| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is ygcG [H]
Identifier: 85858484
GI number: 85858484
Start: 640053
End: 640859
Strand: Direct
Name: ygcG [H]
Synonym: SYN_00537
Alternate gene names: 85858484
Gene position: 640053-640859 (Clockwise)
Preceding gene: 85858483
Following gene: 85858485
Centisome position: 20.13
GC content: 56.51
Gene sequence:
>807_bases ATGATCAATCGGGATCCATGCTTTATATGGCCCCTGCGGGCTGTTGTTTTCATCTTTTTGACAATACTGGCCGTGTTGTT GAACTCCCGACCGTCACTGGCTCAGGACACCTTCCCATCACCACAGGGTGCGGTCAATGATTTTGCCGGTGTGATCTCAG CTGCCGATGCCGTGCGGATGGAAGATCTTGCCCGGGAAGTGCTCGATAAAACGGGGACATCGGTTGTCGTGGCAACGGTA AAGTCCATTGGTGATAACGATCTTAATGACTATGTCAACCGCCTCTATCAGGCCTGGGGGATAGGAGGAAAGGGAGAAGA CCGGGGAGTCCTGATTTTCCTTACCTTTCAGGAAAGAAAGATCCGGATCGAGACCGGTTATGGTGTGGAGGGTATCCTTC CTGACGGGCGGGTTGGTGCAATTCTCGATCAGAATGTGGTTCCTTACCTGAAAAAAGGGGAATACAGTCTTGGACTTGTT CGTGCCGCCACGGCCGTTTCCCTCATCCTCGCTCAAGAGGCAGGAGTGACCCTGACGGGCACCCCGACCGTTCCGCAGCC GGTAAACAGGCCGGCCAATCAGGGCGGCGGATATGGCCCCTGGCTTTTCCTTCTGCTGATCTTTCTTTTCGTTATGGGGA GCCGCAGAGGGCGCGAGTCCCTGCCTCTGATTCTGATGATGCTGCTCAGCGGCAGCGGTCGAAGGGGCGGTGGCGGAGAT TTCGATGGATTCGGGAGCTTTGGAGGCGGCTTTGGCGGTTTCGGGGGAGGCAGCAGTGGAGGTGGCGGTGCCAGCCGCGG GTTTTAG
Upstream 100 bases:
>100_bases ATAAGTTCTGGAATTAACATTTGCTATTTTGTTACGCACTGACATATGATGCACTGAAAAAAATGCTGTTTTTCGGACAG AAAGGCCCTGTGAAAGCAAC
Downstream 100 bases:
>100_bases GAGGCAAAGGCCAAGTGGCGAGAATACCAAAAAATCCTGAAGAGATCTTTCCTGAAATAACGGAGGATTACAGGCAGATT TTCGGGGACAGCCTGGTGTC
Product: beta-propeller domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MINRDPCFIWPLRAVVFIFLTILAVLLNSRPSLAQDTFPSPQGAVNDFAGVISAADAVRMEDLAREVLDKTGTSVVVATV KSIGDNDLNDYVNRLYQAWGIGGKGEDRGVLIFLTFQERKIRIETGYGVEGILPDGRVGAILDQNVVPYLKKGEYSLGLV RAATAVSLILAQEAGVTLTGTPTVPQPVNRPANQGGGYGPWLFLLLIFLFVMGSRRGRESLPLILMMLLSGSGRRGGGGD FDGFGSFGGGFGGFGGGSSGGGGASRGF
Sequences:
>Translated_268_residues MINRDPCFIWPLRAVVFIFLTILAVLLNSRPSLAQDTFPSPQGAVNDFAGVISAADAVRMEDLAREVLDKTGTSVVVATV KSIGDNDLNDYVNRLYQAWGIGGKGEDRGVLIFLTFQERKIRIETGYGVEGILPDGRVGAILDQNVVPYLKKGEYSLGLV RAATAVSLILAQEAGVTLTGTPTVPQPVNRPANQGGGYGPWLFLLLIFLFVMGSRRGRESLPLILMMLLSGSGRRGGGGD FDGFGSFGGGFGGFGGGSSGGGGASRGF >Mature_268_residues MINRDPCFIWPLRAVVFIFLTILAVLLNSRPSLAQDTFPSPQGAVNDFAGVISAADAVRMEDLAREVLDKTGTSVVVATV KSIGDNDLNDYVNRLYQAWGIGGKGEDRGVLIFLTFQERKIRIETGYGVEGILPDGRVGAILDQNVVPYLKKGEYSLGLV RAATAVSLILAQEAGVTLTGTPTVPQPVNRPANQGGGYGPWLFLLLIFLFVMGSRRGRESLPLILMMLLSGSGRRGGGGD FDGFGSFGGGFGGFGGGSSGGGGASRGF
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=201, Percent_Identity=22.3880597014925, Blast_Score=74, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 28235; Mature: 28235
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINRDPCFIWPLRAVVFIFLTILAVLLNSRPSLAQDTFPSPQGAVNDFAGVISAADAVRM CCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHH EDLAREVLDKTGTSVVVATVKSIGDNDLNDYVNRLYQAWGIGGKGEDRGVLIFLTFQERK HHHHHHHHHHCCCEEEEHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCE IRIETGYGVEGILPDGRVGAILDQNVVPYLKKGEYSLGLVRAATAVSLILAQEAGVTLTG EEEECCCCCCCCCCCCCCCHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEC TPTVPQPVNRPANQGGGYGPWLFLLLIFLFVMGSRRGRESLPLILMMLLSGSGRRGGGGD CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCC FDGFGSFGGGFGGFGGGSSGGGGASRGF CCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MINRDPCFIWPLRAVVFIFLTILAVLLNSRPSLAQDTFPSPQGAVNDFAGVISAADAVRM CCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHH EDLAREVLDKTGTSVVVATVKSIGDNDLNDYVNRLYQAWGIGGKGEDRGVLIFLTFQERK HHHHHHHHHHCCCEEEEHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCE IRIETGYGVEGILPDGRVGAILDQNVVPYLKKGEYSLGLVRAATAVSLILAQEAGVTLTG EEEECCCCCCCCCCCCCCCHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEC TPTVPQPVNRPANQGGGYGPWLFLLLIFLFVMGSRRGRESLPLILMMLLSGSGRRGGGGD CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCC FDGFGSFGGGFGGFGGGSSGGGGASRGF CCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]