAIGADYAKRFGESQRI
VQAIAAHHDDGRTNTLLGVLVQAADTLSAARPGARREMLETYVKRLEELENIANSFNGVDKCFAIQAGREIRILVGSEKL
SDNDAMMLCKDIVKKIESELTYPGQIKVTVIRETRVSDFAK

Sequences:

>Translated_521_residues
MLNYTVIAFIMLGLIAIGLAIGYFLKFRLSQKRLESSENLALRIIDEAKKEAETIKKEAVLQTKENLLKLKAEFEKETRE
RKLDLDNLERRIRSKEENLDKRIDSMSQKENAIEVREKNLLSKEMQLNEKHDKLSRMIGEQKEKLEQIADITSEEAKDFL
IRSMEAAAKRDAAMLIRKIEEDAKREADKKSREIIAYAVQRYAGDYVAENTVSVVNLPNDEMKGRIIGREGRNIRAIEAA
TGIDLIVDDTPEAVVLSSFDPIRREVAKISLERLITDGRIHPGRIEDIVKKVRLEVDSIIKETGERVSFDVGVHDIHPEL
INLLGSLKYRTSYSQNVLQHSIDVAHLTGMMAAELKMNIKEAKRAGLLHDIGKAVDHKIEGTHAAIGADYAKRFGESQRI
VQAIAAHHDDGRTNTLLGVLVQAADTLSAARPGARREMLETYVKRLEELENIANSFNGVDKCFAIQAGREIRILVGSEKL
SDNDAMMLCKDIVKKIESELTYPGQIKVTVIRETRVSDFAK
>Mature_521_residues
MLNYTVIAFIMLGLIAIGLAIGYFLKFRLSQKRLESSENLALRIIDEAKKEAETIKKEAVLQTKENLLKLKAEFEKETRE
RKLDLDNLERRIRSKEENLDKRIDSMSQKENAIEVREKNLLSKEMQLNEKHDKLSRMIGEQKEKLEQIADITSEEAKDFL
IRSMEAAAKRDAAMLIRKIEEDAKREADKKSREIIAYAVQRYAGDYVAENTVSVVNLPNDEMKGRIIGREGRNIRAIEAA
TGIDLIVDDTPEAVVLSSFDPIRREVAKISLERLITDGRIHPGRIEDIVKKVRLEVDSIIKETGERVSFDVGVHDIHPEL
INLLGSLKYRTSYSQNVLQHSIDVAHLTGMMAAELKMNIKEAKRAGLLHDIGKAVDHKIEGTHAAIGADYAKRFGESQRI
VQAIAAHHDDGRTNTLLGVLVQAADTLSAARPGARREMLETYVKRLEELENIANSFNGVDKCFAIQAGREIRILVGSEKL
SDNDAMMLCKDIVKKIESELTYPGQIKVTVIRETRVSDFAK

Specific function: Catalyzes the hydrolysis of both 2',3'-cyclic AMP and 2',3'-cyclic GMP into 3'-AMP and 3'-GMP, respectively, at the 3'- terminal of RNA

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CNPD_SYNAS (Q2LRA0)

Other databases:

- EMBL:   CP000252
- RefSeq:   YP_460778.1
- ProteinModelPortal:   Q2LRA0
- STRING:   Q2LRA0
- GeneID:   3885321
- GenomeReviews:   CP000252_GR
- KEGG:   sat:SYN_02979
- NMPDR:   fig|56780.10.peg.722
- eggNOG:   COG1418
- HOGENOM:   HBG734610
- OMA:   HPGRIEE
- BioCyc:   SACI56780:SYN_02979-MONOMER
- HAMAP:   MF_00335
- InterPro:   IPR017705
- InterPro:   IPR022711
- InterPro:   IPR004087
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR003607
- InterPro:   IPR006675
- SMART:   SM00471
- SMART:   SM00322
- TIGRFAMs:   TIGR00277
- TIGRFAMs:   TIGR03319

Pfam domain/function: PF12072 DUF3552; PF00013 KH_1

EC number: =3.1.4.16

Molecular weight: Translated: 58835; Mature: 58835

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1457ffb0)-;

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNYTVIAFIMLGLIAIGLAIGYFLKFRLSQKRLESSENLALRIIDEAKKEAETIKKEAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHH
LQTKENLLKLKAEFEKETRERKLDLDNLERRIRSKEENLDKRIDSMSQKENAIEVREKNL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSKEMQLNEKHDKLSRMIGEQKEKLEQIADITSEEAKDFLIRSMEAAAKRDAAMLIRKIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDAKREADKKSREIIAYAVQRYAGDYVAENTVSVVNLPNDEMKGRIIGREGRNIRAIEAA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEECCCHHHCCCEECCCCCCEEEEECC
TGIDLIVDDTPEAVVLSSFDPIRREVAKISLERLITDGRIHPGRIEDIVKKVRLEVDSII
CCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
KETGERVSFDVGVHDIHPELINLLGSLKYRTSYSQNVLQHSIDVAHLTGMMAAELKMNIK
HHCCCEEEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAKRAGLLHDIGKAVDHKIEGTHAAIGADYAKRFGESQRIVQAIAAHHDDGRTNTLLGVL
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHH
VQAADTLSAARPGARREMLETYVKRLEELENIANSFNGVDKCFAIQAGREIRILVGSEKL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEECCCEEEEEECCCCC
SDNDAMMLCKDIVKKIESELTYPGQIKVTVIRETRVSDFAK
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHCCH
>Mature Secondary Structure
MLNYTVIAFIMLGLIAIGLAIGYFLKFRLSQKRLESSENLALRIIDEAKKEAETIKKEAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHH
LQTKENLLKLKAEFEKETRERKLDLDNLERRIRSKEENLDKRIDSMSQKENAIEVREKNL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSKEMQLNEKHDKLSRMIGEQKEKLEQIADITSEEAKDFLIRSMEAAAKRDAAMLIRKIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDAKREADKKSREIIAYAVQRYAGDYVAENTVSVVNLPNDEMKGRIIGREGRNIRAIEAA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEECCCHHHCCCEECCCCCCEEEEECC
TGIDLIVDDTPEAVVLSSFDPIRREVAKISLERLITDGRIHPGRIEDIVKKVRLEVDSII
CCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
KETGERVSFDVGVHDIHPELINLLGSLKYRTSYSQNVLQHSIDVAHLTGMMAAELKMNIK
HHCCCEEEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAKRAGLLHDIGKAVDHKIEGTHAAIGADYAKRFGESQRIVQAIAAHHDDGRTNTLLGVL
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHH
VQAADTLSAARPGARREMLETYVKRLEELENIANSFNGVDKCFAIQAGREIRILVGSEKL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEECCCEEEEEECCCCC
SDNDAMMLCKDIVKKIESELTYPGQIKVTVIRETRVSDFAK
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA