Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85857965

Identifier: 85857965

GI number: 85857965

Start: 123516

End: 124046

Strand: Direct

Name: 85857965

Synonym: SYN_02216

Alternate gene names: NA

Gene position: 123516-124046 (Clockwise)

Preceding gene: 85857961

Following gene: 85857967

Centisome position: 3.89

GC content: 55.18

Gene sequence:

>531_bases
ATGAAAAAATTACTGGCGGTTATGGCCGTGTTCTTTCTGGTTGCGGTGATTGCCGTTCCCTCGTACGCCCGGGGATGGCG
AGGTCATGGAGACGGTCCCTGCAGGGATGTGACCAAAATTCCCGGACTGAACCTGACGGTTGAACAGAAGACGAAGCTGG
CGGAGATGCAGCAGGCTCATCAGAAGGATGTCAAGCCTCTGCACGACAAAATTTTCATCCGGAAAGGCGACCTGAGGCTG
CTCTGGCAGGAAAAGAGCCTGGATGAGGCGAAAATCAGGGCTACAGAGAAGGAAATCCGGAGTTTGAGGGATCAGCTCCA
TGAAAAAAGGACCAGCTATAAATGGGCGGTCTATAAAATGCTGACTCCGGAGCAGCGCGAGAAAATCAGGGATTTCGGTC
CGTCAGGCTGCCGTTTAGGCTCCGATAAGAGACCCGGTCAAGGGTACGGAAGAGGCCCCGGCGACGGATTCGGTCCGGGT
TATGGCCCCCGCATGATGAGTCCGGGAGCGGACAGGACAGGCAACAAGTAA

Upstream 100 bases:

>100_bases
ATAATCCAGTCATTCAGCTATGTTACTCGTAAATTTTCGATATGGCACGGCTGTTGCCCTGTAAAGAATAAAAATCAATC
AAGAAAAGGAGAAGAAAATC

Downstream 100 bases:

>100_bases
ATAATTAAACAACGATCGCAATCTGGGGGGAGTTCATCGATACTTCCCCACCATCCTTCGCGAGCCGCCGGGGCAGTCGG
AATCATCGCCCTGGCGGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MKKLLAVMAVFFLVAVIAVPSYARGWRGHGDGPCRDVTKIPGLNLTVEQKTKLAEMQQAHQKDVKPLHDKIFIRKGDLRL
LWQEKSLDEAKIRATEKEIRSLRDQLHEKRTSYKWAVYKMLTPEQREKIRDFGPSGCRLGSDKRPGQGYGRGPGDGFGPG
YGPRMMSPGADRTGNK

Sequences:

>Translated_176_residues
MKKLLAVMAVFFLVAVIAVPSYARGWRGHGDGPCRDVTKIPGLNLTVEQKTKLAEMQQAHQKDVKPLHDKIFIRKGDLRL
LWQEKSLDEAKIRATEKEIRSLRDQLHEKRTSYKWAVYKMLTPEQREKIRDFGPSGCRLGSDKRPGQGYGRGPGDGFGPG
YGPRMMSPGADRTGNK
>Mature_176_residues
MKKLLAVMAVFFLVAVIAVPSYARGWRGHGDGPCRDVTKIPGLNLTVEQKTKLAEMQQAHQKDVKPLHDKIFIRKGDLRL
LWQEKSLDEAKIRATEKEIRSLRDQLHEKRTSYKWAVYKMLTPEQREKIRDFGPSGCRLGSDKRPGQGYGRGPGDGFGPG
YGPRMMSPGADRTGNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19848; Mature: 19848

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLAVMAVFFLVAVIAVPSYARGWRGHGDGPCRDVTKIPGLNLTVEQKTKLAEMQQAH
CHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHCCCCCEEHHHHHHHHHHHHHH
QKDVKPLHDKIFIRKGDLRLLWQEKSLDEAKIRATEKEIRSLRDQLHEKRTSYKWAVYKM
HHCCCHHHHHHEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
LTPEQREKIRDFGPSGCRLGSDKRPGQGYGRGPGDGFGPGYGPRMMSPGADRTGNK
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKLLAVMAVFFLVAVIAVPSYARGWRGHGDGPCRDVTKIPGLNLTVEQKTKLAEMQQAH
CHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHCCCCCEEHHHHHHHHHHHHHH
QKDVKPLHDKIFIRKGDLRLLWQEKSLDEAKIRATEKEIRSLRDQLHEKRTSYKWAVYKM
HHCCCHHHHHHEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
LTPEQREKIRDFGPSGCRLGSDKRPGQGYGRGPGDGFGPGYGPRMMSPGADRTGNK
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA