| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85857997
Identifier: 85857997
GI number: 85857997
Start: 160754
End: 161728
Strand: Direct
Name: 85857997
Synonym: SYN_01959
Alternate gene names: NA
Gene position: 160754-161728 (Clockwise)
Preceding gene: 85857996
Following gene: 85857998
Centisome position: 5.06
GC content: 53.85
Gene sequence:
>975_bases TTGGGGGTATCCAAAAGGACGGTCATGAGATACCAAACTTGCCGGGAGCCTGGATCGCTTTCTGCCAGCGATAAGTTCAA ATCGGTAGAGGCTGCACTCGAAAGTCATGTCAAAGAAGAGGAAGCCAGATACAGCGGAAAAGGCCGGGGAGATGGCAGCC TGTGGCATCATCTGGTTCGGGTGGCGCGGTTGGCCGAAAAGCTCGGGCGGAGTGAAGGGCTCGATCCTGCAACCTGCAGA CTGGCAGGCCTGTTTCATGACGCCGGCAAATTCTCGGGCGGAACTTATCATCAGGACGACCGACCGGAAGAAGAGCGTTC CGTGGATATATTGGTGGAGCTTGCGGGTAAGCATGATTTAGATCGGGATATTGTCGATCGGATCGCCAGATCCTTCCAAC AGCTATACCGGGATGGCGAAAATCAAACTCCTTTGACCCGGGTTTTGTTCGATGCCGATAATCTGGACAAGCTCGGATTC CTCGGAATCGCCAACTATTTTATCAAGACCGGTCTCCGGGGCAAAGGCGTGTCTGCGAACATGCTCTATCAATTAACCGC GGAACTGACCTATGCGCGCCACGCAGCGGATTGTATGGCAACGCCGGCAGGCCGCGAGCTGGCCCTCCGCAAGGCGCCGG AAACCTATCGATTCATTTTGGATCTCCTGCAATCGCTGCGAGACGATGGAATCTTTGATTTTAAAGTCGAGGAAGTCATG TTCGACCAACTGCTCCTCGACGTTGTATCCCCTTACTCATGTGAGTGTCGGGGCACGCTGGAACGCCGTCTCTGGAACGT CAGGGGCATCAAATGCCTGGAAATCCATCTCGAGCATTCCTGCCCGAGATGTGAGGCACGCCATGAGATTCGTTTTTGCA CTCCGAAGCTTCGAACCCAGGGGGAAAAGAATACAGGGGATCTTTTCCGAACTTCGCAACTTGATATCCGGCAGGCAGCT GACAGTTACTTTTGA
Upstream 100 bases:
>100_bases GTCGATTTTATTCATAAAATAGTTAAAATTCAGCTTTACGGTGTGAAGGAAAAGATGTAAATGTTCTACATGTGACGCCG GTCGTTATTGACGCAATGAA
Downstream 100 bases:
>100_bases GGAGCATGCAAAATGGTCATCGTTTCAAAAGATCCGATTGATCCGGCGACGATGTTTGAAAAAATCGAAAAATCCAGAGG CGGCAGCGTCCTGTTGCACT
Product: phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MGVSKRTVMRYQTCREPGSLSASDKFKSVEAALESHVKEEEARYSGKGRGDGSLWHHLVRVARLAEKLGRSEGLDPATCR LAGLFHDAGKFSGGTYHQDDRPEEERSVDILVELAGKHDLDRDIVDRIARSFQQLYRDGENQTPLTRVLFDADNLDKLGF LGIANYFIKTGLRGKGVSANMLYQLTAELTYARHAADCMATPAGRELALRKAPETYRFILDLLQSLRDDGIFDFKVEEVM FDQLLLDVVSPYSCECRGTLERRLWNVRGIKCLEIHLEHSCPRCEARHEIRFCTPKLRTQGEKNTGDLFRTSQLDIRQAA DSYF
Sequences:
>Translated_324_residues MGVSKRTVMRYQTCREPGSLSASDKFKSVEAALESHVKEEEARYSGKGRGDGSLWHHLVRVARLAEKLGRSEGLDPATCR LAGLFHDAGKFSGGTYHQDDRPEEERSVDILVELAGKHDLDRDIVDRIARSFQQLYRDGENQTPLTRVLFDADNLDKLGF LGIANYFIKTGLRGKGVSANMLYQLTAELTYARHAADCMATPAGRELALRKAPETYRFILDLLQSLRDDGIFDFKVEEVM FDQLLLDVVSPYSCECRGTLERRLWNVRGIKCLEIHLEHSCPRCEARHEIRFCTPKLRTQGEKNTGDLFRTSQLDIRQAA DSYF >Mature_323_residues GVSKRTVMRYQTCREPGSLSASDKFKSVEAALESHVKEEEARYSGKGRGDGSLWHHLVRVARLAEKLGRSEGLDPATCRL AGLFHDAGKFSGGTYHQDDRPEEERSVDILVELAGKHDLDRDIVDRIARSFQQLYRDGENQTPLTRVLFDADNLDKLGFL GIANYFIKTGLRGKGVSANMLYQLTAELTYARHAADCMATPAGRELALRKAPETYRFILDLLQSLRDDGIFDFKVEEVMF DQLLLDVVSPYSCECRGTLERRLWNVRGIKCLEIHLEHSCPRCEARHEIRFCTPKLRTQGEKNTGDLFRTSQLDIRQAAD SYF
Specific function: Unknown
COG id: COG1418
COG function: function code R; Predicted HD superfamily hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36767; Mature: 36636
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVSKRTVMRYQTCREPGSLSASDKFKSVEAALESHVKEEEARYSGKGRGDGSLWHHLVR CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH VARLAEKLGRSEGLDPATCRLAGLFHDAGKFSGGTYHQDDRPEEERSVDILVELAGKHDL HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCC DRDIVDRIARSFQQLYRDGENQTPLTRVLFDADNLDKLGFLGIANYFIKTGLRGKGVSAN CHHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHH MLYQLTAELTYARHAADCMATPAGRELALRKAPETYRFILDLLQSLRDDGIFDFKVEEVM HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCEEEHHHHHH FDQLLLDVVSPYSCECRGTLERRLWNVRGIKCLEIHLEHSCPRCEARHEIRFCTPKLRTQ HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEECCHHHHCC GEKNTGDLFRTSQLDIRQAADSYF CCCCCCCHHCCHHHHHHHHHCCCC >Mature Secondary Structure GVSKRTVMRYQTCREPGSLSASDKFKSVEAALESHVKEEEARYSGKGRGDGSLWHHLVR CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH VARLAEKLGRSEGLDPATCRLAGLFHDAGKFSGGTYHQDDRPEEERSVDILVELAGKHDL HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCC DRDIVDRIARSFQQLYRDGENQTPLTRVLFDADNLDKLGFLGIANYFIKTGLRGKGVSAN CHHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHH MLYQLTAELTYARHAADCMATPAGRELALRKAPETYRFILDLLQSLRDDGIFDFKVEEVM HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCEEEHHHHHH FDQLLLDVVSPYSCECRGTLERRLWNVRGIKCLEIHLEHSCPRCEARHEIRFCTPKLRTQ HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEECCHHHHCC GEKNTGDLFRTSQLDIRQAADSYF CCCCCCCHHCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA