| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858378
Identifier: 85858378
GI number: 85858378
Start: 536807
End: 537721
Strand: Direct
Name: 85858378
Synonym: SYN_02313
Alternate gene names: NA
Gene position: 536807-537721 (Clockwise)
Preceding gene: 85858377
Following gene: 85858379
Centisome position: 16.88
GC content: 61.97
Gene sequence:
>915_bases TTGGATCGAATGGTCCGAGTTGCCGGGATACCGCGAGGTCCTGGGCGCTACCGTAGGTGCGTAGGAACAACTCGGGCTTT TTTGCGCCCCAACCCTAAAACTTACGGAGGAAGAACCATGAGCAACAAGCACAGCATCGCCCCCGAGCACCCCAGCCATC CGTCTTTTGATTCCCTCAACGAACTCTGCCGTCCCCTCTTCGGCGGCAACGCCTTCGGCGATCCGCGGGAGGAGCAGGCC GTCCATCTCCTGCCTGGCCGGGAACCCTTCATGCTGGACCGGCAGGTCGCCGCCGTCTACGGCGTTCCGACAAGGCGGTT GATGGAGCAGGTCCGGCGGAACGCCCAGCACTTCGATTCCGACATGCTCTTCCAGCTCACCGCGGAAGAGCTGAAAAGCC TCCGGTCGCAAAATGCGACCGCCCCCGTCAACCAGTATCTGCCCTACGGCTTCACCCAAATCGGGGCGAACCATGTGGCC TTCTTCCTCAAGTCCGAACAGGCCCTGGAGCGTTCCAAGAAAATCAGCCGGTACTTCGTCGCCTTCGAGAACCTCCTGCG CTCCGCAAAAGGACGGTCGGAGCTGGGGAAACTGGCCCGGTCGCAACCGGAGACCGCCCCGCAAACCGGCGCCGTTCCTG ACGGCAAGACGCTGATGGACACGGACCGGGTGATCGAAATGTATGAGCTCATCATTGCCATGCAGAAGGAGAAGATCGAG CATCTGAAGTCGGGGGCCGGTTCCCGCAAGGCGGTCAGCCTGGAAGAGGTGCGGCGCATCCTGAAGCTGGCTGCCGCCGG TTACGGTTACGCGGACATCGCCAAGGCTGTGGGCCGGAAGAAAGAGACCGTGGAGACCGTACTGCGTCGGGAAAGGCAGC GTCAGGCGTCCCTGAAGAAGGAGGCCCATCAATGA
Upstream 100 bases:
>100_bases CAAATTCAAAGGATTTGGGGAAGCTCTGGCTTCCTAAATATCCTACGGGGCTGCCCCGGCCTCAAGTGCGACCACGCATG GCGCGAAAGGGGGTTTTTAT
Downstream 100 bases:
>100_bases ACACGCTGTTCTGCCCCTGGGCTCCCGTCTGGGACGCCCACATCGAGGTTGCCCGACTGCGGGGCGTCGTGGATCTGATT GCCATCCTTACCGGCCCCGT
Product: cytoplasmic protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MDRMVRVAGIPRGPGRYRRCVGTTRAFLRPNPKTYGGRTMSNKHSIAPEHPSHPSFDSLNELCRPLFGGNAFGDPREEQA VHLLPGREPFMLDRQVAAVYGVPTRRLMEQVRRNAQHFDSDMLFQLTAEELKSLRSQNATAPVNQYLPYGFTQIGANHVA FFLKSEQALERSKKISRYFVAFENLLRSAKGRSELGKLARSQPETAPQTGAVPDGKTLMDTDRVIEMYELIIAMQKEKIE HLKSGAGSRKAVSLEEVRRILKLAAAGYGYADIAKAVGRKKETVETVLRRERQRQASLKKEAHQ
Sequences:
>Translated_304_residues MDRMVRVAGIPRGPGRYRRCVGTTRAFLRPNPKTYGGRTMSNKHSIAPEHPSHPSFDSLNELCRPLFGGNAFGDPREEQA VHLLPGREPFMLDRQVAAVYGVPTRRLMEQVRRNAQHFDSDMLFQLTAEELKSLRSQNATAPVNQYLPYGFTQIGANHVA FFLKSEQALERSKKISRYFVAFENLLRSAKGRSELGKLARSQPETAPQTGAVPDGKTLMDTDRVIEMYELIIAMQKEKIE HLKSGAGSRKAVSLEEVRRILKLAAAGYGYADIAKAVGRKKETVETVLRRERQRQASLKKEAHQ >Mature_304_residues MDRMVRVAGIPRGPGRYRRCVGTTRAFLRPNPKTYGGRTMSNKHSIAPEHPSHPSFDSLNELCRPLFGGNAFGDPREEQA VHLLPGREPFMLDRQVAAVYGVPTRRLMEQVRRNAQHFDSDMLFQLTAEELKSLRSQNATAPVNQYLPYGFTQIGANHVA FFLKSEQALERSKKISRYFVAFENLLRSAKGRSELGKLARSQPETAPQTGAVPDGKTLMDTDRVIEMYELIIAMQKEKIE HLKSGAGSRKAVSLEEVRRILKLAAAGYGYADIAKAVGRKKETVETVLRRERQRQASLKKEAHQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34233; Mature: 34233
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRMVRVAGIPRGPGRYRRCVGTTRAFLRPNPKTYGGRTMSNKHSIAPEHPSHPSFDSLN CCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH ELCRPLFGGNAFGDPREEQAVHLLPGREPFMLDRQVAAVYGVPTRRLMEQVRRNAQHFDS HHHHHHHCCCCCCCCCHHCEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC DMLFQLTAEELKSLRSQNATAPVNQYLPYGFTQIGANHVAFFLKSEQALERSKKISRYFV HHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH AFENLLRSAKGRSELGKLARSQPETAPQTGAVPDGKTLMDTDRVIEMYELIIAMQKEKIE HHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH HLKSGAGSRKAVSLEEVRRILKLAAAGYGYADIAKAVGRKKETVETVLRRERQRQASLKK HHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH EAHQ HCCC >Mature Secondary Structure MDRMVRVAGIPRGPGRYRRCVGTTRAFLRPNPKTYGGRTMSNKHSIAPEHPSHPSFDSLN CCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH ELCRPLFGGNAFGDPREEQAVHLLPGREPFMLDRQVAAVYGVPTRRLMEQVRRNAQHFDS HHHHHHHCCCCCCCCCHHCEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC DMLFQLTAEELKSLRSQNATAPVNQYLPYGFTQIGANHVAFFLKSEQALERSKKISRYFV HHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH AFENLLRSAKGRSELGKLARSQPETAPQTGAVPDGKTLMDTDRVIEMYELIIAMQKEKIE HHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH HLKSGAGSRKAVSLEEVRRILKLAAAGYGYADIAKAVGRKKETVETVLRRERQRQASLKK HHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH EAHQ HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA