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The map label for this gene is 85858443

Identifier: 85858443

GI number: 85858443

Start: 597704

End: 599095

Strand: Direct

Name: 85858443

Synonym: SYN_02247

Alternate gene names: NA

Gene position: 597704-599095 (Clockwise)

Preceding gene: 85858442

Following gene: 85858444

Centisome position: 18.8

GC content: 43.89

Gene sequence:

>1392_bases
ATGGCATTCTACCCTGTTCATAAGGAATTACAGAATATTTCCCAGAGCATGCCGCAAGGAAACTTCGGCCTCTGGTATAA
CAAATTCATCCCGCTCAGTGATGATGCATTCAAGCCGTCCGATGATAAAGGTTCTAATGGCAAAGGAGATGAAAACAGGC
CTGTGGATTATTATTTCGGACAATACAGCAAGCTGAGACTCAATGCTGCGGAAACGGCTGCAATACTTAAGCAGAAGCAT
GAAGACATGGATGATTTTTGCGCAAACTTCCCGCCGCAAAAATATGAGGAAATCGCCATTTGTGCGACTCTTGATTCTCC
CTTGATCACAGGCATCGGCGAATCGCACCCCCACGAGGTCAGCATGGTCTTCGATCACAATATGGGCATCCCCTATATAC
CGGCATCAGGCGTGAAAGGAATTGTCCGCTTTGCCCATACGATTTCTTTAATCCCTGAAGCAATGAATAAGGCTGAAGTT
ATTGATAACGTCCGGTTTGATGATGAAGCAGATTGGACATCTGTTCCGCACATGTTCGGCACCCAAAAAAATCGCGGAAA
TGTGATTTTCCTTGATGCCTATCCGGAGGATATCCCCGCCCTGCACATGGACATCATGAATCCACACTATTCACCCTATT
ATAGCGAAGGCAAACCTCCAGCCGACCACCACAATCCAACACCCATAAAGTTTCTTACCGTTGCCAAGGGAACTAAATTT
ATTTTCAGGGCTGTTGCAAAGAAAGAACAGAATCTTCCTCAAAAAATTAGAGTCGCATTTGCAGAAGCCCTTACGAAGGA
AGGCGTGGGCGCAAAGATCGCCCTCGGCTATGGCCGTTTCGTAATCGATGAAGATGGTCAGAAAGTTCTTTTGAAAAAGC
GCAAACAAAGGCATGAAGAAAAGAAAAGACGTCTTTCTCCTTGGCTCGACTATATTGAGCTAATCAATCAAGTTGGCGAC
TGGGGACAATTTAAACAAATCGTTCTTGATAATGAGAAGCTCGTTGAATACCGGAAAGAAATGGATGTGACTGAAGCCGT
CAGGATTAAAGCGCTGGAGATCCGGAATAAATGGCGTAAAAGTTGGGGTGCTTCGCGTGACGAACAAATAGCGACATGGT
TGCAACCAGCCGGAGTTGAATGGCCCTGCATTGTAGCAGGAATCGAAAACCCGGTTAAAGAAAAGTCAGCGGATTATGAA
AAAATTATGCAACTAATTGATTGGGGTGCATACAAATCAGCCGGTATCGACCTTTCAAAATTACCCTTAGATGCCCTTCA
ACTTCTCAAACAAAAAATGGAAGAATGGGGATGTTATTCTAAAAAGGCAAAAGAAGATAAAAAAACAGCCTTCAAGAAAG
TAAAGGATCTATTGAGACAGCATCAAAAATAA

Upstream 100 bases:

>100_bases
GATCAAAGACAGTATCTATCTGCCCAAAGTGAAACTTTATCCCTGCTCGAATGGATCAAGCGATTTGCCAATGCCGATTT
GACATAAGGGAGGATTTATT

Downstream 100 bases:

>100_bases
GAAGCAGAAATAACATCTGTTAAGCTTTTAAAAAGGAGCCCCCAATGCGTGACACGCTGATCTGCACCGTAGGCACCAGC
CTCAAAAACAACATCGCCGG

Product: cytoplasmic protein

Products: NA

Alternate protein names: CRISPR-Associated RAMP Cmr6 Family Protein; Cmr6 Family CRISPR-Associated RAMP Protein; Crispr-Associated Ramp Protein Cmr6 Family; Cytoplasmic Protein; CRISPR-Associated Cmr5 Family Protein; CRISPR-Associated Protein; Crispr-Associated Protein Cmr6 Family

Number of amino acids: Translated: 463; Mature: 462

Protein sequence:

>463_residues
MAFYPVHKELQNISQSMPQGNFGLWYNKFIPLSDDAFKPSDDKGSNGKGDENRPVDYYFGQYSKLRLNAAETAAILKQKH
EDMDDFCANFPPQKYEEIAICATLDSPLITGIGESHPHEVSMVFDHNMGIPYIPASGVKGIVRFAHTISLIPEAMNKAEV
IDNVRFDDEADWTSVPHMFGTQKNRGNVIFLDAYPEDIPALHMDIMNPHYSPYYSEGKPPADHHNPTPIKFLTVAKGTKF
IFRAVAKKEQNLPQKIRVAFAEALTKEGVGAKIALGYGRFVIDEDGQKVLLKKRKQRHEEKKRRLSPWLDYIELINQVGD
WGQFKQIVLDNEKLVEYRKEMDVTEAVRIKALEIRNKWRKSWGASRDEQIATWLQPAGVEWPCIVAGIENPVKEKSADYE
KIMQLIDWGAYKSAGIDLSKLPLDALQLLKQKMEEWGCYSKKAKEDKKTAFKKVKDLLRQHQK

Sequences:

>Translated_463_residues
MAFYPVHKELQNISQSMPQGNFGLWYNKFIPLSDDAFKPSDDKGSNGKGDENRPVDYYFGQYSKLRLNAAETAAILKQKH
EDMDDFCANFPPQKYEEIAICATLDSPLITGIGESHPHEVSMVFDHNMGIPYIPASGVKGIVRFAHTISLIPEAMNKAEV
IDNVRFDDEADWTSVPHMFGTQKNRGNVIFLDAYPEDIPALHMDIMNPHYSPYYSEGKPPADHHNPTPIKFLTVAKGTKF
IFRAVAKKEQNLPQKIRVAFAEALTKEGVGAKIALGYGRFVIDEDGQKVLLKKRKQRHEEKKRRLSPWLDYIELINQVGD
WGQFKQIVLDNEKLVEYRKEMDVTEAVRIKALEIRNKWRKSWGASRDEQIATWLQPAGVEWPCIVAGIENPVKEKSADYE
KIMQLIDWGAYKSAGIDLSKLPLDALQLLKQKMEEWGCYSKKAKEDKKTAFKKVKDLLRQHQK
>Mature_462_residues
AFYPVHKELQNISQSMPQGNFGLWYNKFIPLSDDAFKPSDDKGSNGKGDENRPVDYYFGQYSKLRLNAAETAAILKQKHE
DMDDFCANFPPQKYEEIAICATLDSPLITGIGESHPHEVSMVFDHNMGIPYIPASGVKGIVRFAHTISLIPEAMNKAEVI
DNVRFDDEADWTSVPHMFGTQKNRGNVIFLDAYPEDIPALHMDIMNPHYSPYYSEGKPPADHHNPTPIKFLTVAKGTKFI
FRAVAKKEQNLPQKIRVAFAEALTKEGVGAKIALGYGRFVIDEDGQKVLLKKRKQRHEEKKRRLSPWLDYIELINQVGDW
GQFKQIVLDNEKLVEYRKEMDVTEAVRIKALEIRNKWRKSWGASRDEQIATWLQPAGVEWPCIVAGIENPVKEKSADYEK
IMQLIDWGAYKSAGIDLSKLPLDALQLLKQKMEEWGCYSKKAKEDKKTAFKKVKDLLRQHQK

Specific function: Unknown

COG id: COG1604

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52941; Mature: 52810

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFYPVHKELQNISQSMPQGNFGLWYNKFIPLSDDAFKPSDDKGSNGKGDENRPVDYYFG
CCCCCHHHHHHHHHHHCCCCCCCCEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QYSKLRLNAAETAAILKQKHEDMDDFCANFPPQKYEEIAICATLDSPLITGIGESHPHEV
CCEEEEECHHHHHHHHHHHHCCHHHHHCCCCCCHHHCEEEEEECCCCHHHCCCCCCCCEE
SMVFDHNMGIPYIPASGVKGIVRFAHTISLIPEAMNKAEVIDNVRFDDEADWTSVPHMFG
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHC
TQKNRGNVIFLDAYPEDIPALHMDIMNPHYSPYYSEGKPPADHHNPTPIKFLTVAKGTKF
CCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHH
IFRAVAKKEQNLPQKIRVAFAEALTKEGVGAKIALGYGRFVIDEDGQKVLLKKRKQRHEE
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHH
KKRRLSPWLDYIELINQVGDWGQFKQIVLDNEKLVEYRKEMDVTEAVRIKALEIRNKWRK
HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
SWGASRDEQIATWLQPAGVEWPCIVAGIENPVKEKSADYEKIMQLIDWGAYKSAGIDLSK
HHCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHCCCHHHHHHHHHCCCCHHCCCCHHH
LPLDALQLLKQKMEEWGCYSKKAKEDKKTAFKKVKDLLRQHQK
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AFYPVHKELQNISQSMPQGNFGLWYNKFIPLSDDAFKPSDDKGSNGKGDENRPVDYYFG
CCCCHHHHHHHHHHHCCCCCCCCEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QYSKLRLNAAETAAILKQKHEDMDDFCANFPPQKYEEIAICATLDSPLITGIGESHPHEV
CCEEEEECHHHHHHHHHHHHCCHHHHHCCCCCCHHHCEEEEEECCCCHHHCCCCCCCCEE
SMVFDHNMGIPYIPASGVKGIVRFAHTISLIPEAMNKAEVIDNVRFDDEADWTSVPHMFG
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHC
TQKNRGNVIFLDAYPEDIPALHMDIMNPHYSPYYSEGKPPADHHNPTPIKFLTVAKGTKF
CCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHH
IFRAVAKKEQNLPQKIRVAFAEALTKEGVGAKIALGYGRFVIDEDGQKVLLKKRKQRHEE
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHH
KKRRLSPWLDYIELINQVGDWGQFKQIVLDNEKLVEYRKEMDVTEAVRIKALEIRNKWRK
HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
SWGASRDEQIATWLQPAGVEWPCIVAGIENPVKEKSADYEKIMQLIDWGAYKSAGIDLSK
HHCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHCCCHHHHHHHHHCCCCHHCCCCHHH
LPLDALQLLKQKMEEWGCYSKKAKEDKKTAFKKVKDLLRQHQK
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA