Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

Click here to switch to the map view.

The map label for this gene is 85858487

Identifier: 85858487

GI number: 85858487

Start: 642335

End: 643534

Strand: Direct

Name: 85858487

Synonym: SYN_00534

Alternate gene names: NA

Gene position: 642335-643534 (Clockwise)

Preceding gene: 85858486

Following gene: 85858488

Centisome position: 20.2

GC content: 54.0

Gene sequence:

>1200_bases
ATGTTTCGTTTTCTGCTGATTTTTTTTCTGCTTTATGGCGGCATTCACGGATATGCCTTCTGGAAGATCAAGTCGGCTTT
TTCTCCGGGGCCGACACTCTCGATCCTGATGATCGTGATCATGGCGATCATGATTCTTGCCCCGGCAGGAGTCAGGATAG
CGGAACAGAACGGTCTGGAAGCGACTGCCCGGACGCTTTCTCTTGTTGGATATACCTGGATGGGGGGGCTGTTTCTCTTC
CTTTCCGCTTCTCTCCTGCTCGATTTCTCCCGCCTGATTCTTTTTCTGGCCGAATGGATCTGGAATAAAGAGATTTTTGC
CTCCTTGATGCCCTCGCCCCGTCAGGCTCTGCTTATTCCCCTGACTCTGGCTCTGGGAATTTATGTTTACGGCTGGTTTG
AGGCCCGGAACATCCGGGTGCAAGCTCTGACAATCAAGACGGAGAAACTGTTGCCGGAAGCAGGACCGCTTCGGCTCGTT
CAGATTTCCGATGTCCATGTCGGGCTGATGATCGGTTCCGATTTCGTTTCCCGGATGCTCCGGGTCGTGCGGGACGCAAA
GCCTGATCTTCTTGTATCGACGGGGGATCTGGTGGACGGACAGATCAACAGTCTGGAGAAGGTTCTTCCCCTCCTGCAGG
ACATCCGACCGCGTCTGGGAAAGTATGCCATTACCGGGAATCATGAATTTTATGCTGGAATTTCCGAGGCTCAGAAATTT
GCCCGCAAGGCCGGGTTTGTCCTGCTTCGGGGTGAGGGGGTGACGGTTGCCGGTTTGATCAATATCGCGGGAATCGATGA
TCCGGCAGGACGGGCTATCGGTCAGCACCGCCCCGTCGTGGAGGCGGAATTGCTGAAAAACCTGCCGGAACAGCATTTTA
CCATTCTTTTGAAGCATCAGCCAATCGTGAACAGGAATGCACTCGGCCTTTTTGATTTGCAGCTTTCCGGCCATACCCAT
AAGGGCCAGATTTTTCCCTTCAGTCTGATTACCCGATTTTATTTTCCCCTCCATACGGGTTTCTTCCGGCTTTCTGATTC
TTCCTGCCTTCATGTGAGCCGGGGGACTGGAACCTGGGGGCCTCCGATCCGCTTTTTCGCGCCCCCTGAAGTCACCGTGA
TTGATCTTGTCCCGGCCGGTGTTCTGCCGAGGGAATCCTTGGGCGGCAGCAGAGTACACTTCTCCAGCGGGAAGGACTGA

Upstream 100 bases:

>100_bases
CCAACAATCTGATCGCCGCGATTTTCGGCTTTCAGCCGGCGTCCTTTTATGAAGTGCCCGCGGCGGCCAAGGCAGCGCCG
AAGGTCAAGTTTTAAAAGGC

Downstream 100 bases:

>100_bases
TCACCGATCATGGATATTATTACATCGCATATACAGACTGATTTCGATTCCCTGGGTTCCATGCTGGCGGCGAAGCTGCT
GTACCCGGAAGCCCTGATCG

Product: phosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MFRFLLIFFLLYGGIHGYAFWKIKSAFSPGPTLSILMIVIMAIMILAPAGVRIAEQNGLEATARTLSLVGYTWMGGLFLF
LSASLLLDFSRLILFLAEWIWNKEIFASLMPSPRQALLIPLTLALGIYVYGWFEARNIRVQALTIKTEKLLPEAGPLRLV
QISDVHVGLMIGSDFVSRMLRVVRDAKPDLLVSTGDLVDGQINSLEKVLPLLQDIRPRLGKYAITGNHEFYAGISEAQKF
ARKAGFVLLRGEGVTVAGLINIAGIDDPAGRAIGQHRPVVEAELLKNLPEQHFTILLKHQPIVNRNALGLFDLQLSGHTH
KGQIFPFSLITRFYFPLHTGFFRLSDSSCLHVSRGTGTWGPPIRFFAPPEVTVIDLVPAGVLPRESLGGSRVHFSSGKD

Sequences:

>Translated_399_residues
MFRFLLIFFLLYGGIHGYAFWKIKSAFSPGPTLSILMIVIMAIMILAPAGVRIAEQNGLEATARTLSLVGYTWMGGLFLF
LSASLLLDFSRLILFLAEWIWNKEIFASLMPSPRQALLIPLTLALGIYVYGWFEARNIRVQALTIKTEKLLPEAGPLRLV
QISDVHVGLMIGSDFVSRMLRVVRDAKPDLLVSTGDLVDGQINSLEKVLPLLQDIRPRLGKYAITGNHEFYAGISEAQKF
ARKAGFVLLRGEGVTVAGLINIAGIDDPAGRAIGQHRPVVEAELLKNLPEQHFTILLKHQPIVNRNALGLFDLQLSGHTH
KGQIFPFSLITRFYFPLHTGFFRLSDSSCLHVSRGTGTWGPPIRFFAPPEVTVIDLVPAGVLPRESLGGSRVHFSSGKD
>Mature_399_residues
MFRFLLIFFLLYGGIHGYAFWKIKSAFSPGPTLSILMIVIMAIMILAPAGVRIAEQNGLEATARTLSLVGYTWMGGLFLF
LSASLLLDFSRLILFLAEWIWNKEIFASLMPSPRQALLIPLTLALGIYVYGWFEARNIRVQALTIKTEKLLPEAGPLRLV
QISDVHVGLMIGSDFVSRMLRVVRDAKPDLLVSTGDLVDGQINSLEKVLPLLQDIRPRLGKYAITGNHEFYAGISEAQKF
ARKAGFVLLRGEGVTVAGLINIAGIDDPAGRAIGQHRPVVEAELLKNLPEQHFTILLKHQPIVNRNALGLFDLQLSGHTH
KGQIFPFSLITRFYFPLHTGFFRLSDSSCLHVSRGTGTWGPPIRFFAPPEVTVIDLVPAGVLPRESLGGSRVHFSSGKD

Specific function: Unknown

COG id: COG1408

COG function: function code R; Predicted phosphohydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily [H]

Homologues:

Organism=Homo sapiens, GI210031196, Length=258, Percent_Identity=28.2945736434109, Blast_Score=108, Evalue=9e-24,
Organism=Homo sapiens, GI210031210, Length=258, Percent_Identity=28.2945736434109, Blast_Score=105, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI71996034, Length=282, Percent_Identity=26.241134751773, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI115535030, Length=251, Percent_Identity=28.6852589641434, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI115535028, Length=252, Percent_Identity=28.5714285714286, Blast_Score=96, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 44109; Mature: 44109

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRFLLIFFLLYGGIHGYAFWKIKSAFSPGPTLSILMIVIMAIMILAPAGVRIAEQNGLE
CHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCH
ATARTLSLVGYTWMGGLFLFLSASLLLDFSRLILFLAEWIWNKEIFASLMPSPRQALLIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHEEHH
LTLALGIYVYGWFEARNIRVQALTIKTEKLLPEAGPLRLVQISDVHVGLMIGSDFVSRML
HHHHHHHHHEEEEEECCEEEEEEEEEHHHHCCCCCCEEEEEECCEEEEEEECHHHHHHHH
RVVRDAKPDLLVSTGDLVDGQINSLEKVLPLLQDIRPRLGKYAITGNHEFYAGISEAQKF
HHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCEECCHHHHHHH
ARKAGFVLLRGEGVTVAGLINIAGIDDPAGRAIGQHRPVVEAELLKNLPEQHFTILLKHQ
HHHCCEEEEECCCEEEEEEEEECCCCCHHHCCCCCCCCCHHHHHHHCCCHHHEEEEEECC
PIVNRNALGLFDLQLSGHTHKGQIFPFSLITRFYFPLHTGFFRLSDSSCLHVSRGTGTWG
CCCCCCCCEEEEEEECCCCCCCCEEHHHHHHHHHHHHHCCEEEECCCCEEEEECCCCCCC
PPIRFFAPPEVTVIDLVPAGVLPRESLGGSRVHFSSGKD
CCEEEECCCCEEEEEECCCCCCCHHCCCCCEEECCCCCC
>Mature Secondary Structure
MFRFLLIFFLLYGGIHGYAFWKIKSAFSPGPTLSILMIVIMAIMILAPAGVRIAEQNGLE
CHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCH
ATARTLSLVGYTWMGGLFLFLSASLLLDFSRLILFLAEWIWNKEIFASLMPSPRQALLIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHEEHH
LTLALGIYVYGWFEARNIRVQALTIKTEKLLPEAGPLRLVQISDVHVGLMIGSDFVSRML
HHHHHHHHHEEEEEECCEEEEEEEEEHHHHCCCCCCEEEEEECCEEEEEEECHHHHHHHH
RVVRDAKPDLLVSTGDLVDGQINSLEKVLPLLQDIRPRLGKYAITGNHEFYAGISEAQKF
HHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCEECCHHHHHHH
ARKAGFVLLRGEGVTVAGLINIAGIDDPAGRAIGQHRPVVEAELLKNLPEQHFTILLKHQ
HHHCCEEEEECCCEEEEEEEEECCCCCHHHCCCCCCCCCHHHHHHHCCCHHHEEEEEECC
PIVNRNALGLFDLQLSGHTHKGQIFPFSLITRFYFPLHTGFFRLSDSSCLHVSRGTGTWG
CCCCCCCCEEEEEEECCCCCCCCEEHHHHHHHHHHHHHCCEEEECCCCEEEEECCCCCCC
PPIRFFAPPEVTVIDLVPAGVLPRESLGGSRVHFSSGKD
CCEEEECCCCEEEEEECCCCCCCHHCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]