| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is cheR [H]
Identifier: 85858534
GI number: 85858534
Start: 688923
End: 690494
Strand: Direct
Name: cheR [H]
Synonym: SYN_00434
Alternate gene names: 85858534
Gene position: 688923-690494 (Clockwise)
Preceding gene: 85858533
Following gene: 85858535
Centisome position: 21.67
GC content: 52.29
Gene sequence:
>1572_bases ATGGATCGGTTTATTTCCGATGAGCAATGGCGGCGGTTGGCGGAATGGATAACCTTTCATATGGGGTTGCACATGCCACG GGAACGCCTGCCTGATTTGAAGCGGCGCCTGTTGTCGGCCGCCCGGGAATTTCATTTCGATTCCATCGAACCGTTTGTGT CCTGGCTGCTCTCCACAAAGCTGACGCAGCGGCAGATTGAAACGCTGGCCAGTCATCTGACCGTAGGAGAAACCTATTTT TTCCGGGAAACGGCAAGCCTGGAGGCCTTGGAAAAATATATTCTGCCGGAATTGATCGAATCGCGGCGCAGCACGCGTTC TCTCAGGGTCTGGAGTGCCGGCTGCGCGACAGGCGAGGAACCTTACACGATTGCGATCATGCTTTCCCGGCTGATTCCGG ATATCAGCAAGTGGCAGGTTACCCTTCTCGCGACAGATATAAACGCACGTTCTCTGGAGCGGGCTTCACAGGGAATATAT CGGGAATGGTCATTCCGCGGCGATTTCCAATGGCTTAAGGATCAGTATTTTACGCGGACGCTCGATGGACGGTACCGGAT TTCAGAAAAAATAAGGAAGATGGTAACCTTCAATTACCTGAACCTGGCAACGGATACTTATCCTTCACTGTACAATAACA CGAATGCCATGGACATCATCTTCTGCCGGAACGTTCTGATGTATCTGGAACCCTCGCTGGCGAAAAGGGTTGTCGGGCGT TTCTATCGCGCGCTGATCGACGAAGGGTGGGTCCTTCCCAGCGTAACGGAAGGATTCCACCTGCTCTTTACAAGATTTGT AGCAGTGACTTTTCCCGGTGTCACCCTGTATCAGAAAAGGATGGATCAGCGGGGGACACTGGAAATATACCACCATAGCC GGAGAAATTCGAAAAACGACGCAGCAGTGAAAGGACAGACCGAACTGGGGGAATGGGCCTCCCTGTCAACTGCGGAGCCC TTGCCGTCCGATTCCATCCCGGAGCGGAAGACTGAACCCTCCAGAATGGCGCCGTCCGTTTCTGAATTTCCACCGTCTGC AGCAATGAAAGAAATCGGGGAAGAAGCTCTCCATGAAAGTGCCCTGCGGCTTTTCAAAGAGGGGCGATATAGTGAATGTG AACAAATTCTCACTTCATTGCTTGAGCAGTATCCGGAGAGTTTCCACGGTCAGGCGCTGATGGCCCGTCTTCATGCGGAT CAGGGGCGTCTTCCCGAAGCGCAGGAGTGGTGTGAAAAGGCCATTTCAAACAATAAACTTGACGCGGGATGCCATTACCT GCTGGCGGTTATTTTTATTGAACAGCGACGTTTCGGCGATGCGGAACAGTCACTGCATCATGCCCTTTACCTGGACCCTG ATTTTGTCCTGGCTCATTTTACTCTGGGCAATCTCGTCCGGGAGGAAGGCCGGAAAACCCTTTCGTCAAAGCACTTTGAA CACGCCCTCCTGTTGCTGCAAAACTATCAGCCGGAGGAAATTCTGCCGGAATCCGATGGGGTAACGGCAGGAAGATTAAA AGATATTATTTTAATGGCGGATCTGGGGAGATCAAACGCCCCGGGGGCATAA
Upstream 100 bases:
>100_bases GAGATGAACTCGTGATTCTTCAGAACCCGGAAGGATATCTTTCTCCTGAGGATCACGATATCCTCGATCAGGAGCTTCCA CCGTCATAGATAAGGAGTGC
Downstream 100 bases:
>100_bases ATTTCGTTGATGCGAGGAAAAAACAGTTTGGCTGAATTCAGAAATCCCACAGATGCCTTGTGGGTACCCGGAGAGGAAGA GAAAGAACGGATTCTGAAGG
Product: chemotaxis protein methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 523; Mature: 523
Protein sequence:
>523_residues MDRFISDEQWRRLAEWITFHMGLHMPRERLPDLKRRLLSAAREFHFDSIEPFVSWLLSTKLTQRQIETLASHLTVGETYF FRETASLEALEKYILPELIESRRSTRSLRVWSAGCATGEEPYTIAIMLSRLIPDISKWQVTLLATDINARSLERASQGIY REWSFRGDFQWLKDQYFTRTLDGRYRISEKIRKMVTFNYLNLATDTYPSLYNNTNAMDIIFCRNVLMYLEPSLAKRVVGR FYRALIDEGWVLPSVTEGFHLLFTRFVAVTFPGVTLYQKRMDQRGTLEIYHHSRRNSKNDAAVKGQTELGEWASLSTAEP LPSDSIPERKTEPSRMAPSVSEFPPSAAMKEIGEEALHESALRLFKEGRYSECEQILTSLLEQYPESFHGQALMARLHAD QGRLPEAQEWCEKAISNNKLDAGCHYLLAVIFIEQRRFGDAEQSLHHALYLDPDFVLAHFTLGNLVREEGRKTLSSKHFE HALLLLQNYQPEEILPESDGVTAGRLKDIILMADLGRSNAPGA
Sequences:
>Translated_523_residues MDRFISDEQWRRLAEWITFHMGLHMPRERLPDLKRRLLSAAREFHFDSIEPFVSWLLSTKLTQRQIETLASHLTVGETYF FRETASLEALEKYILPELIESRRSTRSLRVWSAGCATGEEPYTIAIMLSRLIPDISKWQVTLLATDINARSLERASQGIY REWSFRGDFQWLKDQYFTRTLDGRYRISEKIRKMVTFNYLNLATDTYPSLYNNTNAMDIIFCRNVLMYLEPSLAKRVVGR FYRALIDEGWVLPSVTEGFHLLFTRFVAVTFPGVTLYQKRMDQRGTLEIYHHSRRNSKNDAAVKGQTELGEWASLSTAEP LPSDSIPERKTEPSRMAPSVSEFPPSAAMKEIGEEALHESALRLFKEGRYSECEQILTSLLEQYPESFHGQALMARLHAD QGRLPEAQEWCEKAISNNKLDAGCHYLLAVIFIEQRRFGDAEQSLHHALYLDPDFVLAHFTLGNLVREEGRKTLSSKHFE HALLLLQNYQPEEILPESDGVTAGRLKDIILMADLGRSNAPGA >Mature_523_residues MDRFISDEQWRRLAEWITFHMGLHMPRERLPDLKRRLLSAAREFHFDSIEPFVSWLLSTKLTQRQIETLASHLTVGETYF FRETASLEALEKYILPELIESRRSTRSLRVWSAGCATGEEPYTIAIMLSRLIPDISKWQVTLLATDINARSLERASQGIY REWSFRGDFQWLKDQYFTRTLDGRYRISEKIRKMVTFNYLNLATDTYPSLYNNTNAMDIIFCRNVLMYLEPSLAKRVVGR FYRALIDEGWVLPSVTEGFHLLFTRFVAVTFPGVTLYQKRMDQRGTLEIYHHSRRNSKNDAAVKGQTELGEWASLSTAEP LPSDSIPERKTEPSRMAPSVSEFPPSAAMKEIGEEALHESALRLFKEGRYSECEQILTSLLEQYPESFHGQALMARLHAD QGRLPEAQEWCEKAISNNKLDAGCHYLLAVIFIEQRRFGDAEQSLHHALYLDPDFVLAHFTLGNLVREEGRKTLSSKHFE HALLLLQNYQPEEILPESDGVTAGRLKDIILMADLGRSNAPGA
Specific function: Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP [H]
COG id: COG1352
COG function: function code NT; Methylase of chemotaxis methyl-accepting proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheR-type methyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788193, Length=282, Percent_Identity=28.3687943262411, Blast_Score=101, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022642 - InterPro: IPR000780 - InterPro: IPR022641 [H]
Pfam domain/function: PF01739 CheR; PF03705 CheR_N [H]
EC number: =2.1.1.80 [H]
Molecular weight: Translated: 60278; Mature: 60278
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: PS50293 TPR_REGION ; PS50123 CHER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRFISDEQWRRLAEWITFHMGLHMPRERLPDLKRRLLSAAREFHFDSIEPFVSWLLSTK CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LTQRQIETLASHLTVGETYFFRETASLEALEKYILPELIESRRSTRSLRVWSAGCATGEE HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCC PYTIAIMLSRLIPDISKWQVTLLATDINARSLERASQGIYREWSFRGDFQWLKDQYFTRT CCHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHH LDGRYRISEKIRKMVTFNYLNLATDTYPSLYNNTNAMDIIFCRNVLMYLEPSLAKRVVGR CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHH FYRALIDEGWVLPSVTEGFHLLFTRFVAVTFPGVTLYQKRMDQRGTLEIYHHSRRNSKND HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCCCCCC AAVKGQTELGEWASLSTAEPLPSDSIPERKTEPSRMAPSVSEFPPSAAMKEIGEEALHES CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHCCCHHHHHHHHHHHHHHH ALRLFKEGRYSECEQILTSLLEQYPESFHGQALMARLHADQGRLPEAQEWCEKAISNNKL HHHHHHCCCHHHHHHHHHHHHHHCCHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC DAGCHYLLAVIFIEQRRFGDAEQSLHHALYLDPDFVLAHFTLGNLVREEGRKTLSSKHFE HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HALLLLQNYQPEEILPESDGVTAGRLKDIILMADLGRSNAPGA HHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHEEECCCCCCCCC >Mature Secondary Structure MDRFISDEQWRRLAEWITFHMGLHMPRERLPDLKRRLLSAAREFHFDSIEPFVSWLLSTK CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LTQRQIETLASHLTVGETYFFRETASLEALEKYILPELIESRRSTRSLRVWSAGCATGEE HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCC PYTIAIMLSRLIPDISKWQVTLLATDINARSLERASQGIYREWSFRGDFQWLKDQYFTRT CCHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHH LDGRYRISEKIRKMVTFNYLNLATDTYPSLYNNTNAMDIIFCRNVLMYLEPSLAKRVVGR CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHH FYRALIDEGWVLPSVTEGFHLLFTRFVAVTFPGVTLYQKRMDQRGTLEIYHHSRRNSKND HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCCCCCC AAVKGQTELGEWASLSTAEPLPSDSIPERKTEPSRMAPSVSEFPPSAAMKEIGEEALHES CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHCCCHHHHHHHHHHHHHHH ALRLFKEGRYSECEQILTSLLEQYPESFHGQALMARLHADQGRLPEAQEWCEKAISNNKL HHHHHHCCCHHHHHHHHHHHHHHCCHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC DAGCHYLLAVIFIEQRRFGDAEQSLHHALYLDPDFVLAHFTLGNLVREEGRKTLSSKHFE HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HALLLLQNYQPEEILPESDGVTAGRLKDIILMADLGRSNAPGA HHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]