| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858405
Identifier: 85858405
GI number: 85858405
Start: 557194
End: 557745
Strand: Direct
Name: 85858405
Synonym: SYN_02287
Alternate gene names: NA
Gene position: 557194-557745 (Clockwise)
Preceding gene: 85858404
Following gene: 85858406
Centisome position: 17.53
GC content: 60.69
Gene sequence:
>552_bases ATGGGAATGATCCGCGGCATCGTGATGTCTGTTCTGGAAGGCATGATCAAGCGGTTTTCCGCCTCCGGTCGATCCGATGA AACGATCGAGGATCGGGAGTATCTCCAGCATTACGGCTTCACCTCCCGACCGAAGACAGGCGCGGAGCTGATCATCGTCA ACGAGGGCAATCACTACGTGGCCGTCGCTTCCGACGACCGCCGTTACCGGGTCGCCGTCGAGGACGGGGAAGTCTGTCTC TATACGGATGAAGGCGACAGGATCCACTTCAAGCGGAACAGGACCATCGAGATCGTCAGCGGCAACAGGCTCAAGGCGAC CGTGGAAAATGACGTGGAAATCACCAGCAAAACGGCCCTGGTGACCGCGTCCGTCAGTTGTCAGGTGAACAGCCCCCTGA TCAACCTGGGCGGCGACCGCGGCGGGTTGAAGGCGATCTGCGACGAGCGGCTGATCTCCTGGCTCGGTTCCCACACTCAC GACGGGGGGGCAACCCCGGATCAATCCCTGACGGCGTCCGATGTCTGCACGGCCATCACGAAGGCGGGATAA
Upstream 100 bases:
>100_bases ATCTCATCTACGGAAGGACCTTCGAACTGGACAAGAATCTGGGGCCGACAACGCGGCTGAAGCTCGGCCGGGTAGGCCTT ATATAAAGGAAGGATGACGT
Downstream 100 bases:
>100_bases AACGGGCATGAAATGGACTTCAAAATAGAAATCGACAATACGACCGGGCTGGCCGCCATGACGTTCGACAAGGCGGACAC CATCATGAACAATGTCTGGC
Product: mu-like prophage Flumu protein gp45
Products: NA
Alternate protein names: Phage Assembly Protein; Prophage MuSo2 Baseplate Assembly Protein V; Mu-Like Phage Assembly Protein Gp; Mu-Like Prophage Flumu Protein Gp; Mu-Like Prophage Protein Gp
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MGMIRGIVMSVLEGMIKRFSASGRSDETIEDREYLQHYGFTSRPKTGAELIIVNEGNHYVAVASDDRRYRVAVEDGEVCL YTDEGDRIHFKRNRTIEIVSGNRLKATVENDVEITSKTALVTASVSCQVNSPLINLGGDRGGLKAICDERLISWLGSHTH DGGATPDQSLTASDVCTAITKAG
Sequences:
>Translated_183_residues MGMIRGIVMSVLEGMIKRFSASGRSDETIEDREYLQHYGFTSRPKTGAELIIVNEGNHYVAVASDDRRYRVAVEDGEVCL YTDEGDRIHFKRNRTIEIVSGNRLKATVENDVEITSKTALVTASVSCQVNSPLINLGGDRGGLKAICDERLISWLGSHTH DGGATPDQSLTASDVCTAITKAG >Mature_182_residues GMIRGIVMSVLEGMIKRFSASGRSDETIEDREYLQHYGFTSRPKTGAELIIVNEGNHYVAVASDDRRYRVAVEDGEVCLY TDEGDRIHFKRNRTIEIVSGNRLKATVENDVEITSKTALVTASVSCQVNSPLINLGGDRGGLKAICDERLISWLGSHTHD GGATPDQSLTASDVCTAITKAG
Specific function: Unknown
COG id: COG4384
COG function: function code S; Mu-like prophage protein gp45
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19920; Mature: 19788
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMIRGIVMSVLEGMIKRFSASGRSDETIEDREYLQHYGFTSRPKTGAELIIVNEGNHYV CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEE AVASDDRRYRVAVEDGEVCLYTDEGDRIHFKRNRTIEIVSGNRLKATVENDVEITSKTAL EEECCCCEEEEEEECCCEEEEECCCCEEEEECCCEEEEEECCEEEEEECCCEEEECCEEE VTASVSCQVNSPLINLGGDRGGLKAICDERLISWLGSHTHDGGATPDQSLTASDVCTAIT EEEEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH KAG CCC >Mature Secondary Structure GMIRGIVMSVLEGMIKRFSASGRSDETIEDREYLQHYGFTSRPKTGAELIIVNEGNHYV CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEE AVASDDRRYRVAVEDGEVCLYTDEGDRIHFKRNRTIEIVSGNRLKATVENDVEITSKTAL EEECCCCEEEEEEECCCEEEEECCCCEEEEECCCEEEEEECCEEEEEECCCEEEECCEEE VTASVSCQVNSPLINLGGDRGGLKAICDERLISWLGSHTHDGGATPDQSLTASDVCTAIT EEEEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH KAG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA