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The map label for this gene is yaaH [H]

Identifier: 85857946

GI number: 85857946

Start: 103977

End: 104771

Strand: Direct

Name: yaaH [H]

Synonym: SYN_03234

Alternate gene names: 85857946

Gene position: 103977-104771 (Clockwise)

Preceding gene: 85857942

Following gene: 85857948

Centisome position: 3.27

GC content: 52.33

Gene sequence:

>795_bases
TTGAGCGCGATTATTGTAAGTCGATATGATCATCATACTTGTTCGGAATTATCAATTTACTTTTACTGCAAGGGCATTCT
CATCCGAGCCATCCGCAGGCAAACCGGCGGAACGGATTGCCATGGGATCTATTTTTCGGGACCGCTTTTCATTGACATGC
ATTCCGAGTTTGCCTATAGTCCCTGCCCGGAAAAGGAGGGGGAAACAAATCAAGCGCAAAGGAGGTTTCATCATGTCGGA
CAATTTAGCGAATCCTGCACCATTGGGTCTCATGGGCTTCGGAATGACAACGGTTCTTTTAAACCTGCACAATGCCGGGC
TGTTCGAGTTAGGCGCTGGAATCCTGGCCATGGGCATCTTTTATGGCGGCCTGGCCAGGTCATCGCCGGGATCATGGAGT
TCAAGAAGGGCAATACCTTCGGTACGACGGCTTTCACGTCCTACGGTCTTTTCTGGCTCACCCTGGTATTTCTCGTCTAC
TTCAACGGACAACTCGGCATGACCAAAAACAGTGAGGCCTTTATGACCGCCTATCTGTTCATGTGGGGGCTGTTTACCTT
TTTCATGTGGATCGGAACCTGGAAGGCCACCCGTGTGCTTCAGGCGGTTTTTTTAACCCTGACCATACTTTTCTGGATGC
TGGCCGCCCGGGATGGCTTCGGATGGAAAGGGACGTGGGCTGTTCTTACGGGATGGGAAGGGGTCTTCTGCGGCTCCCTG
GCCATTTACTGCGCCATGGCCCAGGTGCTCAATGAAAGCTTCGGCCGGATCGTGCTGCCCCTCGGAGCGAAGTAA

Upstream 100 bases:

>100_bases
TTAAGGCGCCGCCGGGATGCTTCACGTAAACGAACAGGACGTCCGGCGCAATGAGGATTTCCTTATCCAGGCGGTTGCCG
CGGTACGGGGTTGAACAACA

Downstream 100 bases:

>100_bases
TTCCTGCGGATTATCTTTTTTCTGATATTTCCTCTTGTCATAGAGAAATCATGGTAATAGAGTAGTATGAACTAAGAAGC
AGCGCTTTCGGCAGCCATGT

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MSAIIVSRYDHHTCSELSIYFYCKGILIRAIRRQTGGTDCHGIYFSGPLFIDMHSEFAYSPCPEKEGETNQAQRRFHHVG
QFSESCTIGSHGLRNDNGSFKPAQCRAVRVRRWNPGHGHLLWRPGQVIAGIMEFKKGNTFGTTAFTSYGLFWLTLVFLVY
FNGQLGMTKNSEAFMTAYLFMWGLFTFFMWIGTWKATRVLQAVFLTLTILFWMLAARDGFGWKGTWAVLTGWEGVFCGSL
AIYCAMAQVLNESFGRIVLPLGAK

Sequences:

>Translated_264_residues
MSAIIVSRYDHHTCSELSIYFYCKGILIRAIRRQTGGTDCHGIYFSGPLFIDMHSEFAYSPCPEKEGETNQAQRRFHHVG
QFSESCTIGSHGLRNDNGSFKPAQCRAVRVRRWNPGHGHLLWRPGQVIAGIMEFKKGNTFGTTAFTSYGLFWLTLVFLVY
FNGQLGMTKNSEAFMTAYLFMWGLFTFFMWIGTWKATRVLQAVFLTLTILFWMLAARDGFGWKGTWAVLTGWEGVFCGSL
AIYCAMAQVLNESFGRIVLPLGAK
>Mature_263_residues
SAIIVSRYDHHTCSELSIYFYCKGILIRAIRRQTGGTDCHGIYFSGPLFIDMHSEFAYSPCPEKEGETNQAQRRFHHVGQ
FSESCTIGSHGLRNDNGSFKPAQCRAVRVRRWNPGHGHLLWRPGQVIAGIMEFKKGNTFGTTAFTSYGLFWLTLVFLVYF
NGQLGMTKNSEAFMTAYLFMWGLFTFFMWIGTWKATRVLQAVFLTLTILFWMLAARDGFGWKGTWAVLTGWEGVFCGSLA
IYCAMAQVLNESFGRIVLPLGAK

Specific function: Unknown

COG id: COG1584

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GPR1/FUN34/yaaH family [H]

Homologues:

Organism=Escherichia coli, GI1786191, Length=140, Percent_Identity=53.5714285714286, Blast_Score=134, Evalue=7e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000791 [H]

Pfam domain/function: PF01184 Grp1_Fun34_YaaH [H]

EC number: NA

Molecular weight: Translated: 29904; Mature: 29773

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIIVSRYDHHTCSELSIYFYCKGILIRAIRRQTGGTDCHGIYFSGPLFIDMHSEFAYS
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEECCCCCCC
PCPEKEGETNQAQRRFHHVGQFSESCTIGSHGLRNDNGSFKPAQCRAVRVRRWNPGHGHL
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEECCCCCCCE
LWRPGQVIAGIMEFKKGNTFGTTAFTSYGLFWLTLVFLVYFNGQLGMTKNSEAFMTAYLF
EECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
MWGLFTFFMWIGTWKATRVLQAVFLTLTILFWMLAARDGFGWKGTWAVLTGWEGVFCGSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHH
AIYCAMAQVLNESFGRIVLPLGAK
HHHHHHHHHHHHCCCEEEEECCCC
>Mature Secondary Structure 
SAIIVSRYDHHTCSELSIYFYCKGILIRAIRRQTGGTDCHGIYFSGPLFIDMHSEFAYS
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEECCCCCCC
PCPEKEGETNQAQRRFHHVGQFSESCTIGSHGLRNDNGSFKPAQCRAVRVRRWNPGHGHL
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEECCCCCCCE
LWRPGQVIAGIMEFKKGNTFGTTAFTSYGLFWLTLVFLVYFNGQLGMTKNSEAFMTAYLF
EECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
MWGLFTFFMWIGTWKATRVLQAVFLTLTILFWMLAARDGFGWKGTWAVLTGWEGVFCGSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHH
AIYCAMAQVLNESFGRIVLPLGAK
HHHHHHHHHHHHCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]